SVE_0901200 (Strongyloides venezuelensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SVE_0901200 T157418_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sens
M03666_2.00 		Drosophila melanogaster
TGCWSTGATTTATY
RATAAATCASWGCA		 SELEX
Nitta et al.(2015)
sens_1 		0.790 0.848
sens
M06056_2.00 		Drosophila melanogaster
AAATCACDGC
GCHGTGATTT		 B1H
Zhu et al.(2011)
sens_SANGER_10_FBgn0002573 		0.790 0.848
sens
M06057_2.00 		Drosophila melanogaster
NNNNAAATCACRGCH
DGCYGTGATTTNNNN		 B1H
Zhu et al.(2011)
sens_SOLEXA_5_FBgn0002573 		0.790 0.848
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVE_0901200.1 C2H2 ZF 221 243
SVE_0901200.1 C2H2 ZF 249 271
SVE_0901200.1 C2H2 ZF 277 299
SVE_0901200.1 C2H2 ZF 305 328

Links

Other C2H2 ZF family TFs
Other Strongyloides venezuelensis TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00137p00104280 Amborella trichopoda AMTR_s00137p00104280 I
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I
ZAT1 Arabidopsis thaliana AT1G02030 D
ZAT4 Arabidopsis thaliana AT2G45120 D
AZF2 Arabidopsis thaliana AT3G19580 D
ZAT9 Arabidopsis thaliana AT3G60580 D
AT5G03510 Arabidopsis thaliana AT5G03510 D
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I
BRADI4G03410 Brachypodium distachyon BRADI4G03410 I
Bo1g113530 Brassica oleracea Bo1g113530 I
Bo3g037560 Brassica oleracea Bo3g037560 I
Bo4g104940 Brassica oleracea Bo4g104940 I
Bo4g195370 Brassica oleracea Bo4g195370 I
Bo5g113850 Brassica oleracea Bo5g113850 I
Bo6g077190 Brassica oleracea Bo6g077190 I
Bo8g095300 Brassica oleracea Bo8g095300 I
Bra000372 Brassica rapa Bra000372 I
Bra003422 Brassica rapa Bra003422 I
Bra007545 Brassica rapa Bra007545 I
Bra014483 Brassica rapa Bra014483 I
Bra022436 Brassica rapa Bra022436 I
Bra029315 Brassica rapa Bra029315 N
Bra038219 Brassica rapa Bra038219 I
Bra040325 Brassica rapa Bra040325 I
PK10188.1 Cannabis sativa PK10188.1 I
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I
Carubv10014391m.g Capsella rubella Carubv10014391m.g I
Carubv10017660m.g Capsella rubella Carubv10017660m.g I
Carubv10023569m.g Capsella rubella Carubv10023569m.g I
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I
Ca_01586 Cicer arietinum Ca_01586 I
Ca_05641 Cicer arietinum Ca_05641 I
Ca_18364 Cicer arietinum Ca_18364 I
Ca_23672 Cicer arietinum Ca_23672 I
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I
Ciclev10032889m.g Citrus clementina Ciclev10032889m.g I
Ciclev10032899m.g Citrus clementina Ciclev10032899m.g I
Ciclev10032922m.g Citrus clementina Ciclev10032922m.g I
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I
orange1.1g040287m.g Citrus sinensis orange1.1g040287m.g I
orange1.1g041414m.g Citrus sinensis orange1.1g041414m.g I
orange1.1g044181m.g Citrus sinensis orange1.1g044181m.g I
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I
Eucgr.A01230 Eucalyptus grandis Eucgr.A01230 I
Eucgr.A01231 Eucalyptus grandis Eucgr.A01231 I
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I
Eucgr.K00165 Eucalyptus grandis Eucgr.K00165 I
Thhalv10001538m.g Eutrema salsugineum Thhalv10001538m.g I
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I
Thhalv10009894m.g Eutrema salsugineum Thhalv10009894m.g I
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I
gene18205-v1.0-hybrid Fragaria vesca gene18205-v1.0-hybrid I
GLYMA01G18606 Glycine max GLYMA01G18606 I
GLYMA01G32981 Glycine max GLYMA01G32981 I
GLYMA03G03950 Glycine max GLYMA03G03950 I
GLYMA04G04760 Glycine max GLYMA04G04760 I
GLYMA06G04840 Glycine max GLYMA06G04840 I
GLYMA10G40400 Glycine max GLYMA10G40400 I
GLYMA14G09760 Glycine max GLYMA14G09760 I
GLYMA17G35430 Glycine max GLYMA17G35430 I
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I
Gorai.006G104800 Gossypium raimondii Gorai.006G104800 I
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I
Gorai.012G006900 Gossypium raimondii Gorai.012G006900 I
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I
MLOC_51405 Hordeum vulgare MLOC_51405 I
MLOC_54674 Hordeum vulgare MLOC_54674 I
LPERR03G21480 Leersia perrieri LPERR03G21480 I
Lus10009278.g Linum usitatissimum Lus10009278.g I
Lus10015888.g Linum usitatissimum Lus10015888.g I
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I
MDP0000198015 Malus domestica MDP0000198015 I
MDP0000319225 Malus domestica MDP0000319225 I
MDP0000573176 Malus domestica MDP0000573176 I
MDP0000762756 Malus domestica MDP0000762756 I
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I
cassava14164.m1 Manihot esculenta cassava14164.m1 I
cassava15802.m1 Manihot esculenta cassava15802.m1 I
cassava19892.m1 Manihot esculenta cassava19892.m1 I
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I
cassava39064.m1 Manihot esculenta cassava39064.m1 I
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I
MTR_1g018420 Medicago truncatula MTR_1g018420 I
MTR_1g106730 Medicago truncatula MTR_1g106730 I
MTR_3g102980 Medicago truncatula MTR_3g102980 I
MTR_4g027440 Medicago truncatula MTR_4g027440 I
mgf006006m Mimulus guttatus mgf006006m I
mgf017082m Mimulus guttatus mgf017082m I
mgf021094m Mimulus guttatus mgf021094m I
mgf021789m Mimulus guttatus mgf021789m I
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I
GSMUA_Achr11G24480_001 Musa acuminata GSMUA_Achr11G24480_001 I
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I
GSMUA_Achr4G12160_001 Musa acuminata GSMUA_Achr4G12160_001 I
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I
GSMUA_Achr5G15450_001 Musa acuminata GSMUA_Achr5G15450_001 I
GSMUA_Achr5G28550_001 Musa acuminata GSMUA_Achr5G28550_001 I
GSMUA_AchrUn_randomG03030_001 Musa acuminata GSMUA_AchrUn_randomG03030_001 I
GSMUA_AchrUn_randomG07580_001 Musa acuminata GSMUA_AchrUn_randomG07580_001 I
OBART02G26700 Oryza barthii OBART02G26700 I
OBART04G21020 Oryza barthii OBART04G21020 I
OB04G28040 Oryza brachyantha OB04G28040 I
ORGLA02G0229600 Oryza glaberrima ORGLA02G0229600 I
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I
OGLUM02G27190 Oryza glumaepatula OGLUM02G27190 I
BGIOSGA008755 Oryza indica BGIOSGA008755 I
BGIOSGA016894 Oryza indica BGIOSGA016894 I
OLONG_016061 Oryza longistaminata OLONG_016061 I
OMERI02G26030 Oryza meridionalis OMERI02G26030 I
OMERI04G17450 Oryza meridionalis OMERI04G17450 I
ONIVA02G29150 Oryza nivara ONIVA02G29150 I
ONIVA04G19260 Oryza nivara ONIVA04G19260 I
OPUNC04G18700 Oryza punctata OPUNC04G18700 I
OPUNC12G15600 Oryza punctata OPUNC12G15600 I
ORUFI02G28150 Oryza rufipogon ORUFI02G28150 I
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I
OS02G0659500 Oryza sativa OS02G0659500 I
OS04G0552700 Oryza sativa OS04G0552700 I
OS12G0583700 Oryza sativa OS12G0583700 I
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I
POPTR_0006s12340 Populus trichocarpa POPTR_0006s12340 I
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I
Pm005390 Prunus mume Pm005390 I
Pm021284 Prunus mume Pm021284 I
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I
PRUPE_ppa012242mg Prunus persica PRUPE_ppa012242mg I
28152.m000908 Ricinus communis 28152.m000908 I
29661.m000908 Ricinus communis 29661.m000908 I
30170.m013751 Ricinus communis 30170.m013751 I
30174.m008818 Ricinus communis 30174.m008818 I
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I
Si010615m.g Setaria italica Si010615m.g I
Si023013m.g Setaria italica Si023013m.g I
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I
TCM_007214 Theobroma cacao TCM_007214 I
TCM_034720 Theobroma cacao TCM_034720 I
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I
TRIUR3_29692 Triticum urartu TRIUR3_29692 I
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I
GRMZM2G170520 Zea mays GRMZM2G170520 I