CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L3mbtl4
(
Dipodomys ordii
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01530 (zf-C2HC)
IPR002515
ENSDORG00000013048
T158974_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000012264
C2HC ZF
377
406
VCPTPGCRGIGHIRGPRYAGHHSAFGCPYS
Links
Other
C2HC ZF
family TFs
Other
Dipodomys ordii
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_10696
Aegilops tauschii
F775_10696
N
0.000
Aquca_013_00142
Aquilegia coerulea
Aquca_013_00142
I
0.000
HMGB13
Arabidopsis thaliana
AT4G11080
D
0.000
Bostr.25463s0218
Boechera stricta
Bostr.25463s0218
I
0.000
BRADI3G09690
Brachypodium distachyon
BRADI3G09690
I
0.000
Cagra.3839s0003
Capsella grandiflora
Cagra.3839s0003
I
0.000
Carubv10000930m.g
Capsella rubella
Carubv10000930m.g
I
0.000
MLOC_57360
Hordeum vulgare
MLOC_57360
N
0.000
LPERR02G09420
Leersia perrieri
LPERR02G09420
N
0.000
Lus10001909.g
Linum usitatissimum
Lus10001909.g
I
0.000
mgf015439m
Mimulus guttatus
mgf015439m
I
0.000
GSMUA_Achr6G14260_001
Musa acuminata
GSMUA_Achr6G14260_001
I
0.000
OBART02G11160
Oryza barthii
OBART02G11160
I
0.000
OB02G19930
Oryza brachyantha
OB02G19930
N
0.000
OGLUM02G11100
Oryza glumaepatula
OGLUM02G11100
I
0.000
BGIOSGA006746
Oryza indica
BGIOSGA006746
I
0.000
OLONG_021730
Oryza longistaminata
OLONG_021730
N
0.000
OMERI02G11890
Oryza meridionalis
OMERI02G11890
N
0.000
ONIVA02G12490
Oryza nivara
ONIVA02G12490
I
0.000
ORUFI02G11130
Oryza rufipogon
ORUFI02G11130
I
0.000
OS02G0258200
Oryza sativa
OS02G0258200
N
0.000
Pavir.Ab01026
Panicum virgatum
Pavir.Ab01026
I
0.000
Pavir.J07596
Panicum virgatum
Pavir.J07596
I
0.000
POPTR_0001s10410
Populus trichocarpa
POPTR_0001s10410
I
0.000
Pm024077
Prunus mume
Pm024077
I
0.000
PRUPE_ppa004611mg
Prunus persica
PRUPE_ppa004611mg
I
0.000
SapurV1A.0035s0680
Salix purpurea
SapurV1A.0035s0680
I
0.000
Si017040m.g
Setaria italica
Si017040m.g
I
0.000
Sb04g009610
Sorghum bicolor
Sb04g009610
I
0.000
TCM_016416
Theobroma cacao
TCM_016416
I
0.000
Traes_2AL_72F4E1905
Triticum aestivum
Traes_2AL_72F4E1905
I
0.000
VIT_02s0025g01220
Vitis vinifera
VIT_02s0025g01220
I
0.000
GRMZM2G060253
Zea mays
GRMZM2G060253
I
0.000