ARF10 (Arabidopsis thaliana)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 AT2G28350 T018418_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.885 0.885
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G28350.1 B3 115 217
AT2G28350.2 B3 115 217

Links

Other B3 family TFs
Other Arabidopsis thaliana TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_32978 Aegilops tauschii F775_32978 I 0.896
AMTR_s00148p00046020 Amborella trichopoda AMTR_s00148p00046020 I 0.806
AMTR_s00155p00082980 Amborella trichopoda AMTR_s00155p00082980 I 0.865
Aquca_030_00152 Aquilegia coerulea Aquca_030_00152 I 0.938
ARF10 Arabidopsis lyrata fgenesh2_kg.4__731__AT2G28350.1 I 0.990
ARF16 Arabidopsis lyrata scaffold_701217.1 I 0.885
ARF16 Arabidopsis thaliana AT4G30080 D 0.885
Bostr.27991s0089 Boechera stricta Bostr.27991s0089 I 0.990
Bostr.7867s0859 Boechera stricta Bostr.7867s0859 I 0.885
BRADI1G33160 Brachypodium distachyon BRADI1G33160 I 0.887
BRADI3G28950 Brachypodium distachyon BRADI3G28950 I 0.897
BRADI3G49320 Brachypodium distachyon BRADI3G49320 I 0.885
BRADI5G15904 Brachypodium distachyon BRADI5G15904 I 0.710
Bo1g014600 Brassica oleracea Bo1g014600 I 0.876
Bo4g071620 Brassica oleracea Bo4g071620 I 0.969
Bo7g114200 Brassica oleracea Bo7g114200 I 0.896
Bra011162 Brassica rapa Bra011162 I 0.887
Bra011955 Brassica rapa Bra011955 I 0.979
Bra024109 Brassica rapa Bra024109 I 0.876
PK10136.1 Cannabis sativa PK10136.1 I 0.708
PK13064.1 Cannabis sativa PK13064.1 I 0.876
PK13393.1 Cannabis sativa PK13393.1 I 0.786
PK17007.1 Cannabis sativa PK17007.1 I 0.897
Cagra.1744s0020 Capsella grandiflora Cagra.1744s0020 I 0.885
Cagra.1876s0007 Capsella grandiflora Cagra.1876s0007 I 0.990
Carubv10004220m.g Capsella rubella Carubv10004220m.g I 0.885
Carubv10022755m.g Capsella rubella Carubv10022755m.g I 0.990
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.719
evm.TU.supercontig_53.88 Carica papaya evm.TU.supercontig_53.88 I 0.876
evm.TU.supercontig_65.4 Carica papaya evm.TU.supercontig_65.4 I 0.938
Ca_02541 Cicer arietinum Ca_02541 I 0.938
Ca_08488 Cicer arietinum Ca_08488 I 0.835
Ca_17136 Cicer arietinum Ca_17136 I 0.876
Ca_17624 Cicer arietinum Ca_17624 I 0.722
Ca_26121 Cicer arietinum Ca_26121 I 0.897
Cla008883 Citrullus lanatus Cla008883 I 0.876
Cla013979 Citrullus lanatus Cla013979 I 0.866
Cla018574 Citrullus lanatus Cla018574 I 0.907
Cla022413 Citrullus lanatus Cla022413 I 0.711
Ciclev10011194m.g Citrus clementina Ciclev10011194m.g I 0.907
Ciclev10027901m.g Citrus clementina Ciclev10027901m.g I 0.866
Ciclev10030860m.g Citrus clementina Ciclev10030860m.g I 0.907
orange1.1g004896m.g Citrus sinensis orange1.1g004896m.g I 0.866
orange1.1g005075m.g Citrus sinensis orange1.1g005075m.g I 0.907
orange1.1g005482m.g Citrus sinensis orange1.1g005482m.g I 0.907
Cucsa.124410 Cucumis sativus Cucsa.124410 I 0.907
Cucsa.137650 Cucumis sativus Cucsa.137650 I 0.885
Cucsa.381330 Cucumis sativus Cucsa.381330 I 0.701
Cucsa.386060 Cucumis sativus Cucsa.386060 I 0.876
Eucgr.G02838 Eucalyptus grandis Eucgr.G02838 I 0.897
Eucgr.J00923 Eucalyptus grandis Eucgr.J00923 I 0.948
Eucgr.K01240 Eucalyptus grandis Eucgr.K01240 I 0.896
Thhalv10016329m.g Eutrema salsugineum Thhalv10016329m.g I 0.990
Thhalv10024601m.g Eutrema salsugineum Thhalv10024601m.g I 0.885
gene09733-v1.0-hybrid Fragaria vesca gene09733-v1.0-hybrid I 0.907
gene16844-v1.0-hybrid Fragaria vesca gene16844-v1.0-hybrid I 0.948
gene23280-v1.0-hybrid Fragaria vesca gene23280-v1.0-hybrid I 0.865
GLYMA10G06080 Glycine max GLYMA10G06080 I 0.887
GLYMA10G35481 Glycine max GLYMA10G35481 I 0.897
GLYMA11G20490 Glycine max GLYMA11G20490 I 0.897
GLYMA12G08110 Glycine max GLYMA12G08110 I 0.897
GLYMA12G29720 Glycine max GLYMA12G29720 I 0.928
GLYMA13G20382 Glycine max GLYMA13G20382 I 0.897
GLYMA13G40030 Glycine max GLYMA13G40030 I 0.918
GLYMA19G36571 Glycine max GLYMA19G36571 I 0.875
GLYMA20G32040 Glycine max GLYMA20G32040 I 0.896
Gorai.003G142500 Gossypium raimondii Gorai.003G142500 I 0.896
Gorai.006G166400 Gossypium raimondii Gorai.006G166400 I 0.897
Gorai.009G107800 Gossypium raimondii Gorai.009G107800 I 0.885
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.708
Gorai.011G238900 Gossypium raimondii Gorai.011G238900 I 0.854
Gorai.012G004800 Gossypium raimondii Gorai.012G004800 I 0.876
Gorai.013G267100 Gossypium raimondii Gorai.013G267100 I 0.844
MLOC_64795 Hordeum vulgare MLOC_64795 I 0.897
MLOC_77438 Hordeum vulgare MLOC_77438 I 0.885
LPERR02G20290 Leersia perrieri LPERR02G20290 I 0.885
LPERR04G15300 Leersia perrieri LPERR04G15300 I 0.835
LPERR06G21020 Leersia perrieri LPERR06G21020 I 0.865
LPERR10G09970 Leersia perrieri LPERR10G09970 I 0.896
Lus10016091.g Linum usitatissimum Lus10016091.g I 0.896
Lus10019940.g Linum usitatissimum Lus10019940.g I 0.887
Lus10021467.g Linum usitatissimum Lus10021467.g I 0.906
Lus10023519.g Linum usitatissimum Lus10023519.g I 0.835
Lus10026510.g Linum usitatissimum Lus10026510.g I 0.887
Lus10040403.g Linum usitatissimum Lus10040403.g I 0.835
chr1.LjT31L11.90.nd Lotus japonicus chr1.LjT31L11.90.nd I 0.701
chr3.LjT10E18.60.nc Lotus japonicus chr3.LjT10E18.60.nc I 0.918
LjSGA_045968.2 Lotus japonicus LjSGA_045968.2 I 0.826
MDP0000131481 Malus domestica MDP0000131481 I 0.928
MDP0000221322 Malus domestica MDP0000221322 I 0.928
MDP0000750392 Malus domestica MDP0000750392 I 0.887
cassava23558.valid.m1 Manihot esculenta cassava23558.valid.m1 I 0.907
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.732
cassava37879.valid.m1 Manihot esculenta cassava37879.valid.m1 I 0.928
cassava5984.valid.m1 Manihot esculenta cassava5984.valid.m1 I 0.907
cassava852.valid.m1 Manihot esculenta cassava852.valid.m1 I 0.907
MTR_0041s0110 Medicago truncatula MTR_0041s0110 I 0.750
MTR_1g064430 Medicago truncatula MTR_1g064430 I 0.896
MTR_1g094960 Medicago truncatula MTR_1g094960 I 0.897
MTR_2g094570 Medicago truncatula MTR_2g094570 I 0.927
MTR_4g058930 Medicago truncatula MTR_4g058930 I 0.896
MTR_7g101275 Medicago truncatula MTR_7g101275 I 0.740
MTR_7g101280 Medicago truncatula MTR_7g101280 I 0.750
mgf000336m Mimulus guttatus mgf000336m I 0.854
mgf005300m Mimulus guttatus mgf005300m I 0.887
mgf016139m Mimulus guttatus mgf016139m I 0.927
mgf024607m Mimulus guttatus mgf024607m I 0.876
GSMUA_Achr11G22870_001 Musa acuminata GSMUA_Achr11G22870_001 I 0.918
GSMUA_Achr4G18240_001 Musa acuminata GSMUA_Achr4G18240_001 I 0.927
GSMUA_Achr8G18930_001 Musa acuminata GSMUA_Achr8G18930_001 I 0.897
GSMUA_Achr9G29480_001 Musa acuminata GSMUA_Achr9G29480_001 I 0.719
OBART02G24860 Oryza barthii OBART02G24860 I 0.747
OBART04G18910 Oryza barthii OBART04G18910 I 0.802
OBART06G25230 Oryza barthii OBART06G25230 I 0.897
OBART10G13410 Oryza barthii OBART10G13410 I 0.876
OB02G32150 Oryza brachyantha OB02G32150 I 0.875
OB04G25990 Oryza brachyantha OB04G25990 I 0.760
OB06G32920 Oryza brachyantha OB06G32920 I 0.897
OB10G20590 Oryza brachyantha OB10G20590 I 0.896
ORGLA02G0215100 Oryza glaberrima ORGLA02G0215100 I 0.885
ORGLA04G0160200 Oryza glaberrima ORGLA04G0160200 I 0.802
ORGLA06G0209500 Oryza glaberrima ORGLA06G0209500 I 0.897
ORGLA10G0115500 Oryza glaberrima ORGLA10G0115500 I 0.876
OGLUM01G18360 Oryza glumaepatula OGLUM01G18360 I 0.802
OGLUM02G25270 Oryza glumaepatula OGLUM02G25270 I 0.885
OGLUM06G26560 Oryza glumaepatula OGLUM06G26560 I 0.897
OGLUM10G13220 Oryza glumaepatula OGLUM10G13220 I 0.876
BGIOSGA008657 Oryza indica BGIOSGA008657 I 0.885
ARF10 Oryza indica BGIOSGA016767 I 0.802
BGIOSGA033142 Oryza indica BGIOSGA033142 I 0.876
OLONG_000617 Oryza longistaminata OLONG_000617 I 0.875
OLONG_021130 Oryza longistaminata OLONG_021130 I 0.865
OMERI02G24320 Oryza meridionalis OMERI02G24320 I 0.885
OMERI04G15770 Oryza meridionalis OMERI04G15770 I 0.802
OMERI06G25370 Oryza meridionalis OMERI06G25370 I 0.897
OMERI10G10210 Oryza meridionalis OMERI10G10210 I 0.876
ONIVA02G27180 Oryza nivara ONIVA02G27180 I 0.885
ONIVA06G28270 Oryza nivara ONIVA06G28270 I 0.897
ONIVA06G31350 Oryza nivara ONIVA06G31350 I 0.802
ONIVA10G14700 Oryza nivara ONIVA10G14700 I 0.876
OPUNC02G22610 Oryza punctata OPUNC02G22610 I 0.885
OPUNC04G16630 Oryza punctata OPUNC04G16630 I 0.794
OPUNC06G22960 Oryza punctata OPUNC06G22960 I 0.897
OPUNC10G11840 Oryza punctata OPUNC10G11840 I 0.876
ORUFI02G26180 Oryza rufipogon ORUFI02G26180 I 0.885
ORUFI04G20430 Oryza rufipogon ORUFI04G20430 I 0.761
ORUFI06G27120 Oryza rufipogon ORUFI06G27120 I 0.897
ORUFI10G14150 Oryza rufipogon ORUFI10G14150 I 0.876
ARF8 Oryza sativa OS02G0628600 I 0.885
OS04G0519700 Oryza sativa OS04G0519700 I 0.802
ARF18 Oryza sativa OS06G0685700 I 0.897
ARF22 Oryza sativa OS10G0479900 I 0.876
Pavir.Da00107 Panicum virgatum Pavir.Da00107 I 0.887
Pavir.Gb00635 Panicum virgatum Pavir.Gb00635 I 0.823
Pavir.Ia01695 Panicum virgatum Pavir.Ia01695 I 0.874
Pavir.J24081 Panicum virgatum Pavir.J24081 I 0.823
Pavir.J26437 Panicum virgatum Pavir.J26437 I 0.897
Pavir.J37640 Panicum virgatum Pavir.J37640 I 0.711
PDK_20s1359671g001 Phoenix dactylifera PDK_20s1359671g001 I 0.908
e_gw1.279.55.1 Physcomitrella patens e_gw1.279.55.1 I 0.835
estExt_fgenesh1_pm.C_3390006 Physcomitrella patens estExt_fgenesh1_pm.C_3390006 I 0.865
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.711
POPTR_0004s22130 Populus trichocarpa POPTR_0004s22130 I 0.918
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.729
POPTR_0006s12930 Populus trichocarpa POPTR_0006s12930 I 0.856
POPTR_0008s03890 Populus trichocarpa POPTR_0008s03890 I 0.907
POPTR_0010s23000 Populus trichocarpa POPTR_0010s23000 I 0.907
POPTR_0016s09150 Populus trichocarpa POPTR_0016s09150 I 0.856
POPTR_0848s00200 Populus trichocarpa POPTR_0848s00200 I 0.918
Pm018533 Prunus mume Pm018533 I 0.907
Pm030120 Prunus mume Pm030120 I 0.907
Pm031275 Prunus mume Pm031275 I 0.928
PRUPE_ppa002082mg Prunus persica PRUPE_ppa002082mg I 0.927
PRUPE_ppa002195mg Prunus persica PRUPE_ppa002195mg I 0.907
PRUPE_ppa002710mg Prunus persica PRUPE_ppa002710mg I 0.907
PRUPE_ppa003136mg Prunus persica PRUPE_ppa003136mg I 0.701
27494.m000045 Ricinus communis 27494.m000045 I 0.885
27538.m000327 Ricinus communis 27538.m000327 I 0.938
29908.m005953 Ricinus communis 29908.m005953 I 0.732
30078.m002329 Ricinus communis 30078.m002329 I 0.897
SapurV1A.0010s0540 Salix purpurea SapurV1A.0010s0540 I 0.708
SapurV1A.0049s0400 Salix purpurea SapurV1A.0049s0400 I 0.876
SapurV1A.0141s0090 Salix purpurea SapurV1A.0141s0090 I 0.875
SapurV1A.0216s0160 Salix purpurea SapurV1A.0216s0160 I 0.928
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.729
SapurV1A.0518s0120 Salix purpurea SapurV1A.0518s0120 I 0.897
SapurV1A.0657s0050 Salix purpurea SapurV1A.0657s0050 I 0.897
SapurV1A.0986s0010 Salix purpurea SapurV1A.0986s0010 I 0.866
SELMODRAFT_437622 Selaginella moellendorffii SELMODRAFT_437622 I 0.825
SELMODRAFT_443304 Selaginella moellendorffii SELMODRAFT_443304 I 0.865
SELMODRAFT_444549 Selaginella moellendorffii SELMODRAFT_444549 I 0.865
SELMODRAFT_451564 Selaginella moellendorffii SELMODRAFT_451564 I 0.825
Si005991m.g Setaria italica Si005991m.g I 0.897
Si009541m.g Setaria italica Si009541m.g I 0.753
Si016509m.g Setaria italica Si016509m.g I 0.896
Si034525m.g Setaria italica Si034525m.g I 0.897
Solyc06g075150.2 Solanum lycopersicum Solyc06g075150.2 I 0.755
Solyc09g007810.2 Solanum lycopersicum Solyc09g007810.2 I 0.907
Solyc10g086130.1 Solanum lycopersicum Solyc10g086130.1 I 0.763
Solyc11g069500.1 Solanum lycopersicum Solyc11g069500.1 I 0.887
PGSC0003DMG400008081 Solanum tuberosum PGSC0003DMG400008081 I 0.906
PGSC0003DMG400021560 Solanum tuberosum PGSC0003DMG400021560 I 0.907
PGSC0003DMG400024320 Solanum tuberosum PGSC0003DMG400024320 I 0.765
Sb01g019130 Sorghum bicolor Sb01g019130 I 0.897
Sb04g026610 Sorghum bicolor Sb04g026610 I 0.906
Sb10g027790 Sorghum bicolor Sb10g027790 I 0.897
TCM_022163 Theobroma cacao TCM_022163 I 0.897
TCM_029792 Theobroma cacao TCM_029792 I 0.717
TCM_035002 Theobroma cacao TCM_035002 I 0.711
TCM_042067 Theobroma cacao TCM_042067 I 0.918
TCM_043157 Theobroma cacao TCM_043157 I 0.906
Traes_2BL_A1A475B0F Triticum aestivum Traes_2BL_A1A475B0F I 0.844
Traes_6DL_52A25BEA4 Triticum aestivum Traes_6DL_52A25BEA4 I 0.833
ARF10 Vitis vinifera VIT_06s0004g02750 I 0.928
VIT_08s0040g01810 Vitis vinifera VIT_08s0040g01810 I 0.906
ARF16 Vitis vinifera VIT_13s0019g04380 I 0.885
AC207656.3_FG002 Zea mays AC207656.3_FG002 I 0.897
GRMZM2G081406 Zea mays GRMZM2G081406 I 0.906
GRMZM2G153233 Zea mays GRMZM2G153233 I 0.887
GRMZM2G159399 Zea mays GRMZM2G159399 I 0.876
GRMZM2G390641 Zea mays GRMZM2G390641 I 0.844