CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_036843
(
Theobroma cacao
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
TCM_036843
T021541_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY29249
B3
4
91
FLKPLLPGFHKQLSIPLSFFIKYLKGQNCERAVLRSCGSRTWSVKLKGRRFEDGWEEFARDHDLYVGDVLVFRHGGNMVFDVMVFDTR
EOY29249
B3
134
231
YFVATLKPNNLKVSKLNIPRKFARSNGLTDRFCEMVLVDQQGRSWIANLRHKKSDGQVYIGRGWRNLCIANNLKEEDSVLLELIGNGKKPIFKLEVAR
EOY29250
B3
9
86
IMPHFLKPLLPGFHKQLNCERAVLRSCGSRTWSVKLKGRRFEDGWEEFARDHDLYVGDVLVFRHGGNMVFDVMVFDTR
EOY29250
B3
129
214
YFVATLKPNNLKVSKLNIPRKFARSNGLTDRFCEMVLVDQQGRSWIANLRHKKSDGQVYIGRGWRNLCIANNLKEEDSVLLELIGN
Links
Other
B3
family TFs
Other
Theobroma cacao
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL62
Arabidopsis thaliana
AT5G60440
I
Bostr.26833s0197
Boechera stricta
Bostr.26833s0197
N
Bo5g113750
Brassica oleracea
Bo5g113750
N
Bo9g142570
Brassica oleracea
Bo9g142570
N
Cagra.2519s0016
Capsella grandiflora
Cagra.2519s0016
N
Carubv10028580m.g
Capsella rubella
Carubv10028580m.g
N
evm.TU.supercontig_106.18
Carica papaya
evm.TU.supercontig_106.18
N
evm.TU.contig_41623
Carica papaya
evm.TU.contig_41623
N
evm.TU.contig_37271
Carica papaya
evm.TU.contig_37271
N
evm.TU.contig_35751
Carica papaya
evm.TU.contig_35751
N
evm.TU.contig_35713
Carica papaya
evm.TU.contig_35713
N
evm.TU.contig_33038
Carica papaya
evm.TU.contig_33038
N
evm.TU.contig_30908.1
Carica papaya
evm.TU.contig_30908.1
N
evm.TU.contig_30689
Carica papaya
evm.TU.contig_30689
N
evm.TU.contig_28241.1
Carica papaya
evm.TU.contig_28241.1
N
evm.TU.contig_26687.3
Carica papaya
evm.TU.contig_26687.3
N
evm.TU.contig_24748.4
Carica papaya
evm.TU.contig_24748.4
N
evm.TU.supercontig_106.19
Carica papaya
evm.TU.supercontig_106.19
N
evm.TU.supercontig_758.4
Carica papaya
evm.TU.supercontig_758.4
N
evm.TU.supercontig_654.6
Carica papaya
evm.TU.supercontig_654.6
N
evm.TU.supercontig_654.4
Carica papaya
evm.TU.supercontig_654.4
N
evm.TU.supercontig_625.4
Carica papaya
evm.TU.supercontig_625.4
N
evm.TU.supercontig_54.68
Carica papaya
evm.TU.supercontig_54.68
N
evm.TU.supercontig_505.4
Carica papaya
evm.TU.supercontig_505.4
N
evm.TU.supercontig_348.8
Carica papaya
evm.TU.supercontig_348.8
N
evm.TU.supercontig_348.4
Carica papaya
evm.TU.supercontig_348.4
N
evm.TU.supercontig_348.3
Carica papaya
evm.TU.supercontig_348.3
N
evm.TU.supercontig_347.7
Carica papaya
evm.TU.supercontig_347.7
N
evm.TU.supercontig_347.11
Carica papaya
evm.TU.supercontig_347.11
N
evm.TU.supercontig_1455.2
Carica papaya
evm.TU.supercontig_1455.2
N
evm.TU.supercontig_106.20
Carica papaya
evm.TU.supercontig_106.20
N
Ca_04659
Cicer arietinum
Ca_04659
N
Ca_04660
Cicer arietinum
Ca_04660
N
Ca_04661
Cicer arietinum
Ca_04661
N
Ca_04662
Cicer arietinum
Ca_04662
N
Ca_04665
Cicer arietinum
Ca_04665
N
Cla006571
Citrullus lanatus
Cla006571
N
Ciclev10030142m.g
Citrus clementina
Ciclev10030142m.g
N
orange1.1g039654m.g
Citrus sinensis
orange1.1g039654m.g
N
Cucsa.298560
Cucumis sativus
Cucsa.298560
N
Eucgr.I02506
Eucalyptus grandis
Eucgr.I02506
N
GLYMA10G10900
Glycine max
GLYMA10G10900
N
GLYMA20G27330
Glycine max
GLYMA20G27330
N
GLYMA20G27320
Glycine max
GLYMA20G27320
N
GLYMA10G40080
Glycine max
GLYMA10G40080
N
GLYMA10G11450
Glycine max
GLYMA10G11450
N
GLYMA10G10930
Glycine max
GLYMA10G10930
N
GLYMA10G10920
Glycine max
GLYMA10G10920
N
GLYMA02G30990
Glycine max
GLYMA02G30990
N
GLYMA10G10860
Glycine max
GLYMA10G10860
N
GLYMA10G10840
Glycine max
GLYMA10G10840
N
GLYMA10G10770
Glycine max
GLYMA10G10770
N
GLYMA10G10690
Glycine max
GLYMA10G10690
N
GLYMA10G10640
Glycine max
GLYMA10G10640
N
GLYMA10G10295
Glycine max
GLYMA10G10295
N
GLYMA02G35080
Glycine max
GLYMA02G35080
N
Lus10035456.g
Linum usitatissimum
Lus10035456.g
N
MDP0000233925
Malus domestica
MDP0000233925
N
MDP0000434703
Malus domestica
MDP0000434703
I
MDP0000278770
Malus domestica
MDP0000278770
N
cassava21387.m1
Manihot esculenta
cassava21387.m1
N
cassava33542.m1
Manihot esculenta
cassava33542.m1
N
MTR_1g105910
Medicago truncatula
MTR_1g105910
N
MTR_8g043650
Medicago truncatula
MTR_8g043650
N
MTR_5g055100
Medicago truncatula
MTR_5g055100
N
MTR_5g053390
Medicago truncatula
MTR_5g053390
N
MTR_5g045560
Medicago truncatula
MTR_5g045560
N
MTR_3g052920
Medicago truncatula
MTR_3g052920
N
MTR_3g052870
Medicago truncatula
MTR_3g052870
N
MTR_3g030770
Medicago truncatula
MTR_3g030770
N
MTR_2g085280
Medicago truncatula
MTR_2g085280
N
MTR_2g085250
Medicago truncatula
MTR_2g085250
N
MTR_2g030740
Medicago truncatula
MTR_2g030740
N
MTR_1g108580
Medicago truncatula
MTR_1g108580
N
MTR_1g108510
Medicago truncatula
MTR_1g108510
N
MTR_1g012570
Medicago truncatula
MTR_1g012570
N
MTR_1g075600
Medicago truncatula
MTR_1g075600
N
MTR_1g077360
Medicago truncatula
MTR_1g077360
N
MTR_1g105920
Medicago truncatula
MTR_1g105920
N
POPTR_0009s08750
Populus trichocarpa
POPTR_0009s08750
N
Pm021071
Prunus mume
Pm021071
N
PRUPE_ppa026127mg
Prunus persica
PRUPE_ppa026127mg
N
30099.m001672
Ricinus communis
30099.m001672
N
SapurV1A.0019s0690
Salix purpurea
SapurV1A.0019s0690
N