POPTR_0014s16230 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0014s16230 T201233_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s16230.1 GRAS 177 547

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.726
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.829
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.783
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.737
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.827
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.737
SCL5 Arabidopsis thaliana AT1G50600 N 0.737
SCL21 Arabidopsis thaliana AT2G04890 N 0.737
PAT1 Arabidopsis thaliana AT5G48150 N 0.840
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.832
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.729
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.750
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.702
Bo9g009260 Brassica oleracea Bo9g009260 N 0.821
Bo7g089080 Brassica oleracea Bo7g089080 N 0.802
Bo7g030310 Brassica oleracea Bo7g030310 N 0.721
Bo6g022330 Brassica oleracea Bo6g022330 N 0.732
Bo2g149670 Brassica oleracea Bo2g149670 N 0.818
Bra037509 Brassica rapa Bra037509 N 0.775
Bra036185 Brassica rapa Bra036185 N 0.821
Bra020715 Brassica rapa Bra020715 N 0.816
Bra018860 Brassica rapa Bra018860 N 0.732
PK09018.1 Cannabis sativa PK09018.1 N 0.851
PK15082.1 Cannabis sativa PK15082.1 N 0.740
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.724
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.835
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.724
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.732
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.724
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.835
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.751
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.894
Ca_13855 Cicer arietinum Ca_13855 N 0.705
Ca_09786 Cicer arietinum Ca_09786 N 0.875
Cla004565 Citrullus lanatus Cla004565 N 0.734
Cla001429 Citrullus lanatus Cla001429 N 0.854
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.862
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.770
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.865
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.718
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.843
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.851
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.748
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.721
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.729
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.805
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.908
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.780
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.894
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.892
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.770
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.902
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.897
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.770
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.805
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.840
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.764
MDP0000804652 Malus domestica MDP0000804652 N 0.878
MDP0000284679 Malus domestica MDP0000284679 N 0.775
MDP0000205236 Malus domestica MDP0000205236 N 0.775
MDP0000152670 Malus domestica MDP0000152670 N 0.892
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.824
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.794
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.810
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.805
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.707
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.886
mgf013039m Mimulus guttatus mgf013039m N 0.710
OBART10G07700 Oryza barthii OBART10G07700 N 0.710
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.710
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.710
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.707
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.707
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.702
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.713
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.705
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.702
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.705
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.710
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.748
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.778
Pm015021 Prunus mume Pm015021 N 0.900
Pm012019 Prunus mume Pm012019 N 0.794
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.905
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.775
27613.m000642 Ricinus communis 27613.m000642 N 0.810
29949.m000124 Ricinus communis 29949.m000124 N 0.802
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.786
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.981
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.854
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.770
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.854
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.767
TCM_002319 Theobroma cacao TCM_002319 N 0.900
TCM_030733 Theobroma cacao TCM_030733 N 0.799
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.707
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.732
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.902
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.810