nLs.2.1.2.g07238 (Litomosoides sigmodontis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 nLs.2.1.2.g07238 T336712_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t07238-RA Sox 563 629

Links

Other Sox family TFs
Other Litomosoides sigmodontis TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0001798401 Ascaris lumbricoides ALUE_0001798401 N 0.559
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.460
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.470
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.470
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.470
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.496
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.470
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.470
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.426
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I 0.415
Aqu1.209664 Amphimedon queenslandica Aqu1.209664 N 0.416
ASIM_0000114801 Anisakis simplex ASIM_0000114801 N 0.559
ASU_13985 Ascaris suum ASU_13985 N 0.559
Bm2524 Brugia malayi Bm2524 N 0.702
Bm6643 Brugia malayi Bm6643 N 0.418
Bm8632 Brugia malayi Bm8632 N 0.485
BXY_0253100 Bursaphelenchus xylophilus BXY_0253100 N 0.455
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.443
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.442
CapteG172235 Capitella teleta CapteG172235 I 0.417
CBG04066 Caenorhabditis briggsae CBG04066 N 0.416
CBG09136 Caenorhabditis briggsae CBG09136 N 0.490
CBN25379 Caenorhabditis brenneri CBN25379 I 0.495
CJA19030 Caenorhabditis japonica CJA19030 N 0.490
CRE03995 Caenorhabditis remanei CRE03995 N 0.427
D918_00495 Trichuris suis D918_00495 N 0.415
DRE_06603 Drechslerella stenobrocha DRE_06603 I 0.435
EEL_0000829801 Elaeophora elaphi EEL_0000829801 N 0.708
EVEC_0000195001 Enterobius vermicularis EVEC_0000195001 N 0.450
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.440
GD25171 Drosophila simulans FBgn0196483 I 0.427
GF11622 Drosophila ananassae FBgn0088662 I 0.427
GG20749 Drosophila erecta FBgn0112936 I 0.427
GH20784 Drosophila grimshawi FBgn0128247 I 0.432
GI20867 Drosophila mojavensis FBgn0143601 I 0.432
GJ20604 Drosophila virilis FBgn0207743 I 0.432
GK15658 Drosophila willistoni FBgn0217663 I 0.427
GL17523 Drosophila persimilis FBgn0155126 I 0.440
GM15692 Drosophila sechellia FBgn0170608 I 0.427
GPUH_0001272801 Gongylonema pulchrum GPUH_0001272801 N 0.695
GPUH_0001539601 Gongylonema pulchrum GPUH_0001539601 N 0.695
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.438
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.495
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.495
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.446
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.497
HmgZ Drosophila melanogaster FBgn0010228 I 0.427
HmgZ Drosophila yakuba FBgn0068145 I 0.427
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.469
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.456
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.495
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.438
L596_g20063 Steinernema carpocapsae L596_g20063 N 0.519
L889_g13720 Steinernema feltiae L889_g13720 N 0.504
L889_g16198 Steinernema feltiae L889_g16198 N 0.440
L889_g29516 Steinernema feltiae L889_g29516 N 0.465
L892_g15959 Steinernema scapterisci L892_g15959 N 0.491
L892_g23618 Steinernema scapterisci L892_g23618 N 0.440
L892_g26355 Steinernema scapterisci L892_g26355 N 0.491
L893_g23503 Steinernema glaseri L893_g23503 N 0.440
L898_g26664 Steinernema monticolum L898_g26664 N 0.483
L898_g7743 Steinernema monticolum L898_g7743 N 0.440
LOAG_04347 Loa loa LOAG_04347 N 0.708
LOAG_08062 Loa loa LOAG_08062 N 0.485
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.517
MDOA014797 Musca domestica MDOA014797 I 0.426
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.517
Minc03634 Meloidogyne incognita Minc03634 N 0.517
Minc04648 Meloidogyne incognita Minc04648 N 0.517
nAv.1.0.1.g03971 Acanthocheilonema viteae nAv.1.0.1.g03971 N 0.708
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.485
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.526
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.428
nDi.2.2.2.g07477 Dirofilaria immitis nDi.2.2.2.g07477 N 0.701
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.485
NECAME_16525 Necator americanus NECAME_16525 N 0.496
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.428
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.485
nOo.2.0.1.g02324 Onchocerca ochengi nOo.2.0.1.g02324 N 0.695
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.485
OFLC_0000770701 Onchocerca flexuosa OFLC_0000770701 N 0.708
PPA02261 Pristionchus pacificus PPA02261 N 0.442
PPA06513 Pristionchus pacificus PPA06513 N 0.504
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.432
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.491
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.446
RO3G_09728 Rhizopus oryzae RO3G_09728 I 0.430
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.469
RSKR_0000171200 Rhabditophanes kr3021 RSKR_0000171200 N 0.439
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.459
RSKR_0000472700 Rhabditophanes kr3021 RSKR_0000472700 N 0.433
RSKR_0000540800 Rhabditophanes kr3021 RSKR_0000540800 N 0.439
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.518
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.458
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.442
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.504
SMUV_0000856901 Syphacia muris SMUV_0000856901 N 0.463
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.446
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.485
SSLN_0000125101 Schistocephalus solidus SSLN_0000125101 N 0.429
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.446
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.485
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.485
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.446
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.496
TCLT_0000097001 Thelazia callipaeda TCLT_0000097001 N 0.667
TCNE_0001783901 Toxocara canis TCNE_0001783901 N 0.559
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.485
WBGene00244511 Onchocerca volvulus WBGene00244511 N 0.695
WUBG_03677 Wuchereria bancrofti WUBG_03677 N 0.708