Pavir.Ib01512 (Panicum virgatum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Pavir.Ib01512 T175398_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.801 0.801
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.801 0.801
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.781 0.781
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.773 0.773
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.773 0.773
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib01512.1.p EIN3 78 335

Links

Other EIN3 family TFs
Other Panicum virgatum TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_28545 Aegilops tauschii F775_28545 I 0.936
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.722
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.827
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.705
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.829
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.785
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.798
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.703
EIL1 Arabidopsis thaliana AT2G27050 D 0.794
EIN3 Arabidopsis thaliana AT3G20770 D 0.789
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.789
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.781
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.711
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.936
Bo1g108650 Brassica oleracea Bo1g108650 I 0.781
Bo3g041690 Brassica oleracea Bo3g041690 I 0.798
Bo3g076180 Brassica oleracea Bo3g076180 I 0.757
Bo5g106280 Brassica oleracea Bo5g106280 I 0.782
Bo6g087550 Brassica oleracea Bo6g087550 I 0.705
Bo6g118030 Brassica oleracea Bo6g118030 I 0.703
Bra000528 Brassica rapa Bra000528 I 0.802
Bra001802 Brassica rapa Bra001802 I 0.771
Bra008110 Brassica rapa Bra008110 I 0.704
PK01239.1 Cannabis sativa PK01239.1 I 0.813
PK13351.1 Cannabis sativa PK13351.1 I 0.809
PK19114.1 Cannabis sativa PK19114.1 I 0.725
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.707
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.789
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.790
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.789
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.707
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.790
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.801
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.764
Ca_02669 Cicer arietinum Ca_02669 I 0.729
Ca_07534 Cicer arietinum Ca_07534 I 0.805
Ca_10236 Cicer arietinum Ca_10236 I 0.785
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.825
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.825
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.809
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.725
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.809
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.825
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.725
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.825
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.809
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.713
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.850
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.725
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.817
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.809
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.793
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.711
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.793
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.821
gene00392-v1.0-hybrid Fragaria vesca gene00392-v1.0-hybrid I 0.757
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.733
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.823
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.809
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.797
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.809
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.737
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.821
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.737
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.813
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.805
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.805
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.704
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.809
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.805
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.936
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.940
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.761
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.721
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.713
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.789
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.733
LjSGA_067101.1 Lotus japonicus LjSGA_067101.1 I 0.814
MDP0000202831 Malus domestica MDP0000202831 I 0.809
MDP0000212881 Malus domestica MDP0000212881 I 0.805
MDP0000306498 Malus domestica MDP0000306498 I 0.821
MDP0000490180 Malus domestica MDP0000490180 I 0.725
MDP0000562585 Malus domestica MDP0000562585 I 0.713
MDP0000564884 Malus domestica MDP0000564884 I 0.805
MDP0000565880 Malus domestica MDP0000565880 I 0.713
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.733
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.703
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.813
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.725
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.821
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.785
mgf012394m Mimulus guttatus mgf012394m I 0.769
mgf015996m Mimulus guttatus mgf015996m I 0.785
mgf018950m Mimulus guttatus mgf018950m I 0.777
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.845
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.781
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.843
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.775
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.711
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.829
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.883
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.835
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.817
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.706
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.814
OBART07G26760 Oryza barthii OBART07G26760 I 0.800
OB07G32250 Oryza brachyantha OB07G32250 I 0.738
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.940
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.833
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.940
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.940
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.833
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.871
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.940
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.788
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.821
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.940
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.833
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.940
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.833
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.940
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.833
OS02G0689132 Oryza sativa OS02G0689132 I 0.720
OS03G0324200 Oryza sativa OS03G0324200 I 0.940
OS03G0324300 Oryza sativa OS03G0324300 I 0.940
OS07G0685700 Oryza sativa OS07G0685700 I 0.833
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.761
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.992
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.741
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.786
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.812
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.817
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.741
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.705
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.813
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.817
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.793
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.813
Pm017009 Prunus mume Pm017009 I 0.817
Pm028171 Prunus mume Pm028171 I 0.723
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.719
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.781
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.801
29708.m000185 Ricinus communis 29708.m000185 I 0.793
30169.m006395 Ricinus communis 30169.m006395 I 0.729
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.717
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.813
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.785
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.793
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.817
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.729
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.784
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.784
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.704
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.704
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.778
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.759
Si029213m.g Setaria italica Si029213m.g I 0.761
Si034616m.g Setaria italica Si034616m.g I 0.984
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.801
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.729
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.817
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.805
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.801
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.797
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.801
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.801
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.805
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.729
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.980
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.770
TCM_040510 Theobroma cacao TCM_040510 I 0.709
TCM_042022 Theobroma cacao TCM_042022 I 0.809
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.769
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.936
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.951
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.940
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.718
TRIUR3_26675 Triticum urartu TRIUR3_26675 N 0.775
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.816
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.725
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.797
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.825
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.786
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.980
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.786
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.980