CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

HNAJ_0000396301 *(Hymenolepis nana)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox)	IPR001356	HNAJ_0000396301	T234356_2.00	WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
abd-A M03770_2.00	Drosophila melanogaster	NNTAATKRCN	NGYMATTANN	SELEX Nitta et al.(2015) abd-A_1	0.849	0.912
abd-A M03771_2.00	Drosophila melanogaster	NNTAATKRCN	NGYMATTANN	SELEX Nitta et al.(2015) abd-A_2	0.849	0.912
abd-A M06475_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0206.1	0.849	0.912
abd-A M06210_2.00	Drosophila melanogaster	WTWATKDM	KHMATWAW	B1H Zhu et al.(2011) Abd-A_FlyReg_FBgn0000014	0.849	0.912
abd-A M09671_2.00	Drosophila melanogaster	HTAATKRH	DYMATTAD	Misc Kulakovskiy et al.(2009) abd-A	0.849	0.912
abd-A M10778_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ABDA_Q6	0.849	0.912
Ubx M00558_2.00	Drosophila melanogaster	NWWAYDDNN	NNHHRTWWN	PBM Busser et al.(2012a) Ubx	0.845	0.877
Ubx M03804_2.00	Drosophila melanogaster	NTAATKRH	DYMATTAN	SELEX Nitta et al.(2015) Ubx_1	0.845	0.877
Ubx M06499_2.00	Drosophila melanogaster	NTTAATKR	YMATTAAN	B1H Mathelier et al.(2014) MA0094.2	0.845	0.877
Ubx M06273_2.00	Drosophila melanogaster	NTTAATKR	YMATTAAN	B1H Zhu et al.(2011) Ubx_Cell_FBgn0003944	0.845	0.877
Ubx M06274_2.00	Drosophila melanogaster	TAATKD	HMATTA	B1H Zhu et al.(2011) Ubx_FlyReg_FBgn0003944	0.845	0.877
Ubx M06275_2.00	Drosophila melanogaster	NTTWATKR	YMATWAAN	B1H Zhu et al.(2011) Ubx_SOLEXA_FBgn0003944	0.845	0.877
Ubx M09680_2.00	Drosophila melanogaster	TTAATKR	YMATTAA	Misc Kulakovskiy et al.(2009) Ubx	0.845	0.877
Ubx M10788_2.00	Drosophila melanogaster	NNVNNNNTAATKRNBHNND	HNNDVNYMATTANNNNBNN	Transfac Matys et al.(2006) I$UBX_01	0.845	0.877
Hoxb6 M00381_2.00	Mus musculus	NNDHNNN	NNNDHNN	PBM Berger et al.(2008) Hoxb6_3428	0.833	0.877
HOXB6 M04999_2.00	Homo sapiens	NTAATKRY	RYMATTAN	SELEX Yin et al.(2017) HOXB6_eDBD_HT-SELEX	0.833	0.877
HOXB6 M05000_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB6_eDBD_Methyl-HT-SELEX_1	0.833	0.877
HOXB6 M05001_2.00	Homo sapiens	NTWATKRB	VYMATWAN	SELEX Yin et al.(2017) HOXB6_eDBD_Methyl-HT-SELEX_2	0.833	0.877
Hoxa6 M00494_2.00	Mus musculus	NWWATKRNN	NNYMATWWN	PBM Berger et al.(2008) Hoxa6_1040	0.829	0.842
HOXA6 M04974_2.00	Homo sapiens	NNTAATKRVN	NBYMATTANN	SELEX Yin et al.(2017) HOXA6_eDBD_HT-SELEX	0.829	0.842
HOXA6 M04975_2.00	Homo sapiens	NNTAATKRBN	NVYMATTANN	SELEX Yin et al.(2017) HOXA6_eDBD_Methyl-HT-SELEX_1	0.829	0.842
HOXA6 M04976_2.00	Homo sapiens	NTAAYGRY	RYCRTTAN	SELEX Yin et al.(2017) HOXA6_eDBD_Methyl-HT-SELEX_2	0.829	0.842
Hoxd8 M00436_2.00	Mus musculus	NNWWYNNN	NNNRWWNN	PBM Berger et al.(2008) Hoxd8_2644	0.820	0.807
HOXD8 M03221_2.00	Homo sapiens	VHWAATKWDN	NHWMATTWDB	SELEX Jolma et al.(2013) HOXD8_1	0.820	0.807
HOXD8 M05310_2.00	Homo sapiens	BTAATKRY	RYMATTAV	SELEX Yin et al.(2017) HOXD8_eDBD_HT-SELEX	0.820	0.807
HOXD8 M05311_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXD8_eDBD_Methyl-HT-SELEX_1	0.820	0.807
HOXD8 M05312_2.00	Homo sapiens	NTWAYGRY	RYCRTWAN	SELEX Yin et al.(2017) HOXD8_eDBD_Methyl-HT-SELEX_2	0.820	0.807
Hoxb8 M00517_2.00	Mus musculus	NWWAYNDNN	NNHNRTWWN	PBM Berger et al.(2008) Hoxb8_3780	0.820	0.789
HOXB8 M05048_2.00	Homo sapiens	NTAATKRM	KYMATTAN	SELEX Yin et al.(2017) HOXB8_eDBD_HT-SELEX	0.820	0.789
HOXB8 M09141_2.00	Homo sapiens	BMATHAATCAA	TTGATTDATKV	Misc Kulakovskiy et al.(2013) HXB8_HUMAN.H11MO.0.C	0.820	0.789
Hoxb8 M09214_2.00	Mus musculus	BMATHAATCAA	TTGATTDATKV	Misc Kulakovskiy et al.(2013) HXB8_MOUSE.H11MO.0.C	0.820	0.789
HOXB8 M05049_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXB8_eDBD_Methyl-HT-SELEX_1	0.820	0.789
HOXB8 M05050_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB8_eDBD_Methyl-HT-SELEX_2	0.820	0.789
Hoxc6 M00392_2.00	Mus musculus	TTAATTAB	VTAATTAA	PBM Berger et al.(2008) Hoxc6_3954	0.816	0.842
HOXB7 M00334_2.00	Homo sapiens	NBRDNNN	NNNHYVN	PBM Barrera et al.(2016) HOXB7_REF	0.801	0.860
Hoxb7 M00481_2.00	Mus musculus	NNWAYNDN	NHNRTWNN	PBM Berger et al.(2008) Hoxb7_3953	0.801	0.860
HOXB7 M05404_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB7_eDBD_HT-SELEX	0.801	0.860
HOXB7 M05407_2.00	Homo sapiens	BBTAATTRCN	NGYAATTAVV	SELEX Yin et al.(2017) HOXB7_FL_HT-SELEX	0.801	0.860
HOXB7 M09166_2.00	Homo sapiens	MATHAATCAW	WTGATTDATK	Misc Kulakovskiy et al.(2013) HXB7_HUMAN.H11MO.0.C	0.801	0.860
Hoxb7 M09206_2.00	Mus musculus	MATHAATCAW	WTGATTDATK	Misc Kulakovskiy et al.(2013) HXB7_MOUSE.H11MO.0.C	0.801	0.860
HOXB7 M05405_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB7_eDBD_Methyl-HT-SELEX_1	0.801	0.860
HOXB7 M05406_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB7_eDBD_Methyl-HT-SELEX_2	0.801	0.860
HOXB7 M05408_2.00	Homo sapiens	NNTAATKRCN	NGYMATTANN	SELEX Yin et al.(2017) HOXB7_FL_Methyl-HT-SELEX_1	0.801	0.860
HOXB7 M05409_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB7_FL_Methyl-HT-SELEX_2	0.801	0.860
HOXB7 M00333_2.00	Homo sapiens	NHATWTATTN	NAATAWATDN	PBM Barrera et al.(2016) HOXB7_R189C	0.801	0.842
Hoxa7 M00476_2.00	Mus musculus	NNWAYNDNN	NNHNRTWNN	PBM Berger et al.(2008) Hoxa7_2668	0.797	0.842
Hoxa7 M00477_2.00	Mus musculus	NYHHYNNNN	NNNNRDDRN	PBM Berger et al.(2008) Hoxa7_3750	0.797	0.842
HOXA7 M05069_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXA7_eDBD_HT-SELEX	0.797	0.842
Antp M06549_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0166.1	0.797	0.842
Antp M06374_2.00	Drosophila melanogaster	YTTAATKA	TMATTAAR	B1H Zhu et al.(2011) Antp_Cell_FBgn0000095	0.797	0.842
Antp M06375_2.00	Drosophila melanogaster	WTAATW	AATTAW	B1H Zhu et al.(2011) Antp_FlyReg_FBgn0000095	0.797	0.842
Antp M06376_2.00	Drosophila melanogaster	NHTAATKR	YMATTADN	B1H Zhu et al.(2011) Antp_SOLEXA_FBgn0000095	0.797	0.842
Antp M09682_2.00	Drosophila melanogaster	TYTTWATKA	TMATWAARA	Misc Kulakovskiy et al.(2009) Antp	0.797	0.842
Antp M10789_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ANTP_Q6_01	0.797	0.842
HOXA7 M10679_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA7_01	0.797	0.842
HOXA7 M05070_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXA7_eDBD_Methyl-HT-SELEX_1	0.797	0.842
HOXA7 M05071_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA7_eDBD_Methyl-HT-SELEX_2	0.797	0.842
CBG00029 M01240_2.00	Caenorhabditis briggsae	ATTAATTA	TAATTAAT	PBM Lambert et al.(2019) pTH11471	0.790	0.754
Hoxc8 M00391_2.00	Mus musculus	NNDNYNNNN	NNNNRNHNN	PBM Berger et al.(2008) Hoxc8_3429	0.788	0.772
HOXC8 M04912_2.00	Homo sapiens	NYAATTRN	NYAATTRN	SELEX Yin et al.(2017) HOXC8_FL_HT-SELEX	0.788	0.772
HOXC8 M10636_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXC8_Q3	0.788	0.772
HOXC8 M04913_2.00	Homo sapiens	NYMATKRN	NYMATKRN	SELEX Yin et al.(2017) HOXC8_FL_Methyl-HT-SELEX_1	0.788	0.772
HOXC8 M04914_2.00	Homo sapiens	NTWAYGRY	RYCRTWAN	SELEX Yin et al.(2017) HOXC8_FL_Methyl-HT-SELEX_2	0.788	0.772
ftz M03795_2.00	Drosophila melanogaster	WTAATTRC	GYAATTAW	SELEX Nitta et al.(2015) ftz_1	0.787	0.737
ftz M06488_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0225.1	0.787	0.737
ftz M06247_2.00	Drosophila melanogaster	VTTAATKA	TMATTAAB	B1H Zhu et al.(2011) Ftz_Cell_FBgn0001077	0.787	0.737
ftz M06248_2.00	Drosophila melanogaster	TAATKRNH	DNYMATTA	B1H Zhu et al.(2011) ftz_FlyReg_FBgn0001077	0.787	0.737
ftz M06249_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Zhu et al.(2011) Ftz_SOLEXA_FBgn0001077	0.787	0.737
ftz M09679_2.00	Drosophila melanogaster	YTAATKRNN	NNYMATTAR	Misc Kulakovskiy et al.(2009) ftz	0.787	0.737
ftz M10787_2.00	Drosophila melanogaster	CTTAATTRBHBB	VVDVYAATTAAG	Transfac Matys et al.(2006) I$FTZ_01	0.787	0.737
Q8I9J5_9BILA M02214_2.00	Spadella cephaloptera	NVTAWTWABN	NVTWAWTABN	PBM Weirauch et al.(2014) pTH6164	0.753	0.684
HOXB7 M00331_2.00	Homo sapiens	NNNNNNY	RNNNNNN	PBM Barrera et al.(2016) HOXB7_K191R	0.745	0.842
HOXB7 M00332_2.00	Homo sapiens	NDWATATAYN	NRTATATWHN	PBM Barrera et al.(2016) HOXB7_M190L	0.725	0.842
CBG00023 M02062_2.00	Caenorhabditis briggsae	NWWATKDNNN	NNNHMATWWN	PBM Weirauch et al.(2014) pTH5778	0.719	0.596
egl-5 M09581_2.00	Caenorhabditis elegans	DWTTWATGGS	SCCATWAAWH	Misc Heinz et al.(2010) cElegans-L3-EGL5_modEncode	0.719	0.579
CBG23031 M01245_2.00	Caenorhabditis briggsae	NTTWATKRNN	NNYMATWAAN	PBM Lambert et al.(2019) pTH11458	0.649	0.491
Scr M03799_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) Scr_1	0.637	0.789
Scr M06496_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0203.1	0.637	0.789
Scr M06266_2.00	Drosophila melanogaster	HVYTAATKA	TMATTARBD	B1H Zhu et al.(2011) Scr_Cell_FBgn0003339	0.637	0.789
Scr M06267_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Scr_SOLEXA_FBgn0003339	0.637	0.789
Hoxa5 M00478_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxa5_3415	0.637	0.772
Hoxb5 M00480_2.00	Mus musculus	NWDWTNNNN	NNNNAWHWN	PBM Berger et al.(2008) Hoxb5_3122	0.637	0.772
HOXB5 M03125_2.00	Homo sapiens	NNKAATKRNN	NNYMATTMNN	SELEX Jolma et al.(2013) HOXB5_1	0.637	0.772
HOXA5 M04968_2.00	Homo sapiens	STAATKRS	SYMATTAS	SELEX Yin et al.(2017) HOXA5_eDBD_HT-SELEX	0.637	0.772
HOXA5 M04971_2.00	Homo sapiens	NTMATKRB	VYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_HT-SELEX	0.637	0.772
HOXB5 M05051_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXB5_eDBD_HT-SELEX	0.637	0.772
HOXB5 M05054_2.00	Homo sapiens	STMATKAB	VTMATKAS	SELEX Yin et al.(2017) HOXB5_FL_HT-SELEX	0.637	0.772
HOXA5 M10652_2.00	Homo sapiens	NGRDBKBDHNBAVTAATKRRGRDVDDDGSR	YSCHHHBHYCYYMATTABTVNDHVMVHYCN	Transfac Matys et al.(2006) V$HOX13_01	0.637	0.772
HOXA5 M08457_2.00	Homo sapiens	CDBWAATK	MATTWVHG	COMPILED Mathelier et al.(2014) MA0158.1	0.637	0.772
HOXA5 M04969_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_1	0.637	0.772
HOXA5 M04970_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_2	0.637	0.772
HOXA5 M04972_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_1	0.637	0.772
HOXA5 M04973_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_2	0.637	0.772
HOXB5 M05052_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_1	0.637	0.772
HOXB5 M05053_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_2	0.637	0.772
HOXB5 M05055_2.00	Homo sapiens	NTMATKAB	VTMATKAN	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_1	0.637	0.772
HOXB5 M05056_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_2	0.637	0.772
Hoxc5 M00422_2.00	Mus musculus	NWRATND	HNATYWN	PBM Berger et al.(2008) Hoxc5_2630	0.637	0.754
Hoxa10 M00382_2.00	Mus musculus	NHWAYNNNN	NNNNRTWDN	PBM Berger et al.(2008) Hoxa10_2318	0.631	0.667
Hoxd10 M00509_2.00	Mus musculus	NNNNNNNN	NNNNNNNN	PBM Berger et al.(2008) Hoxd10_2368	0.631	0.667
HOXA10 M05394_2.00	Homo sapiens	RRTCGTAAAAH	DTTTTACGAYY	SELEX Yin et al.(2017) HOXA10_eDBD_HT-SELEX_1	0.631	0.667
HOXA10 M05395_2.00	Homo sapiens	NTTTTATKRCY	RGYMATAAAAN	SELEX Yin et al.(2017) HOXA10_eDBD_HT-SELEX_2	0.631	0.667
HOXA10 M05398_2.00	Homo sapiens	NRTCRTWAANN	NNTTWAYGAYN	SELEX Yin et al.(2017) HOXA10_FL_HT-SELEX_1	0.631	0.667
HOXA10 M05399_2.00	Homo sapiens	NNTTWATKRCN	NGYMATWAANN	SELEX Yin et al.(2017) HOXA10_FL_HT-SELEX_2	0.631	0.667
HOXD10 M05112_2.00	Homo sapiens	NKTTTATKRC	GYMATAAAMN	SELEX Yin et al.(2017) HOXD10_eDBD_HT-SELEX_1	0.631	0.667
HOXD10 M05113_2.00	Homo sapiens	RTCGTAAAHN	NDTTTACGAY	SELEX Yin et al.(2017) HOXD10_eDBD_HT-SELEX_2	0.631	0.667
HOXD10 M05116_2.00	Homo sapiens	RGTCGTAAAAH	DTTTTACGACY	SELEX Yin et al.(2017) HOXD10_FL_HT-SELEX_1	0.631	0.667
HOXD10 M05117_2.00	Homo sapiens	RRYMATAAAAH	DTTTTATKRYY	SELEX Yin et al.(2017) HOXD10_FL_HT-SELEX_2	0.631	0.667
Hoxa10 M09170_2.00	Mus musculus	DCATAAAYYRBH	DVYRRTTTATGH	Misc Kulakovskiy et al.(2013) HXA10_MOUSE.H11MO.0.C	0.631	0.667
Hoxa10 M10763_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA10_Q5	0.631	0.667
HOXD10 M10687_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD10_Q2	0.631	0.667
HOXD10 M10688_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD10_Q6	0.631	0.667
HOXA10 M05396_2.00	Homo sapiens	NGTCGTAAAWN	NWTTTACGACN	SELEX Yin et al.(2017) HOXA10_eDBD_Methyl-HT-SELEX_1	0.631	0.667
HOXA10 M05397_2.00	Homo sapiens	NTTTTATKRCB	VGYMATAAAAN	SELEX Yin et al.(2017) HOXA10_eDBD_Methyl-HT-SELEX_2	0.631	0.667
HOXA10 M05400_2.00	Homo sapiens	NRTCGTWAANN	NNTTWACGAYN	SELEX Yin et al.(2017) HOXA10_FL_Methyl-HT-SELEX_1	0.631	0.667
HOXA10 M05401_2.00	Homo sapiens	NNTTWATKRYN	NRYMATWAANN	SELEX Yin et al.(2017) HOXA10_FL_Methyl-HT-SELEX_2	0.631	0.667
HOXD10 M05114_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD10_eDBD_Methyl-HT-SELEX_1	0.631	0.667
HOXD10 M05115_2.00	Homo sapiens	GTCGTAAAHN	NDTTTACGAC	SELEX Yin et al.(2017) HOXD10_eDBD_Methyl-HT-SELEX_2	0.631	0.667
HOXD10 M05118_2.00	Homo sapiens	VGTCGTAAAAH	DTTTTACGACB	SELEX Yin et al.(2017) HOXD10_FL_Methyl-HT-SELEX_1	0.631	0.667
HOXD10 M05119_2.00	Homo sapiens	DGYAATAAAAH	DTTTTATTRCH	SELEX Yin et al.(2017) HOXD10_FL_Methyl-HT-SELEX_2	0.631	0.667
Hoxc9 M00470_2.00	Mus musculus	NGTAATWAAN	NTTWATTACN	PBM Berger et al.(2008) Hoxc9_2367	0.626	0.667
Hoxa9 M00475_2.00	Mus musculus	NNDDBNNN	NNNVHHNN	PBM Berger et al.(2008) Hoxa9_2622	0.626	0.667
HOXA9 M03085_2.00	Homo sapiens	NNDTTWAYGAYN	NRTCRTWAAHNN	SELEX Jolma et al.(2013) HOXA10_1	0.626	0.667
HOXA9 M03086_2.00	Homo sapiens	NDTTWATKRYN	NRYMATWAAHN	SELEX Jolma et al.(2013) HOXA10_2	0.626	0.667
Hoxd9 M03282_2.00	Mus musculus	TTTWATKKB	VMMATWAAA	SELEX Jolma et al.(2013) Hoxd9_1	0.626	0.667
Hoxd9 M03283_2.00	Mus musculus	DWTTWATKRY	RYMATWAAWH	SELEX Jolma et al.(2013) Hoxd9_2	0.626	0.667
Hoxd9 M03284_2.00	Mus musculus	DTTWAYGRB	VYCRTWAAH	SELEX Jolma et al.(2013) Hoxd9_3	0.626	0.667
HOXA9 M04932_2.00	Homo sapiens	NNDWWABKRC	GYMVTWWHNN	SELEX Yin et al.(2017) HOXA9_FL_HT-SELEX_1	0.626	0.667
HOXA9 M04933_2.00	Homo sapiens	NNDTWAYGRB	VYCRTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_HT-SELEX_2	0.626	0.667
HOXC9 M05331_2.00	Homo sapiens	GTCGTAAAAN	NTTTTACGAC	SELEX Yin et al.(2017) HOXC9_FL_HT-SELEX_1	0.626	0.667
HOXC9 M05332_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXC9_FL_HT-SELEX_2	0.626	0.667
HOXD9 M05104_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD9_eDBD_HT-SELEX_1	0.626	0.667
HOXD9 M05105_2.00	Homo sapiens	RTCRTAAAWN	NWTTTAYGAY	SELEX Yin et al.(2017) HOXD9_eDBD_HT-SELEX_2	0.626	0.667
HOXD9 M05108_2.00	Homo sapiens	RTCGTAAAWN	NWTTTACGAY	SELEX Yin et al.(2017) HOXD9_FL_HT-SELEX_1	0.626	0.667
HOXD9 M05109_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD9_FL_HT-SELEX_2	0.626	0.667
Hoxc9 M08137_2.00	Mus musculus	NWGATTTATDGSH	DSCHATAAATCWN	ChIP-seq Mathelier et al.(2014) MA0485.1	0.626	0.667
Hoxa9 M08138_2.00	Mus musculus	TGATTKATKRB	VYMATMAATCA	ChIP-seq Mathelier et al.(2014) MA0594.1	0.626	0.667
HOXA9 M09130_2.00	Homo sapiens	DCATAAAYYRBH	DVYRRTTTATGH	Misc Kulakovskiy et al.(2013) HXA10_HUMAN.H11MO.0.C	0.626	0.667
HOXA9 M09131_2.00	Homo sapiens	HHATAAATCAH	DTGATTTATDD	Misc Kulakovskiy et al.(2013) HXA9_HUMAN.H11MO.0.B	0.626	0.667
HOXC9 M09161_2.00	Homo sapiens	HTTWATKGCH	DGCMATWAAD	Misc Kulakovskiy et al.(2013) HXC9_HUMAN.H11MO.0.C	0.626	0.667
Hoxa9 M09203_2.00	Mus musculus	HHATAAATCAH	DTGATTTATDD	Misc Kulakovskiy et al.(2013) HXA9_MOUSE.H11MO.0.B	0.626	0.667
Hoxa9 M09575_2.00	Mus musculus	WGATTKATDRBY	RVYHATMAATCW	Misc Heinz et al.(2010) HSC-Hoxa9_GSE33509	0.626	0.667
Hoxc9 M09574_2.00	Mus musculus	TGATTTATDGCH	DGCHATAAATCA	Misc Heinz et al.(2010) Ainv15-Hoxc9_GSE21812	0.626	0.667
HOXA9 M10642_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA10_Q6	0.626	0.667
HOXA9 M10643_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_04	0.626	0.667
HOXA9 M10644_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_Q5_01	0.626	0.667
HOXA9 M10645_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_Q5	0.626	0.667
HOXD9 M10686_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD9_Q2	0.626	0.667
HOXA9 M04934_2.00	Homo sapiens	NNDTWAYKRC	GYMRTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_Methyl-HT-SELEX_1	0.626	0.667
HOXA9 M04935_2.00	Homo sapiens	NNDTWACGAY	RTCGTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_Methyl-HT-SELEX_2	0.626	0.667
HOXC9 M05333_2.00	Homo sapiens	RTCGTAAAHN	NDTTTACGAY	SELEX Yin et al.(2017) HOXC9_FL_Methyl-HT-SELEX_1	0.626	0.667
HOXC9 M05334_2.00	Homo sapiens	NTTTWATKRC	GYMATWAAAN	SELEX Yin et al.(2017) HOXC9_FL_Methyl-HT-SELEX_2	0.626	0.667
HOXD9 M05106_2.00	Homo sapiens	NNTTWATKRC	GYMATWAANN	SELEX Yin et al.(2017) HOXD9_eDBD_Methyl-HT-SELEX_1	0.626	0.667
HOXD9 M05107_2.00	Homo sapiens	RTCGTAAANN	NNTTTACGAY	SELEX Yin et al.(2017) HOXD9_eDBD_Methyl-HT-SELEX_2	0.626	0.667
HOXD9 M05110_2.00	Homo sapiens	RTCGTAAANN	NNTTTACGAY	SELEX Yin et al.(2017) HOXD9_FL_Methyl-HT-SELEX_1	0.626	0.667
HOXD9 M05111_2.00	Homo sapiens	NDTTWATKRC	GYMATWAAHN	SELEX Yin et al.(2017) HOXD9_FL_Methyl-HT-SELEX_2	0.626	0.667
Hoxb9 M00410_2.00	Mus musculus	NTTWAYDDNN	NNHHRTWAAN	PBM Berger et al.(2008) Hoxb9_3413	0.626	0.649
HOXB9 M05289_2.00	Homo sapiens	RTCRTAAAWN	NWTTTAYGAY	SELEX Yin et al.(2017) HOXB9_eDBD_HT-SELEX_1	0.626	0.649
HOXB9 M05290_2.00	Homo sapiens	NTTTWATKRC	GYMATWAAAN	SELEX Yin et al.(2017) HOXB9_eDBD_HT-SELEX_2	0.626	0.649
HOXB9 M05291_2.00	Homo sapiens	GTCGTAAAHB	VDTTTACGAC	SELEX Yin et al.(2017) HOXB9_eDBD_Methyl-HT-SELEX	0.626	0.649
CG34031 M02126_2.00	Drosophila melanogaster	NNNDNNRN	NYNNHNNN	PBM Weirauch et al.(2014) pTH6447	0.625	0.526
CG34031 M06548_2.00	Drosophila melanogaster	TTAATWG	CWATTAA	B1H Mathelier et al.(2014) MA0444.1	0.625	0.526
CG34031 M06372_2.00	Drosophila melanogaster	BTTAATWG	CWATTAAV	B1H Zhu et al.(2011) CG34031_Cell_FBgn0054031	0.625	0.526
CG34031 M06373_2.00	Drosophila melanogaster	NTTAATDR	YHATTAAN	B1H Zhu et al.(2011) CG34031_SOLEXA_FBgn0054031	0.625	0.526
Hoxc10 M00421_2.00	Mus musculus	TTWATKAB	VTMATWAA	PBM Berger et al.(2008) Hoxc10_2779	0.619	0.649
HOXC10 M03228_2.00	Homo sapiens	DTTTWATKDB	VHMATWAAAH	SELEX Jolma et al.(2013) HOXC10_1	0.619	0.649
HOXC10 M03229_2.00	Homo sapiens	NNTTWATKRB	VYMATWAANN	SELEX Jolma et al.(2013) HOXC10_2	0.619	0.649
HOXC10 M03230_2.00	Homo sapiens	NWTTWAYGAB	VTCRTWAAWN	SELEX Jolma et al.(2013) HOXC10_3	0.619	0.649
Hoxc10 M03252_2.00	Mus musculus	DTTTWAYGAY	RTCRTWAAAH	SELEX Jolma et al.(2013) Hoxc10_1	0.619	0.649
Hoxc10 M03253_2.00	Mus musculus	DTTTWATKRY	RYMATWAAAH	SELEX Jolma et al.(2013) Hoxc10_2	0.619	0.649
HOXC10 M05335_2.00	Homo sapiens	NDTTTATKRCN	NGYMATAAAHN	SELEX Yin et al.(2017) HOXC10_eDBD_HT-SELEX_1	0.619	0.649
HOXC10 M05336_2.00	Homo sapiens	NRTCGTAAAHN	NDTTTACGAYN	SELEX Yin et al.(2017) HOXC10_eDBD_HT-SELEX_2	0.619	0.649
HOXC10 M05339_2.00	Homo sapiens	NTTTTATKRCN	NGYMATAAAAN	SELEX Yin et al.(2017) HOXC10_FL_HT-SELEX_1	0.619	0.649
HOXC10 M05340_2.00	Homo sapiens	NRTCGTAAAWN	NWTTTACGAYN	SELEX Yin et al.(2017) HOXC10_FL_HT-SELEX_2	0.619	0.649
HOXC10 M05337_2.00	Homo sapiens	NTTTTATKRCN	NGYMATAAAAN	SELEX Yin et al.(2017) HOXC10_eDBD_Methyl-HT-SELEX_1	0.619	0.649
HOXC10 M05338_2.00	Homo sapiens	NRTCGTAAAHN	NDTTTACGAYN	SELEX Yin et al.(2017) HOXC10_eDBD_Methyl-HT-SELEX_2	0.619	0.649
HOXC10 M05341_2.00	Homo sapiens	DTTTTATKRCH	DGYMATAAAAH	SELEX Yin et al.(2017) HOXC10_FL_Methyl-HT-SELEX_1	0.619	0.649
HOXC10 M05342_2.00	Homo sapiens	VGTCGTAAAHN	NDTTTACGACB	SELEX Yin et al.(2017) HOXC10_FL_Methyl-HT-SELEX_2	0.619	0.649
Abd-B M00554_2.00	Drosophila melanogaster	NWTWAYDDNN	NNHHRTWAWN	PBM Busser et al.(2012a) Abd-B	0.616	0.632
Abd-B M03772_2.00	Drosophila melanogaster	DRTCRTAAAWH	DWTTTAYGAYH	SELEX Nitta et al.(2015) Abd-B_1	0.616	0.632
Abd-B M03773_2.00	Drosophila melanogaster	DTTTTATKRCY	RGYMATAAAAH	SELEX Nitta et al.(2015) Abd-B_2	0.616	0.632
Abd-B M03774_2.00	Drosophila melanogaster	NKCARYAACGACYW	WRGTCGTTRYTGMN	SELEX Nitta et al.(2015) Abd-B_3	0.616	0.632
Abd-B M03775_2.00	Drosophila melanogaster	DTTTWATGKSTTTY	RAAASMCATWAAAH	SELEX Nitta et al.(2015) Abd-B_4	0.616	0.632
Abd-B M06476_2.00	Drosophila melanogaster	TTTATKR	YMATAAA	B1H Mathelier et al.(2014) MA0165.1	0.616	0.632
Abd-B M06211_2.00	Drosophila melanogaster	YCATAAAA	TTTTATGR	B1H Zhu et al.(2011) Abd-B_FlyReg_FBgn0000015	0.616	0.632
Abd-B M09672_2.00	Drosophila melanogaster	YMATAAAAHH	DDTTTTATKR	Misc Kulakovskiy et al.(2009) Abd-B	0.616	0.632
Abd-B M10779_2.00	Drosophila melanogaster	VSNTTDATKRCNNN	NNNGYMATHAANSB	Transfac Matys et al.(2006) I$ABDB_01	0.616	0.632
Abd-B M10780_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ABDB_Q6	0.616	0.632
ceh-19 M02180_2.00	Caenorhabditis elegans	NTWAWDRNN	NNYHWTWAN	PBM Weirauch et al.(2014) pTH5661	0.614	0.544
HOXC4 M00328_2.00	Homo sapiens	YTAATTAB	VTAATTAR	PBM Barrera et al.(2016) HOXC4_N178S	0.609	0.807
HOXC4 M00330_2.00	Homo sapiens	YTAATTRB	VYAATTAR	PBM Barrera et al.(2016) HOXC4_REF	0.609	0.789
Hoxc4 M00530_2.00	Mus musculus	NWAATNDNN	NNHNATTWN	PBM Berger et al.(2008) Hoxc4_3491	0.609	0.789
HOXC4 M05385_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_HT-SELEX	0.609	0.789
HOXC4 M05386_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_1	0.609	0.789
HOXC4 M05387_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_2	0.609	0.789
Mnx1 M00388_2.00	Mus musculus	NTAATBDNNN	NNNHVATTAN	PBM Berger et al.(2008) Hlxb9_3422	0.603	0.561
MNX1 M03143_2.00	Homo sapiens	NHTAATTRNH	DNYAATTADN	SELEX Jolma et al.(2013) MNX1_1	0.603	0.561
MNX1 M05126_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_HT-SELEX	0.603	0.561
MNX1 M05127_2.00	Homo sapiens	HTAAYGHB	VDCRTTAD	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_1	0.603	0.561
MNX1 M05128_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_2	0.603	0.561
zen2 M02118_2.00	Drosophila melanogaster	NNTAATKRNN	NNYMATTANN	PBM Weirauch et al.(2014) pTH5479	0.600	0.632
zen2 M03806_2.00	Drosophila melanogaster	BTAATKAS	STMATTAV	SELEX Nitta et al.(2015) zen2_1	0.600	0.632
zen2 M03807_2.00	Drosophila melanogaster	BTAATKWNNVRNNNNYBNNWMATTAV	BTAATKWNNVRNNNNYBNNWMATTAV	SELEX Nitta et al.(2015) zen2_2	0.600	0.632
zen2 M06501_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0257.1	0.600	0.632
zen2 M06279_2.00	Drosophila melanogaster	HNBTAATKA	TMATTAVND	B1H Zhu et al.(2011) Zen2_Cell_FBgn0004054	0.600	0.632
zen2 M06280_2.00	Drosophila melanogaster	NNNTAATKRN	NYMATTANNN	B1H Zhu et al.(2011) zen2_SOLEXA_2_FBgn0004054	0.600	0.632
zen2 M06281_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Zen2_SOLEXA_FBgn0004054	0.600	0.632
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
HNAJ_0000396301-mRNA-1	Homeodomain	17	73	RRGRQTYSRFQTLELEKEFQYSHYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKLKK

Links
Other Homeodomain family TFs
Other *Hymenolepis nana* TFs

1922 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
nAv.1.0.1.g00430	Acanthocheilonema viteae	nAv.1.0.1.g00430	I	0.000
nAv.1.0.1.g08553	Acanthocheilonema viteae	nAv.1.0.1.g08553	I	0.000
ACYPI000365	Acyrthosiphon pisum	ACYPI000365	I	0.000
ACYPI003759	Acyrthosiphon pisum	ACYPI003759	I	0.000
ACYPI005550	Acyrthosiphon pisum	ACYPI005550	I	0.000
ACYPI008450	Acyrthosiphon pisum	ACYPI008450	I	0.000
AAEL013896	Aedes aegypti	AAEL013896	I	0.000
ENSAMEG00000002899	Ailuropoda melanoleuca	ENSAMEG00000002899	I	0.000
Alligator_sinensis_CCG001823.1	Alligator sinensis	Alligator_sinensis_CCG001823.1	I	0.000
Alligator_sinensis_CCG008910.1	Alligator sinensis	Alligator_sinensis_CCG008910.1	I	0.000
Aqu1.215833	Amphimedon queenslandica	Aqu1.215833	I	0.000
Aqu1.215834	Amphimedon queenslandica	Aqu1.215834	I	0.000
ENSAPLG00000003924	Anas platyrhynchos	ENSAPLG00000003924	I	0.000
ANCCAN_20978	Ancylostoma caninum	ANCCAN_20978	I	0.000
ANCCEY_04158	Ancylostoma ceylanicum	ANCCEY_04158	N	0.000
ANCDUO_23180	Ancylostoma duodenale	ANCDUO_23180	N	0.000
ASIM_0001219601	Anisakis simplex	ASIM_0001219601	I	0.000
ASIM_0001604001	Anisakis simplex	ASIM_0001604001	I	0.000
SMAD4	Anolis carolinensis	ENSACAG00000010186	I	0.000
AALB009485	Anopheles albimanus	AALB009485	I	0.000
AARA004719	Anopheles arabiensis	AARA004719	I	0.000
AATE010695	Anopheles atroparvus	AATE010695	I	0.000
ACHR000067	Anopheles christyi	ACHR000067	I	0.000
ACOM037505	Anopheles coluzzii	ACOM037505	I	0.000
ACUA025512	Anopheles culicifacies	ACUA025512	I	0.000
ADAC007516	Anopheles darlingi	ADAC007516	I	0.000
ADIR002761	Anopheles dirus	ADIR002761	I	0.000
AEPI002385	Anopheles epiroticus	AEPI002385	I	0.000
AFAF011208	Anopheles farauti	AFAF011208	I	0.000
AFUN009864	Anopheles funestus	AFUN009864	I	0.000
AGAP002902	Anopheles gambiae	AGAP002902	I	0.000
AMAM019778	Anopheles maculatus	AMAM019778	I	0.000
AMEM015931	Anopheles merus	AMEM015931	I	0.000
AMIN000723	Anopheles minimus	AMIN000723	I	0.000
AQUA009305	Anopheles quadriannulatus	AQUA009305	I	0.000
ASTEI00079	Anopheles stephensi	ASTEI00079	I	0.000
GB50071	Apis mellifera	GB50071	I	0.000
Afo_R008709	Aptenodytes forsteri	Afo_R008709	I	0.000
ALUE_0001111401	Ascaris lumbricoides	ALUE_0001111401	I	0.000
ASU_10605	Ascaris suum	ASU_10605	I	0.000
ASU_13433	Ascaris suum	ASU_13433	I	0.000
ENSAMXG00000017275	Astyanax mexicanus	ENSAMXG00000017275	I	0.000
ENSAMXG00000018339	Astyanax mexicanus	ENSAMXG00000018339	I	0.000
ENSAMXG00000019219	Astyanax mexicanus	ENSAMXG00000019219	I	0.000
BGLB014287	Biomphalaria glabrata	BGLB014287	I	0.000
BGIBMGA010110	Bombyx mori	BGIBMGA010110	I	0.000
ENSP00000341551-D1	Bos grunniens	ENSP00000341551-D1	I	0.000
SMAD4	Bos taurus	ENSBTAG00000006919	I	0.000
e_gw.452.68.1	Branchiostoma floridae	e_gw.452.68.1	I	0.000
fgenesh2_pg.scaffold_230000050	Branchiostoma floridae	fgenesh2_pg.scaffold_230000050	I	0.000
Bm3575	Brugia malayi	Bm3575	I	0.000
Bm5359	Brugia malayi	Bm5359	I	0.000
BTMF_0000404601	Brugia timori	BTMF_0000404601	I	0.000
BTMF_0000952301	Brugia timori	BTMF_0000952301	I	0.000
Brh_R010414	Buceros rhinoceros	Brh_R010414	I	0.000
BXY_0211100	Bursaphelenchus xylophilus	BXY_0211100	N	0.000
CBN31444	Caenorhabditis brenneri	CBN31444	I	0.000
CBG09090	Caenorhabditis briggsae	CBG09090	I	0.000
sma-4	Caenorhabditis elegans	WBGene00004858	D	0.000
CJA09693	Caenorhabditis japonica	CJA09693	I	0.000
CRE04707	Caenorhabditis remanei	CRE04707	I	0.000
SMAD4	Callithrix jacchus	ENSCJAG00000001910	I	0.000
Cflo_07183--XP_392838.3_APIME	Camponotus floridanus	Cflo_07183--XP_392838.3_APIME	I	0.000
SMAD4	Canis familiaris	ENSCAFG00000000164	I	0.000
CapteG179368	Capitella teleta	CapteG179368	I	0.000
SMAD4	Cavia porcellus	ENSCPOG00000006470	I	0.000
Cmyd_10005540	Chelonia mydas	Cmyd_10005540	I	0.000
ENSCSAG00000018094	Chlorocebus sabaeus	ENSCSAG00000018094	I	0.000
SMAD4	Choloepus hoffmanni	ENSCHOG00000000860	I	0.000
CLEC002594	Cimex lectularius	CLEC002594	I	0.000
smad4	Ciona intestinalis	ENSCING00000005559	I	0.000
ENSCSAVG00000006480	Ciona savignyi	ENSCSAVG00000006480	I	0.000
CGI_10018464	Crassostrea gigas	CGI_10018464	I	0.000
CpipJ_CPIJ002563	Culex pipiens	CpipJ_CPIJ002563	I	0.000
CPIJ002563	Culex quinquefasciatus	CPIJ002563	I	0.000
KGM_12572	Danaus plexippus	KGM_12572	I	0.000
SMAD4	Danio rerio	ENSDARG00000012649	I	0.000
si:dkey-222b8.1	Danio rerio	ENSDARG00000045094	I	0.000
si:dkey-239n17.4	Danio rerio	ENSDARG00000070428	I	0.000
smad4a	Danio rerio	ENSDARG00000075226	I	0.000
DAPPUDRAFT_304115	Daphnia pulex	DAPPUDRAFT_304115	I	0.000
SMAD4	Dasypus novemcinctus	ENSDNOG00000005063	I	0.000
YQE_06624	Dendroctonus ponderosae	YQE_06624	I	0.000
YQE_08737	Dendroctonus ponderosae	YQE_08737	I	0.000
Smad4	Dipodomys ordii	ENSDORG00000009089	I	0.000
nDi.2.2.2.g01429	Dirofilaria immitis	nDi.2.2.2.g01429	I	0.000
nDi.2.2.2.g06233	Dirofilaria immitis	nDi.2.2.2.g06233	I	0.000
GF22974	Drosophila ananassae	FBgn0099968	I	0.000
GG11819	Drosophila erecta	FBgn0104114	I	0.000
GH18642	Drosophila grimshawi	FBgn0126109	I	0.000
Med	Drosophila melanogaster	FBgn0011655	D	0.000
GI23400	Drosophila mojavensis	FBgn0146126	I	0.000
GL23637	Drosophila persimilis	FBgn0161227	I	0.000
GA14643	Drosophila pseudoobscura	FBgn0074670	I	0.000
GM16436	Drosophila sechellia	FBgn0171351	I	0.000
GJ23092	Drosophila virilis	FBgn0210194	I	0.000
GK11724	Drosophila willistoni	FBgn0213735	I	0.000
GE10952	Drosophila yakuba	FBgn0228782	I	0.000
SMAD4	Echinops telfairi	ENSETEG00000007750	I	0.000
EEL_0000707501	Elaeophora elaphi	EEL_0000707501	I	0.000
EVEC_0000355201	Enterobius vermicularis	EVEC_0000355201	I	0.000
SMAD4	Equus caballus	ENSECAG00000017857	I	0.000
SMAD4	Felis catus	ENSFCAG00000005257	I	0.000
ENSGMOG00000000297	Gadus morhua	ENSGMOG00000000297	I	0.000
ENSGMOG00000005844	Gadus morhua	ENSGMOG00000005844	I	0.000
ENSGMOG00000013964	Gadus morhua	ENSGMOG00000013964	I	0.000
si:dkey-222b8.1	Gasterosteus aculeatus	ENSGACG00000000538	I	0.000
ENSGACG00000003171	Gasterosteus aculeatus	ENSGACG00000003171	I	0.000
smad4a	Gasterosteus aculeatus	ENSGACG00000007495	I	0.000
ENSGACG00000016858	Gasterosteus aculeatus	ENSGACG00000016858	I	0.000
Gfo_R011803	Geospiza fortis	Gfo_R011803	I	0.000
Gfo_R016223	Geospiza fortis	Gfo_R016223	I	0.000
GPLIN_000772200	Globodera pallida	GPLIN_000772200	I	0.000
GPUH_0001329001	Gongylonema pulchrum	GPUH_0001329001	I	0.000
SMAD4	Gorilla gorilla	ENSGGOG00000013662	I	0.000
HCOI00676200	Haemonchus contortus	HCOI00676200	I	0.000
HHAL000393-PA	Halyomorpha halys	HHAL000393-PA	I	0.000
HHAL000394-PA	Halyomorpha halys	HHAL000394-PA	I	0.000
Hsal_09633--XP_392838.3_APIME	Harpegnathos saltator	Hsal_09633--XP_392838.3_APIME	I	0.000
HMEL002203	Heliconius melpomene	HMEL002203	I	0.000
HelroG76435	Helobdella robusta	HelroG76435	I	0.000
HelroG88197	Helobdella robusta	HelroG88197	I	0.000
SMAD4	Homo sapiens	ENSG00000141646	D	0.000
XP_002161797.1	Hydra magnipapillata	XP_002161797.1	I	0.000
ENSSTOG00000028580	Ictidomys tridecemlineatus	ENSSTOG00000028580	I	0.000
ISCW018468	Ixodes scapularis	ISCW018468	I	0.000
ENSLACG00000007810	Latimeria chalumnae	ENSLACG00000007810	I	0.000
LDEC015949	Leptinotarsa decemlineata	LDEC015949	I	0.000
nLs.2.1.2.g01457	Litomosoides sigmodontis	nLs.2.1.2.g01457	I	0.000
nLs.2.1.2.g01829	Litomosoides sigmodontis	nLs.2.1.2.g01829	I	0.000
LOAG_05337	Loa loa	LOAG_05337	I	0.000
LOAG_08923	Loa loa	LOAG_08923	I	0.000
LotgiG131078	Lottia gigantea	LotgiG131078	I	0.000
SMAD4	Loxodonta africana	ENSLAFG00000012595	I	0.000
LCUP007928	Lucilia cuprina	LCUP007928	I	0.000
LLOJ008806	Lutzomyia longipalpis	LLOJ008806	I	0.000
ENSP00000381452	Macaca fascicularis	ENSP00000381452	I	0.000
SMAD4	Macaca mulatta	ENSMMUG00000018334	I	0.000
ENSMEUG00000001823	Macropus eugenii	ENSMEUG00000001823	I	0.000
MCINX014520	Melitaea cinxia	MCINX014520	I	0.000
genemark-nMf.1.1.scaf08549-processed-gene-0.3	Meloidogyne floridensis	genemark-nMf.1.1.scaf08549-processed-gene-0.3	N	0.000
maker-nMf.1.1.scaf02670-augustus-gene-0.3	Meloidogyne floridensis	maker-nMf.1.1.scaf02670-augustus-gene-0.3	I	0.000
MhA1_Contig1148.frz3.fgene1	Meloidogyne hapla	MhA1_Contig1148.frz3.fgene1	N	0.000
Minc05381	Meloidogyne incognita	Minc05381	I	0.000
Minc06628	Meloidogyne incognita	Minc06628	I	0.000
Minc15475	Meloidogyne incognita	Minc15475	N	0.000
ML02191a	Mnemiopsis leidyi	ML02191a	I	0.000
SMAD4	Monodelphis domestica	ENSMODG00000010995	I	0.000
MDOA012885	Musca domestica	MDOA012885	I	0.000
ENSMPUG00000008776	Mustela putorius furo	ENSMPUG00000008776	I	0.000
Smad4	Mus musculus	ENSMUSG00000024515	D	0.000
Myotis_brandtii_Smad4_10005924	Myotis brandtii	Myotis_brandtii_Smad4_10005924	I	0.000
SMAD4	Myotis lucifugus	ENSMLUG00000013944	I	0.000
NV12984	Nasonia vitripennis	NV12984	I	0.000
NEMVEDRAFT_v1g248037	Nematostella vectensis	NEMVEDRAFT_v1g248037	I	0.000
ENSNLEG00000011859	Nomascus leucogenys	ENSNLEG00000011859	I	0.000
SMAD4	Ochotona princeps	ENSOPRG00000013601	I	0.000
Ocbimv22032358m.g	Octopus bimaculoides	Ocbimv22032358m.g	I	0.000
OESDEN_03018	Oesophagostomum dentatum	OESDEN_03018	I	0.000
OFLC_0000505301	Onchocerca flexuosa	OFLC_0000505301	I	0.000
nOo.2.0.1.g00181	Onchocerca ochengi	nOo.2.0.1.g00181	I	0.000
nOo.2.0.1.g06266	Onchocerca ochengi	nOo.2.0.1.g06266	I	0.000
WBGene00245700	Onchocerca volvulus	WBGene00245700	I	0.000
Ogr06720	Ophisaurus gracilis	Ogr06720	I	0.000
Ogr14199	Ophisaurus gracilis	Ogr14199	I	0.000
ENSONIG00000001557	Oreochromis niloticus	ENSONIG00000001557	I	0.000
ENSONIG00000010360	Oreochromis niloticus	ENSONIG00000010360	I	0.000
ENSONIG00000014036	Oreochromis niloticus	ENSONIG00000014036	I	0.000
ENSONIG00000015035	Oreochromis niloticus	ENSONIG00000015035	I	0.000
SMAD4	Ornithorhynchus anatinus	ENSOANG00000008117	I	0.000
ENSOANG00000030959	Ornithorhynchus anatinus	ENSOANG00000030959	I	0.000
SMAD4	Oryctolagus cuniculus	ENSOCUG00000003929	I	0.000
smad4a	Oryzias latipes	ENSORLG00000005020	I	0.000
SMAD4	Oryzias latipes	ENSORLG00000007703	I	0.000
SMAD4	Otolemur garnettii	ENSOGAG00000012081	I	0.000
ENSOARG00000004662	Ovis aries	ENSOARG00000004662	I	0.000
SMAD4	Pan troglodytes	ENSPTRG00000010028	I	0.000
ENSPANG00000024703	Papio anubis	ENSPANG00000024703	I	0.000
PHUM002670	Pediculus humanus	PHUM002670	I	0.000
ENSPSIG00000014614	Pelodiscus sinensis	ENSPSIG00000014614	I	0.000
ENSPMAG00000008404	Petromyzon marinus	ENSPMAG00000008404	I	0.000
ENSPMAG00000009414	Petromyzon marinus	ENSPMAG00000009414	I	0.000
PPAI002168	Phlebotomus papatasi	PPAI002168	I	0.000
ENSPFOG00000018987	Poecilia formosa	ENSPFOG00000018987	I	0.000
ENSPFOG00000019807	Poecilia formosa	ENSPFOG00000019807	I	0.000
ENSPFOG00000019867	Poecilia formosa	ENSPFOG00000019867	I	0.000
Pvit_01119	Pogona vitticeps	Pvit_01119	I	0.000
ENSPPYG00000009165	Pongo abelii	ENSPPYG00000009165	I	0.000
Smad4	Rattus norvegicus	ENSRNOG00000051965	I	0.000
RPRC010188	Rhodnius prolixus	RPRC010188	I	0.000
ENSSHAG00000010344	Sarcophilus harrisii	ENSSHAG00000010344	I	0.000
SMU15015494	Schmidtea mediterranea	SMU15015494	I	0.000
SINV15516	Solenopsis invicta	SINV15516	I	0.000
L596_g15	Steinernema carpocapsae	L596_g15	I	0.000
L596_g26024	Steinernema carpocapsae	L596_g26024	I	0.000
L889_g22387	Steinernema feltiae	L889_g22387	I	0.000
L889_g28104	Steinernema feltiae	L889_g28104	I	0.000
L889_g6780	Steinernema feltiae	L889_g6780	I	0.000
L893_g15056	Steinernema glaseri	L893_g15056	I	0.000
L893_g344	Steinernema glaseri	L893_g344	I	0.000
L893_g8358	Steinernema glaseri	L893_g8358	N	0.000
L898_g17086	Steinernema monticolum	L898_g17086	I	0.000
L898_g26477	Steinernema monticolum	L898_g26477	I	0.000
L892_g19326	Steinernema scapterisci	L892_g19326	N	0.000
L892_g27454	Steinernema scapterisci	L892_g27454	I	0.000
L892_g4495	Steinernema scapterisci	L892_g4495	I	0.000
SMAR013850	Strigamia maritima	SMAR013850	I	0.000
SPU_004287	Strongylocentrotus purpuratus	SPU_004287	I	0.000
SVUK_0000938201	Strongylus vulgaris	SVUK_0000938201	I	0.000
SMAD4	Sus scrofa	ENSSSCG00000004524	I	0.000
si:dkey-222b8.1	Takifugu rubripes	ENSTRUG00000004163	I	0.000
gb:cr929477	Takifugu rubripes	ENSTRUG00000011769	I	0.000
SMAD4	Takifugu rubripes	ENSTRUG00000014045	I	0.000
ENSTSYG00000009792	Tarsius syrichta	ENSTSYG00000009792	I	0.000
TELCIR_19676	Teladorsagia circumcincta	TELCIR_19676	I	0.000
tetur10g00400	Tetranychus urticae	tetur10g00400	I	0.000
gb:cr929477	Tetraodon nigroviridis	ENSTNIG00000003193	I	0.000
si:dkey-222b8.1	Tetraodon nigroviridis	ENSTNIG00000005007	I	0.000
SMAD4	Tetraodon nigroviridis	ENSTNIG00000009050	I	0.000
TCLT_0000412001	Thelazia callipaeda	TCLT_0000412001	I	0.000
TCLT_0000917301	Thelazia callipaeda	TCLT_0000917301	I	0.000
TC010848	Tribolium castaneum	TC010848	I	0.000
D917_09719	Trichinella nativa	D917_09719	I	0.000
EFV62078	Trichinella spiralis	EFV62078	I	0.000
TriadG30731	Trichoplax adhaerens	TriadG30731	I	0.000
TMUE_s0006012700	Trichuris muris	TMUE_s0006012700	I	0.000
TTRE_0000855901	Trichuris trichiura	TTRE_0000855901	I	0.000
SMAD4	Tupaia belangeri	ENSTBEG00000014105	I	0.000
SMAD4	Vicugna pacos	ENSVPAG00000006757	I	0.000
WUBG_02880	Wuchereria bancrofti	WUBG_02880	I	0.000
WUBG_08631	Wuchereria bancrofti	WUBG_08631	I	0.000
AAH84196	Xenopus laevis	AAH84196	I	0.000
smad4.2.S	Xenopus laevis	XB-GENE-5995204	I	0.000
smad4.2.L	Xenopus laevis	XB-GENE-6256010	I	0.000
smad4.1.L	Xenopus laevis	XB-GENE-865543	I	0.000
smad4.1	Xenopus tropicalis	XB-GENE-485691	I	0.000
ENSXMAG00000005051	Xiphophorus maculatus	ENSXMAG00000005051	I	0.000
ENSXMAG00000015245	Xiphophorus maculatus	ENSXMAG00000015245	I	0.000
L798_13939	Zootermopsis nevadensis	L798_13939	I	0.000

HNAJ_0000396301 (Hymenolepis nana) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1922 Related TFs

HNAJ_0000396301 **(Hymenolepis nana)
Homeodomain**