ENSTRUG00000015974 (Takifugu rubripes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTRUG00000015974 T216789_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hoxa9
M00475_2.00 		Mus musculus
NNDDBNNN
NNNVHHNN		 PBM
Berger et al.(2008)
Hoxa9_2622 		0.817 0.965
HOXA9
M03085_2.00 		Homo sapiens
NNDTTWAYGAYN
NRTCRTWAAHNN		 SELEX
Jolma et al.(2013)
HOXA10_1 		0.817 0.965
HOXA9
M03086_2.00 		Homo sapiens
NDTTWATKRYN
NRYMATWAAHN		 SELEX
Jolma et al.(2013)
HOXA10_2 		0.817 0.965
HOXA9
M04932_2.00 		Homo sapiens
NNDWWABKRC
GYMVTWWHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1 		0.817 0.965
HOXA9
M04933_2.00 		Homo sapiens
NNDTWAYGRB
VYCRTWAHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2 		0.817 0.965
Hoxa9
M08138_2.00 		Mus musculus
TGATTKATKRB
VYMATMAATCA		 ChIP-seq
Mathelier et al.(2014)
MA0594.1 		0.817 0.965
HOXA9
M09130_2.00 		Homo sapiens
DCATAAAYYRBH
DVYRRTTTATGH		 Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C 		0.817 0.965
HOXA9
M09131_2.00 		Homo sapiens
HHATAAATCAH
DTGATTTATDD		 Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B 		0.817 0.965
Hoxa9
M09203_2.00 		Mus musculus
HHATAAATCAH
DTGATTTATDD		 Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B 		0.817 0.965
Hoxa9
M09575_2.00 		Mus musculus
WGATTKATDRBY
RVYHATMAATCW		 Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509 		0.817 0.965
HOXA9
M10642_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA10_Q6 		0.817 0.965
HOXA9
M10643_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA9_04 		0.817 0.965
HOXA9
M10644_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA9_Q5_01 		0.817 0.965
HOXA9
M10645_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA9_Q5 		0.817 0.965
HOXA9
M04934_2.00 		Homo sapiens
NNDTWAYKRC
GYMRTWAHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1 		0.817 0.965
HOXA9
M04935_2.00 		Homo sapiens
NNDTWACGAY
RTCGTWAHNN		 SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2 		0.817 0.965
Hoxb9
M00410_2.00 		Mus musculus
NTTWAYDDNN
NNHHRTWAAN		 PBM
Berger et al.(2008)
Hoxb9_3413 		0.817 0.912
HOXB9
M05289_2.00 		Homo sapiens
RTCRTAAAWN
NWTTTAYGAY		 SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1 		0.817 0.912
HOXB9
M05290_2.00 		Homo sapiens
NTTTWATKRC
GYMATWAAAN		 SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2 		0.817 0.912
HOXB9
M05291_2.00 		Homo sapiens
GTCGTAAAHB
VDTTTACGAC		 SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX 		0.817 0.912
Hoxd9
M03282_2.00 		Mus musculus
TTTWATKKB
VMMATWAAA		 SELEX
Jolma et al.(2013)
Hoxd9_1 		0.805 0.930
Hoxd9
M03283_2.00 		Mus musculus
DWTTWATKRY
RYMATWAAWH		 SELEX
Jolma et al.(2013)
Hoxd9_2 		0.805 0.930
Hoxd9
M03284_2.00 		Mus musculus
DTTWAYGRB
VYCRTWAAH		 SELEX
Jolma et al.(2013)
Hoxd9_3 		0.805 0.930
HOXC9
M05331_2.00 		Homo sapiens
GTCGTAAAAN
NTTTTACGAC		 SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1 		0.805 0.930
HOXC9
M05332_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2 		0.805 0.930
HOXD9
M05104_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1 		0.805 0.930
HOXD9
M05105_2.00 		Homo sapiens
RTCRTAAAWN
NWTTTAYGAY		 SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2 		0.805 0.930
HOXD9
M05108_2.00 		Homo sapiens
RTCGTAAAWN
NWTTTACGAY		 SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1 		0.805 0.930
HOXD9
M05109_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2 		0.805 0.930
HOXC9
M09161_2.00 		Homo sapiens
HTTWATKGCH
DGCMATWAAD		 Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C 		0.805 0.930
HOXD9
M10686_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD9_Q2 		0.805 0.930
HOXC9
M05333_2.00 		Homo sapiens
RTCGTAAAHN
NDTTTACGAY		 SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1 		0.805 0.930
HOXC9
M05334_2.00 		Homo sapiens
NTTTWATKRC
GYMATWAAAN		 SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2 		0.805 0.930
HOXD9
M05106_2.00 		Homo sapiens
NNTTWATKRC
GYMATWAANN		 SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1 		0.805 0.930
HOXD9
M05107_2.00 		Homo sapiens
RTCGTAAANN
NNTTTACGAY		 SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2 		0.805 0.930
HOXD9
M05110_2.00 		Homo sapiens
RTCGTAAANN
NNTTTACGAY		 SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1 		0.805 0.930
HOXD9
M05111_2.00 		Homo sapiens
NDTTWATKRC
GYMATWAAHN		 SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2 		0.805 0.930
Hoxc9
M00470_2.00 		Mus musculus
NGTAATWAAN
NTTWATTACN		 PBM
Berger et al.(2008)
Hoxc9_2367 		0.797 0.912
Hoxc9
M08137_2.00 		Mus musculus
NWGATTTATDGSH
DSCHATAAATCWN		 ChIP-seq
Mathelier et al.(2014)
MA0485.1 		0.797 0.912
Hoxc9
M09574_2.00 		Mus musculus
TGATTTATDGCH
DGCHATAAATCA		 Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812 		0.797 0.912
Hoxd11
M00493_2.00 		Mus musculus
DDDNNNNN
NNNNNHHH		 PBM
Berger et al.(2008)
Hoxd11_3873 		0.795 0.702
HOXD11
M03139_2.00 		Homo sapiens
RTCGTAAAWH
DWTTTACGAY		 SELEX
Jolma et al.(2013)
HOXD11_1 		0.795 0.702
HOXD11
M03140_2.00 		Homo sapiens
TTTWATKRBH
DVYMATWAAA		 SELEX
Jolma et al.(2013)
HOXD11_2 		0.795 0.702
HOXD11
M05120_2.00 		Homo sapiens
NRTCGTWAANNDTWAH
DTWAHNNTTWACGAYN		 SELEX
Yin et al.(2017)
HOXD11_eDBD_HT-SELEX 		0.795 0.702
HOXD11
M05121_2.00 		Homo sapiens
NRTCGTWAAHNDTWAH
DTWAHNDTTWACGAYN		 SELEX
Yin et al.(2017)
HOXD11_eDBD_Methyl-HT-SELEX 		0.795 0.702
Hoxc11
M00390_2.00 		Mus musculus
NTTWAYDDBN
NVHHRTWAAN		 PBM
Berger et al.(2008)
Hoxc11_3718 		0.795 0.684
Hoxa11
M00474_2.00 		Mus musculus
NNHNHNNNN
NNNNDNDNN		 PBM
Berger et al.(2008)
Hoxa11_2218 		0.795 0.684
HOXC11
M03131_2.00 		Homo sapiens
NWTTWAYGAYH
DRTCRTWAAWN		 SELEX
Jolma et al.(2013)
HOXC11_1 		0.795 0.684
HOXC11
M03132_2.00 		Homo sapiens
NWTTWATKRBH
DVYMATWAAWN		 SELEX
Jolma et al.(2013)
HOXC11_2 		0.795 0.684
HOXC11
M03133_2.00 		Homo sapiens
DRTCGTWAAWN
NWTTWACGAYH		 SELEX
Jolma et al.(2013)
HOXC11_3 		0.795 0.684
HOXC11
M03134_2.00 		Homo sapiens
NTTTTATKRBN
NVYMATAAAAN		 SELEX
Jolma et al.(2013)
HOXC11_4 		0.795 0.684
Hoxa11
M03274_2.00 		Mus musculus
NNDTTWAYGABN
NVTCRTWAAHNN		 SELEX
Jolma et al.(2013)
Hoxa11_1 		0.795 0.684
Hoxa11
M03275_2.00 		Mus musculus
NDTTWATKRNN
NNYMATWAAHN		 SELEX
Jolma et al.(2013)
Hoxa11_2 		0.795 0.684
HOXA11
M04897_2.00 		Homo sapiens
VGTCGTAAAWH
DWTTTACGACB		 SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_1 		0.795 0.684
HOXA11
M04898_2.00 		Homo sapiens
DDTTWATKRSN
NSYMATWAAHH		 SELEX
Yin et al.(2017)
HOXA11_eDBD_HT-SELEX_2 		0.795 0.684
HOXC11
M05075_2.00 		Homo sapiens
NDTTWACGAYN
NRTCGTWAAHN		 SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_1 		0.795 0.684
HOXC11
M05076_2.00 		Homo sapiens
NWTTWATKRCH
DGYMATWAAWN		 SELEX
Yin et al.(2017)
HOXC11_eDBD_HT-SELEX_2 		0.795 0.684
HOXC11
M05079_2.00 		Homo sapiens
NRTCGTWAAHN
NDTTWACGAYN		 SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_1 		0.795 0.684
HOXC11
M05080_2.00 		Homo sapiens
NDTTWATKRSN
NSYMATWAAHN		 SELEX
Yin et al.(2017)
HOXC11_FL_HT-SELEX_2 		0.795 0.684
HOXA11
M04899_2.00 		Homo sapiens
NRTCGTAAAWH
DWTTTACGAYN		 SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_1 		0.795 0.684
HOXA11
M04900_2.00 		Homo sapiens
DYTTTATKRCH
DGYMATAAARH		 SELEX
Yin et al.(2017)
HOXA11_eDBD_Methyl-HT-SELEX_2 		0.795 0.684
HOXC11
M05077_2.00 		Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_1 		0.795 0.684
HOXC11
M05078_2.00 		Homo sapiens
NDTTTATKRSN
NSYMATAAAHN		 SELEX
Yin et al.(2017)
HOXC11_eDBD_Methyl-HT-SELEX_2 		0.795 0.684
HOXC11
M05081_2.00 		Homo sapiens
NRTCGTWAANN
NNTTWACGAYN		 SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_1 		0.795 0.684
HOXC11
M05082_2.00 		Homo sapiens
NNTTWAYKRSN
NSYMRTWAANN		 SELEX
Yin et al.(2017)
HOXC11_FL_Methyl-HT-SELEX_2 		0.795 0.684
Hoxc10
M00421_2.00 		Mus musculus
TTWATKAB
VTMATWAA		 PBM
Berger et al.(2008)
Hoxc10_2779 		0.756 0.807
Hoxd10
M00509_2.00 		Mus musculus
NNNNNNNN
NNNNNNNN		 PBM
Berger et al.(2008)
Hoxd10_2368 		0.756 0.807
HOXC10
M03228_2.00 		Homo sapiens
DTTTWATKDB
VHMATWAAAH		 SELEX
Jolma et al.(2013)
HOXC10_1 		0.756 0.807
HOXC10
M03229_2.00 		Homo sapiens
NNTTWATKRB
VYMATWAANN		 SELEX
Jolma et al.(2013)
HOXC10_2 		0.756 0.807
HOXC10
M03230_2.00 		Homo sapiens
NWTTWAYGAB
VTCRTWAAWN		 SELEX
Jolma et al.(2013)
HOXC10_3 		0.756 0.807
Hoxc10
M03252_2.00 		Mus musculus
DTTTWAYGAY
RTCRTWAAAH		 SELEX
Jolma et al.(2013)
Hoxc10_1 		0.756 0.807
Hoxc10
M03253_2.00 		Mus musculus
DTTTWATKRY
RYMATWAAAH		 SELEX
Jolma et al.(2013)
Hoxc10_2 		0.756 0.807
HOXC10
M05335_2.00 		Homo sapiens
NDTTTATKRCN
NGYMATAAAHN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_1 		0.756 0.807
HOXC10
M05336_2.00 		Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_2 		0.756 0.807
HOXC10
M05339_2.00 		Homo sapiens
NTTTTATKRCN
NGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_1 		0.756 0.807
HOXC10
M05340_2.00 		Homo sapiens
NRTCGTAAAWN
NWTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_2 		0.756 0.807
HOXD10
M05112_2.00 		Homo sapiens
NKTTTATKRC
GYMATAAAMN		 SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_1 		0.756 0.807
HOXD10
M05113_2.00 		Homo sapiens
RTCGTAAAHN
NDTTTACGAY		 SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_2 		0.756 0.807
HOXD10
M05116_2.00 		Homo sapiens
RGTCGTAAAAH
DTTTTACGACY		 SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_1 		0.756 0.807
HOXD10
M05117_2.00 		Homo sapiens
RRYMATAAAAH
DTTTTATKRYY		 SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_2 		0.756 0.807
HOXD10
M10687_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD10_Q2 		0.756 0.807
HOXD10
M10688_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD10_Q6 		0.756 0.807
HOXC10
M05337_2.00 		Homo sapiens
NTTTTATKRCN
NGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_1 		0.756 0.807
HOXC10
M05338_2.00 		Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_2 		0.756 0.807
HOXC10
M05341_2.00 		Homo sapiens
DTTTTATKRCH
DGYMATAAAAH		 SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_1 		0.756 0.807
HOXC10
M05342_2.00 		Homo sapiens
VGTCGTAAAHN
NDTTTACGACB		 SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_2 		0.756 0.807
HOXD10
M05114_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_1 		0.756 0.807
HOXD10
M05115_2.00 		Homo sapiens
GTCGTAAAHN
NDTTTACGAC		 SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_2 		0.756 0.807
HOXD10
M05118_2.00 		Homo sapiens
VGTCGTAAAAH
DTTTTACGACB		 SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_1 		0.756 0.807
HOXD10
M05119_2.00 		Homo sapiens
DGYAATAAAAH
DTTTTATTRCH		 SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_2 		0.756 0.807
Hoxa10
M00382_2.00 		Mus musculus
NHWAYNNNN
NNNNRTWDN		 PBM
Berger et al.(2008)
Hoxa10_2318 		0.754 0.807
HOXA10
M05394_2.00 		Homo sapiens
RRTCGTAAAAH
DTTTTACGAYY		 SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_1 		0.754 0.807
HOXA10
M05395_2.00 		Homo sapiens
NTTTTATKRCY
RGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_2 		0.754 0.807
HOXA10
M05398_2.00 		Homo sapiens
NRTCRTWAANN
NNTTWAYGAYN		 SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_1 		0.754 0.807
HOXA10
M05399_2.00 		Homo sapiens
NNTTWATKRCN
NGYMATWAANN		 SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_2 		0.754 0.807
Hoxa10
M09170_2.00 		Mus musculus
DCATAAAYYRBH
DVYRRTTTATGH		 Misc
Kulakovskiy et al.(2013)
HXA10_MOUSE.H11MO.0.C 		0.754 0.807
Hoxa10
M10763_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA10_Q5 		0.754 0.807
HOXA10
M05396_2.00 		Homo sapiens
NGTCGTAAAWN
NWTTTACGACN		 SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_1 		0.754 0.807
HOXA10
M05397_2.00 		Homo sapiens
NTTTTATKRCB
VGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_2 		0.754 0.807
HOXA10
M05400_2.00 		Homo sapiens
NRTCGTWAANN
NNTTWACGAYN		 SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_1 		0.754 0.807
HOXA10
M05401_2.00 		Homo sapiens
NNTTWATKRYN
NRYMATWAANN		 SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_2 		0.754 0.807
Hoxd12_CONSTRUCT
M00538_2.00 		PBM CONSTRUCTS
NWTWAYNDBN
NVHNRTWAWN		 PBM
Berger et al.(2008)
Hoxd12_3481 		0.634 0.632
HOXD12
M03206_2.00 		Homo sapiens
SYAATAAAA
TTTTATTRS		 SELEX
Jolma et al.(2013)
HOXD12_1 		0.634 0.632
HOXD12
M03207_2.00 		Homo sapiens
RVTCGTAAAAH
DTTTTACGABY		 SELEX
Jolma et al.(2013)
HOXD12_2 		0.634 0.632
HOXD12
M03208_2.00 		Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN		 SELEX
Jolma et al.(2013)
HOXD12_3 		0.634 0.632
HOXD12
M03209_2.00 		Homo sapiens
DTTWATYRC
GYRATWAAH		 SELEX
Jolma et al.(2013)
HOXD12_4 		0.634 0.632
HOXD12
M05279_2.00 		Homo sapiens
NKTWACGAYN
NRTCGTWAMN		 SELEX
Yin et al.(2017)
HOXD12_eDBD_HT-SELEX 		0.634 0.632
HOXD12
M05280_2.00 		Homo sapiens
NRTCGTAAAH
DTTTACGAYN		 SELEX
Yin et al.(2017)
HOXD12_eDBD_Methyl-HT-SELEX 		0.634 0.632
Abd-B
M00554_2.00 		Drosophila melanogaster
NWTWAYDDNN
NNHHRTWAWN		 PBM
Busser et al.(2012a)
Abd-B 		0.634 0.737
Abd-B
M03772_2.00 		Drosophila melanogaster
DRTCRTAAAWH
DWTTTAYGAYH		 SELEX
Nitta et al.(2015)
Abd-B_1 		0.634 0.737
Abd-B
M03773_2.00 		Drosophila melanogaster
DTTTTATKRCY
RGYMATAAAAH		 SELEX
Nitta et al.(2015)
Abd-B_2 		0.634 0.737
Abd-B
M03774_2.00 		Drosophila melanogaster
NKCARYAACGACYW
WRGTCGTTRYTGMN		 SELEX
Nitta et al.(2015)
Abd-B_3 		0.634 0.737
Abd-B
M03775_2.00 		Drosophila melanogaster
DTTTWATGKSTTTY
RAAASMCATWAAAH		 SELEX
Nitta et al.(2015)
Abd-B_4 		0.634 0.737
Abd-B
M06476_2.00 		Drosophila melanogaster
TTTATKR
YMATAAA		 B1H
Mathelier et al.(2014)
MA0165.1 		0.634 0.737
Abd-B
M06211_2.00 		Drosophila melanogaster
YCATAAAA
TTTTATGR		 B1H
Zhu et al.(2011)
Abd-B_FlyReg_FBgn0000015 		0.634 0.737
Abd-B
M09672_2.00 		Drosophila melanogaster
YMATAAAAHH
DDTTTTATKR		 Misc
Kulakovskiy et al.(2009)
Abd-B 		0.634 0.737
Abd-B
M10779_2.00 		Drosophila melanogaster
VSNTTDATKRCNNN
NNNGYMATHAANSB		 Transfac
Matys et al.(2006)
I$ABDB_01 		0.634 0.737
Abd-B
M10780_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ABDB_Q6 		0.634 0.737
Q24782_9CNID
M02206_2.00 		Eleutheria dichotoma
TTAATTAA
TTAATTAA		 PBM
Weirauch et al.(2014)
pTH5486 		0.624 0.667
MEOX2
M03103_2.00 		Homo sapiens
NNTRATKASN
NSTMATYANN		 SELEX
Jolma et al.(2013)
MEOX2_1 		0.621 0.667
MEOX2
M03104_2.00 		Homo sapiens
NTAATTANVNTAATTAV
BTAATTANBNTAATTAN		 SELEX
Jolma et al.(2013)
MEOX2_2 		0.621 0.667
MEOX2
M03105_2.00 		Homo sapiens
HTAATGATGATKAN
NTMATCATCATTAD		 SELEX
Jolma et al.(2013)
MEOX2_3 		0.621 0.667
Meox2
M03271_2.00 		Mus musculus
NTAATKAN
NTMATTAN		 SELEX
Jolma et al.(2013)
Meox2_1 		0.621 0.667
MEOX2
M04988_2.00 		Homo sapiens
NTDAYGHB
VDCRTHAN		 SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_1 		0.621 0.667
MEOX2
M04989_2.00 		Homo sapiens
NTVATBRV
BYVATBAN		 SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_2 		0.621 0.667
Meox2
M10771_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MEOX2_05 		0.621 0.667
MEOX2
M04990_2.00 		Homo sapiens
NTAAYGHB
VDCRTTAN		 SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_1 		0.621 0.667
MEOX2
M04991_2.00 		Homo sapiens
NTVATKRN
NYMATBAN		 SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_2 		0.621 0.667
CBG23031
M01245_2.00 		Caenorhabditis briggsae
NTTWATKRNN
NNYMATWAAN		 PBM
Lambert et al.(2019)
pTH11458 		0.614 0.596
HXD12_HETFR
M02196_2.00 		Heterodontus francisci
TTWATKRC
GYMATWAA		 PBM
Weirauch et al.(2014)
pTH6533 		0.602 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000040839 Homeodomain 217 273

Links

Other Homeodomain family TFs
Other Takifugu rubripes TFs

965 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.000
nAv.1.0.1.g08553 Acanthocheilonema viteae nAv.1.0.1.g08553 I 0.000
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I 0.000
ACYPI003759 Acyrthosiphon pisum ACYPI003759 I 0.000
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I 0.000
ACYPI008450 Acyrthosiphon pisum ACYPI008450 I 0.000
AAEL013896 Aedes aegypti AAEL013896 I 0.000
ENSAMEG00000002899 Ailuropoda melanoleuca ENSAMEG00000002899 I 0.000
Alligator_sinensis_CCG001823.1 Alligator sinensis Alligator_sinensis_CCG001823.1 I 0.000
Alligator_sinensis_CCG008910.1 Alligator sinensis Alligator_sinensis_CCG008910.1 I 0.000
Aqu1.215833 Amphimedon queenslandica Aqu1.215833 I 0.000
Aqu1.215834 Amphimedon queenslandica Aqu1.215834 I 0.000
ENSAPLG00000003924 Anas platyrhynchos ENSAPLG00000003924 I 0.000
ANCCAN_20978 Ancylostoma caninum ANCCAN_20978 I 0.000
ANCCEY_04158 Ancylostoma ceylanicum ANCCEY_04158 N 0.000
ANCDUO_23180 Ancylostoma duodenale ANCDUO_23180 N 0.000
ASIM_0001219601 Anisakis simplex ASIM_0001219601 I 0.000
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.000
SMAD4 Anolis carolinensis ENSACAG00000010186 I 0.000
AALB009485 Anopheles albimanus AALB009485 I 0.000
AARA004719 Anopheles arabiensis AARA004719 I 0.000
AATE010695 Anopheles atroparvus AATE010695 I 0.000
ACHR000067 Anopheles christyi ACHR000067 I 0.000
ACOM037505 Anopheles coluzzii ACOM037505 I 0.000
ACUA025512 Anopheles culicifacies ACUA025512 I 0.000
ADAC007516 Anopheles darlingi ADAC007516 I 0.000
ADIR002761 Anopheles dirus ADIR002761 I 0.000
AEPI002385 Anopheles epiroticus AEPI002385 I 0.000
AFAF011208 Anopheles farauti AFAF011208 I 0.000
AFUN009864 Anopheles funestus AFUN009864 I 0.000
AGAP002902 Anopheles gambiae AGAP002902 I 0.000
AMAM019778 Anopheles maculatus AMAM019778 I 0.000
AMEM015931 Anopheles merus AMEM015931 I 0.000
AMIN000723 Anopheles minimus AMIN000723 I 0.000
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.000
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.000
GB50071 Apis mellifera GB50071 I 0.000
Afo_R008709 Aptenodytes forsteri Afo_R008709 I 0.000
ALUE_0001111401 Ascaris lumbricoides ALUE_0001111401 I 0.000
ASU_10605 Ascaris suum ASU_10605 I 0.000
ASU_13433 Ascaris suum ASU_13433 I 0.000
ENSAMXG00000017275 Astyanax mexicanus ENSAMXG00000017275 I 0.000
ENSAMXG00000018339 Astyanax mexicanus ENSAMXG00000018339 I 0.000
ENSAMXG00000019219 Astyanax mexicanus ENSAMXG00000019219 I 0.000
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.000
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.000
ENSP00000341551-D1 Bos grunniens ENSP00000341551-D1 I 0.000
SMAD4 Bos taurus ENSBTAG00000006919 I 0.000
e_gw.452.68.1 Branchiostoma floridae e_gw.452.68.1 I 0.000
fgenesh2_pg.scaffold_230000050 Branchiostoma floridae fgenesh2_pg.scaffold_230000050 I 0.000
Bm3575 Brugia malayi Bm3575 I 0.000
Bm5359 Brugia malayi Bm5359 I 0.000
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.000
BTMF_0000952301 Brugia timori BTMF_0000952301 I 0.000
Brh_R010414 Buceros rhinoceros Brh_R010414 I 0.000
BXY_0211100 Bursaphelenchus xylophilus BXY_0211100 N 0.000
CBN31444 Caenorhabditis brenneri CBN31444 I 0.000
CBG09090 Caenorhabditis briggsae CBG09090 I 0.000
sma-4 Caenorhabditis elegans WBGene00004858 D 0.000
CJA09693 Caenorhabditis japonica CJA09693 I 0.000
CRE04707 Caenorhabditis remanei CRE04707 I 0.000
SMAD4 Callithrix jacchus ENSCJAG00000001910 I 0.000
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.000
SMAD4 Canis familiaris ENSCAFG00000000164 I 0.000
CapteG179368 Capitella teleta CapteG179368 I 0.000
SMAD4 Cavia porcellus ENSCPOG00000006470 I 0.000
Cmyd_10005540 Chelonia mydas Cmyd_10005540 I 0.000
ENSCSAG00000018094 Chlorocebus sabaeus ENSCSAG00000018094 I 0.000
SMAD4 Choloepus hoffmanni ENSCHOG00000000860 I 0.000
CLEC002594 Cimex lectularius CLEC002594 I 0.000
smad4 Ciona intestinalis ENSCING00000005559 I 0.000
ENSCSAVG00000006480 Ciona savignyi ENSCSAVG00000006480 I 0.000
CGI_10018464 Crassostrea gigas CGI_10018464 I 0.000
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.000
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.000
KGM_12572 Danaus plexippus KGM_12572 I 0.000
SMAD4 Danio rerio ENSDARG00000012649 I 0.000
si:dkey-222b8.1 Danio rerio ENSDARG00000045094 I 0.000
si:dkey-239n17.4 Danio rerio ENSDARG00000070428 I 0.000
smad4a Danio rerio ENSDARG00000075226 I 0.000
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.000
SMAD4 Dasypus novemcinctus ENSDNOG00000005063 I 0.000
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.000
YQE_08737 Dendroctonus ponderosae YQE_08737 I 0.000
Smad4 Dipodomys ordii ENSDORG00000009089 I 0.000
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.000
nDi.2.2.2.g06233 Dirofilaria immitis nDi.2.2.2.g06233 I 0.000
GF22974 Drosophila ananassae FBgn0099968 I 0.000
GG11819 Drosophila erecta FBgn0104114 I 0.000
GH18642 Drosophila grimshawi FBgn0126109 I 0.000
Med Drosophila melanogaster FBgn0011655 D 0.000
GI23400 Drosophila mojavensis FBgn0146126 I 0.000
GL23637 Drosophila persimilis FBgn0161227 I 0.000
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.000
GM16436 Drosophila sechellia FBgn0171351 I 0.000
GJ23092 Drosophila virilis FBgn0210194 I 0.000
GK11724 Drosophila willistoni FBgn0213735 I 0.000
GE10952 Drosophila yakuba FBgn0228782 I 0.000
SMAD4 Echinops telfairi ENSETEG00000007750 I 0.000
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.000
EVEC_0000355201 Enterobius vermicularis EVEC_0000355201 I 0.000
SMAD4 Equus caballus ENSECAG00000017857 I 0.000
SMAD4 Felis catus ENSFCAG00000005257 I 0.000
ENSGMOG00000000297 Gadus morhua ENSGMOG00000000297 I 0.000
ENSGMOG00000005844 Gadus morhua ENSGMOG00000005844 I 0.000
ENSGMOG00000013964 Gadus morhua ENSGMOG00000013964 I 0.000
si:dkey-222b8.1 Gasterosteus aculeatus ENSGACG00000000538 I 0.000
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I 0.000
smad4a Gasterosteus aculeatus ENSGACG00000007495 I 0.000
ENSGACG00000016858 Gasterosteus aculeatus ENSGACG00000016858 I 0.000
Gfo_R011803 Geospiza fortis Gfo_R011803 I 0.000
Gfo_R016223 Geospiza fortis Gfo_R016223 I 0.000
GPLIN_000772200 Globodera pallida GPLIN_000772200 I 0.000
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.000
SMAD4 Gorilla gorilla ENSGGOG00000013662 I 0.000
HCOI00676200 Haemonchus contortus HCOI00676200 I 0.000
HHAL000393-PA Halyomorpha halys HHAL000393-PA I 0.000
HHAL000394-PA Halyomorpha halys HHAL000394-PA I 0.000
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.000
HMEL002203 Heliconius melpomene HMEL002203 I 0.000
HelroG76435 Helobdella robusta HelroG76435 I 0.000
HelroG88197 Helobdella robusta HelroG88197 I 0.000
SMAD4 Homo sapiens ENSG00000141646 D 0.000
XP_002161797.1 Hydra magnipapillata XP_002161797.1 I 0.000
ENSSTOG00000028580 Ictidomys tridecemlineatus ENSSTOG00000028580 I 0.000
ISCW018468 Ixodes scapularis ISCW018468 I 0.000
ENSLACG00000007810 Latimeria chalumnae ENSLACG00000007810 I 0.000
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.000
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.000
nLs.2.1.2.g01829 Litomosoides sigmodontis nLs.2.1.2.g01829 I 0.000
LOAG_05337 Loa loa LOAG_05337 I 0.000
LOAG_08923 Loa loa LOAG_08923 I 0.000
LotgiG131078 Lottia gigantea LotgiG131078 I 0.000
SMAD4 Loxodonta africana ENSLAFG00000012595 I 0.000
LCUP007928 Lucilia cuprina LCUP007928 I 0.000
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.000
ENSP00000381452 Macaca fascicularis ENSP00000381452 I 0.000
SMAD4 Macaca mulatta ENSMMUG00000018334 I 0.000
ENSMEUG00000001823 Macropus eugenii ENSMEUG00000001823 I 0.000
MCINX014520 Melitaea cinxia MCINX014520 I 0.000
genemark-nMf.1.1.scaf08549-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf08549-processed-gene-0.3 N 0.000
maker-nMf.1.1.scaf02670-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf02670-augustus-gene-0.3 I 0.000
MhA1_Contig1148.frz3.fgene1 Meloidogyne hapla MhA1_Contig1148.frz3.fgene1 N 0.000
Minc05381 Meloidogyne incognita Minc05381 I 0.000
Minc06628 Meloidogyne incognita Minc06628 I 0.000
Minc15475 Meloidogyne incognita Minc15475 N 0.000
ML02191a Mnemiopsis leidyi ML02191a I 0.000
SMAD4 Monodelphis domestica ENSMODG00000010995 I 0.000
MDOA012885 Musca domestica MDOA012885 I 0.000
ENSMPUG00000008776 Mustela putorius furo ENSMPUG00000008776 I 0.000
Smad4 Mus musculus ENSMUSG00000024515 D 0.000
Myotis_brandtii_Smad4_10005924 Myotis brandtii Myotis_brandtii_Smad4_10005924 I 0.000
SMAD4 Myotis lucifugus ENSMLUG00000013944 I 0.000
NV12984 Nasonia vitripennis NV12984 I 0.000
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I 0.000
ENSNLEG00000011859 Nomascus leucogenys ENSNLEG00000011859 I 0.000
SMAD4 Ochotona princeps ENSOPRG00000013601 I 0.000
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.000
OESDEN_03018 Oesophagostomum dentatum OESDEN_03018 I 0.000
OFLC_0000505301 Onchocerca flexuosa OFLC_0000505301 I 0.000
nOo.2.0.1.g06266 Onchocerca ochengi nOo.2.0.1.g06266 I 0.000
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.000
WBGene00245700 Onchocerca volvulus WBGene00245700 I 0.000
Ogr06720 Ophisaurus gracilis Ogr06720 I 0.000
Ogr14199 Ophisaurus gracilis Ogr14199 I 0.000
ENSONIG00000001557 Oreochromis niloticus ENSONIG00000001557 I 0.000
ENSONIG00000010360 Oreochromis niloticus ENSONIG00000010360 I 0.000
ENSONIG00000014036 Oreochromis niloticus ENSONIG00000014036 I 0.000
ENSONIG00000015035 Oreochromis niloticus ENSONIG00000015035 I 0.000
SMAD4 Ornithorhynchus anatinus ENSOANG00000008117 I 0.000
ENSOANG00000030959 Ornithorhynchus anatinus ENSOANG00000030959 I 0.000
SMAD4 Oryctolagus cuniculus ENSOCUG00000003929 I 0.000
smad4a Oryzias latipes ENSORLG00000005020 I 0.000
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.000
SMAD4 Otolemur garnettii ENSOGAG00000012081 I 0.000
ENSOARG00000004662 Ovis aries ENSOARG00000004662 I 0.000
SMAD4 Pan troglodytes ENSPTRG00000010028 I 0.000
ENSPANG00000024703 Papio anubis ENSPANG00000024703 I 0.000
PHUM002670 Pediculus humanus PHUM002670 I 0.000
ENSPSIG00000014614 Pelodiscus sinensis ENSPSIG00000014614 I 0.000
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I 0.000
ENSPMAG00000009414 Petromyzon marinus ENSPMAG00000009414 I 0.000
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.000
ENSPFOG00000018987 Poecilia formosa ENSPFOG00000018987 I 0.000
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.000
ENSPFOG00000019867 Poecilia formosa ENSPFOG00000019867 I 0.000
Pvit_01119 Pogona vitticeps Pvit_01119 I 0.000
ENSPPYG00000009165 Pongo abelii ENSPPYG00000009165 I 0.000
Smad4 Rattus norvegicus ENSRNOG00000051965 I 0.000
RPRC010188 Rhodnius prolixus RPRC010188 I 0.000
ENSSHAG00000010344 Sarcophilus harrisii ENSSHAG00000010344 I 0.000
SMU15015494 Schmidtea mediterranea SMU15015494 I 0.000
SINV15516 Solenopsis invicta SINV15516 I 0.000
L596_g15 Steinernema carpocapsae L596_g15 I 0.000
L596_g26024 Steinernema carpocapsae L596_g26024 I 0.000
L889_g22387 Steinernema feltiae L889_g22387 I 0.000
L889_g28104 Steinernema feltiae L889_g28104 I 0.000
L889_g6780 Steinernema feltiae L889_g6780 I 0.000
L893_g15056 Steinernema glaseri L893_g15056 I 0.000
L893_g344 Steinernema glaseri L893_g344 I 0.000
L893_g8358 Steinernema glaseri L893_g8358 N 0.000
L898_g17086 Steinernema monticolum L898_g17086 I 0.000
L898_g26477 Steinernema monticolum L898_g26477 I 0.000
L892_g19326 Steinernema scapterisci L892_g19326 N 0.000
L892_g27454 Steinernema scapterisci L892_g27454 I 0.000
L892_g4495 Steinernema scapterisci L892_g4495 I 0.000
SMAR013850 Strigamia maritima SMAR013850 I 0.000
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I 0.000
SVUK_0000938201 Strongylus vulgaris SVUK_0000938201 I 0.000
SMAD4 Sus scrofa ENSSSCG00000004524 I 0.000
si:dkey-222b8.1 Takifugu rubripes ENSTRUG00000004163 I 0.000
gb:cr929477 Takifugu rubripes ENSTRUG00000011769 I 0.000
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.000
ENSTSYG00000009792 Tarsius syrichta ENSTSYG00000009792 I 0.000
TELCIR_19676 Teladorsagia circumcincta TELCIR_19676 I 0.000
tetur10g00400 Tetranychus urticae tetur10g00400 I 0.000
gb:cr929477 Tetraodon nigroviridis ENSTNIG00000003193 I 0.000
si:dkey-222b8.1 Tetraodon nigroviridis ENSTNIG00000005007 I 0.000
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.000
TCLT_0000412001 Thelazia callipaeda TCLT_0000412001 I 0.000
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I 0.000
TC010848 Tribolium castaneum TC010848 I 0.000
D917_09719 Trichinella nativa D917_09719 I 0.000
EFV62078 Trichinella spiralis EFV62078 I 0.000
TriadG30731 Trichoplax adhaerens TriadG30731 I 0.000
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I 0.000
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.000
SMAD4 Tupaia belangeri ENSTBEG00000014105 I 0.000
SMAD4 Vicugna pacos ENSVPAG00000006757 I 0.000
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.000
WUBG_08631 Wuchereria bancrofti WUBG_08631 I 0.000
AAH84196 Xenopus laevis AAH84196 I 0.000
smad4.2.S Xenopus laevis XB-GENE-5995204 I 0.000
smad4.2.L Xenopus laevis XB-GENE-6256010 I 0.000
smad4.1.L Xenopus laevis XB-GENE-865543 I 0.000
smad4.1 Xenopus tropicalis XB-GENE-485691 I 0.000
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.000
ENSXMAG00000015245 Xiphophorus maculatus ENSXMAG00000015245 I 0.000
L798_13939 Zootermopsis nevadensis L798_13939 I 0.000