PK10136.1 (Cannabis sativa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 PK10136.1 T024331_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF16
M06708_2.00 		Arabidopsis thaliana
TTTACGKTTTTGGCGGRAAAA
TTTTYCCGCCAAAAMCGTAAA		 Dap-seq
OMalley et al.(2016)
ARF16_col_b 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK10136.1 B3 143 245

Links

Other B3 family TFs
Other Cannabis sativa TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01779 Aegilops tauschii F775_01779 I
F775_02345 Aegilops tauschii F775_02345 I
F775_05774 Aegilops tauschii F775_05774 I
F775_32062 Aegilops tauschii F775_32062 I
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I
PK07402.1 Cannabis sativa PK07402.1 D
PK07829.1 Cannabis sativa PK07829.1 I
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I
Cla001755 Citrullus lanatus Cla001755 I
Cla006713 Citrullus lanatus Cla006713 I
Cla022803 Citrullus lanatus Cla022803 I
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I
Cucsa.119440 Cucumis sativus Cucsa.119440 I
Cucsa.136780 Cucumis sativus Cucsa.136780 I
Cucsa.231820 Cucumis sativus Cucsa.231820 I
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I
GLYMA06G45680 Glycine max GLYMA06G45680 I
MLOC_12223 Hordeum vulgare MLOC_12223 I
MLOC_66580 Hordeum vulgare MLOC_66580 I
MLOC_66686 Hordeum vulgare MLOC_66686 I
LPERR01G03760 Leersia perrieri LPERR01G03760 I
LPERR08G12790 Leersia perrieri LPERR08G12790 I
LPERR08G20650 Leersia perrieri LPERR08G20650 I
Lus10006127.g Linum usitatissimum Lus10006127.g I
Lus10010632.g Linum usitatissimum Lus10010632.g I
Lus10012226.g Linum usitatissimum Lus10012226.g I
Lus10023633.g Linum usitatissimum Lus10023633.g I
Lus10024298.g Linum usitatissimum Lus10024298.g I
Lus10034902.g Linum usitatissimum Lus10034902.g I
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I
MDP0000147009 Malus domestica MDP0000147009 I
MDP0000153866 Malus domestica MDP0000153866 I
MDP0000165880 Malus domestica MDP0000165880 I
MDP0000446783 Malus domestica MDP0000446783 I
MDP0000880312 Malus domestica MDP0000880312 I
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I
MTR_5g083330 Medicago truncatula MTR_5g083330 I
MTR_5g083340 Medicago truncatula MTR_5g083340 I
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I
OBART01G04210 Oryza barthii OBART01G04210 I
OB01G13930 Oryza brachyantha OB01G13930 I
OB08G30790 Oryza brachyantha OB08G30790 I
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I
BGIOSGA002846 Oryza indica BGIOSGA002846 I
BGIOSGA026461 Oryza indica BGIOSGA026461 I
BGIOSGA026464 Oryza indica BGIOSGA026464 I
OLONG_014228 Oryza longistaminata OLONG_014228 I
OMERI01G04110 Oryza meridionalis OMERI01G04110 I
OMERI08G18820 Oryza meridionalis OMERI08G18820 I
ONIVA01G04630 Oryza nivara ONIVA01G04630 I
ONIVA09G01190 Oryza nivara ONIVA09G01190 I
OPUNC01G03970 Oryza punctata OPUNC01G03970 I
OPUNC08G21890 Oryza punctata OPUNC08G21890 I
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I
DREB2A Oryza sativa OS01G0165000 I
DREB2C Oryza sativa OS08G0565200 I
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I
Pavir.J22169 Panicum virgatum Pavir.J22169 I
Pavir.J25464 Panicum virgatum Pavir.J25464 I
Pavir.J37967 Panicum virgatum Pavir.J37967 I
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I
Pm018989 Prunus mume Pm018989 I
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I
29729.m002292 Ricinus communis 29729.m002292 I
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I
Si022619m.g Setaria italica Si022619m.g I
Si024059m.g Setaria italica Si024059m.g I
Sb03g004980 Sorghum bicolor Sb03g004980 I
Sb09g016150 Sorghum bicolor Sb09g016150 I
TCM_026121 Theobroma cacao TCM_026121 I
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I
TRIUR3_17409 Triticum urartu TRIUR3_17409 I
TRIUR3_17973 Triticum urartu TRIUR3_17973 I
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I
GRMZM2G006745 Zea mays GRMZM2G006745 I
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D