CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC01G08000
(
Oryza punctata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OPUNC01G08000
T276409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.754
0.799
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.754
0.799
Q948S5_TOBAC
M11074_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA2_01
0.749
0.827
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN
NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.730
0.835
MYB3R4
M07125_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R4_col_a
0.702
0.770
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC01G08000.1
Myb
51
97
KGNWTPEEDAILSRAVQTYNGKNWKKIAECFPDRTDVQCLHRWQKVL
OPUNC01G08000.1
Myb
103
149
KGPWSKEEDDIIVQMVNKLGPKKWSTIAQALPGRIGKQCRERWYNHL
OPUNC01G08000.1
Myb
155
199
KEAWTQEEEITLVHAHRMYGNKWAELTKFLPGRTDNSIKNHWNSS
OPUNC01G08000.2
Myb
51
92
KGNWTPEEDAILSRAVQTYNGKNWKKIDRTDVQCLHRWQKVL
OPUNC01G08000.2
Myb
98
144
KGPWSKEEDDIIVQMVNKLGPKKWSTIAQALPGRIGKQCRERWYNHL
OPUNC01G08000.2
Myb
150
194
KEAWTQEEEITLVHAHRMYGNKWAELTKFLPGRTDNSIKNHWNSS
Links
Other
Myb/SANT
family TFs
Other
Oryza punctata
TFs
140 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_05724
Aegilops tauschii
F775_05724
I
0.863
AMTR_s00009p00263240
Amborella trichopoda
AMTR_s00009p00263240
I
0.717
AMTR_s00012p00208260
Amborella trichopoda
AMTR_s00012p00208260
I
0.661
AMTR_s00109p00061950
Amborella trichopoda
AMTR_s00109p00061950
I
0.691
Aquca_001_00435
Aquilegia coerulea
Aquca_001_00435
I
0.753
Aquca_013_00366
Aquilegia coerulea
Aquca_013_00366
I
0.686
fgenesh1_pg.C_scaffold_3000839
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3000839
I
0.666
MYB3R-4
Arabidopsis lyrata
fgenesh2_kg.6__1121__AT5G11510.1
I
0.702
PC-MYB1
Arabidopsis lyrata
fgenesh2_kg.7__866__AT4G32730.2
I
0.754
MYB3R-3
Arabidopsis thaliana
AT3G09370
I
0.666
PC-MYB1
Arabidopsis thaliana
AT4G32730
D
0.754
MYB3R4
Arabidopsis thaliana
AT5G11510
D
0.702
Bostr.20055s0087
Boechera stricta
Bostr.20055s0087
I
0.702
Bostr.6251s0040
Boechera stricta
Bostr.6251s0040
I
0.672
Bostr.7867s1124
Boechera stricta
Bostr.7867s1124
I
0.754
BRADI2G07677
Brachypodium distachyon
BRADI2G07677
N
0.719
BRADI2G31887
Brachypodium distachyon
BRADI2G31887
I
0.771
Bo1g010040
Brassica oleracea
Bo1g010040
I
0.723
Bo3g007070
Brassica oleracea
Bo3g007070
I
0.708
Bo3g171130
Brassica oleracea
Bo3g171130
I
0.748
Bo3g179620
Brassica oleracea
Bo3g179620
I
0.708
Bo7g115810
Brassica oleracea
Bo7g115810
I
0.751
Bo9g171130
Brassica oleracea
Bo9g171130
I
0.702
Bra006102
Brassica rapa
Bra006102
I
0.706
Bra008956
Brassica rapa
Bra008956
I
0.702
Bra011376
Brassica rapa
Bra011376
I
0.723
Bra034531
Brassica rapa
Bra034531
I
0.748
Bra037045
Brassica rapa
Bra037045
I
0.722
PK12011.1
Cannabis sativa
PK12011.1
D
0.730
PK22174.1
Cannabis sativa
PK22174.1
I
0.710
Cagra.4093s0003
Capsella grandiflora
Cagra.4093s0003
I
0.698
Cagra.7526s0003
Capsella grandiflora
Cagra.7526s0003
I
0.686
Carubv10000155m.g
Capsella rubella
Carubv10000155m.g
I
0.686
Carubv10004063m.g
Capsella rubella
Carubv10004063m.g
I
0.698
evm.TU.supercontig_78.76
Carica papaya
evm.TU.supercontig_78.76
I
0.764
Ca_01884
Cicer arietinum
Ca_01884
I
0.702
Ca_14925
Cicer arietinum
Ca_14925
I
0.740
Cla022565
Citrullus lanatus
Cla022565
I
0.750
Cla023357
Citrullus lanatus
Cla023357
I
0.748
Ciclev10007316m.g
Citrus clementina
Ciclev10007316m.g
I
0.759
Ciclev10011452m.g
Citrus clementina
Ciclev10011452m.g
I
0.683
orange1.1g009402m.g
Citrus sinensis
orange1.1g009402m.g
I
0.683
Cucsa.161430
Cucumis sativus
Cucsa.161430
I
0.750
Cucsa.175460
Cucumis sativus
Cucsa.175460
I
0.666
Cucsa.311420
Cucumis sativus
Cucsa.311420
I
0.748
Eucgr.C02893
Eucalyptus grandis
Eucgr.C02893
I
0.750
Thhalv10012583m.g
Eutrema salsugineum
Thhalv10012583m.g
I
0.696
Thhalv10024320m.g
Eutrema salsugineum
Thhalv10024320m.g
I
0.716
gene08793-v1.0-hybrid
Fragaria vesca
gene08793-v1.0-hybrid
I
0.766
gene18416-v1.0-hybrid
Fragaria vesca
gene18416-v1.0-hybrid
I
0.677
GLYMA04G08550
Glycine max
GLYMA04G08550
I
0.743
GLYMA06G08660
Glycine max
GLYMA06G08660
I
0.743
GLYMA14G21523
Glycine max
GLYMA14G21523
I
0.714
GLYMA17G26240
Glycine max
GLYMA17G26240
I
0.721
Gorai.001G028200
Gossypium raimondii
Gorai.001G028200
I
0.712
Gorai.006G172800
Gossypium raimondii
Gorai.006G172800
I
0.678
Gorai.008G117400
Gossypium raimondii
Gorai.008G117400
N
0.666
Gorai.009G051000
Gossypium raimondii
Gorai.009G051000
I
0.728
Gorai.010G110000
Gossypium raimondii
Gorai.010G110000
I
0.728
MLOC_10556
Hordeum vulgare
MLOC_10556
I
0.846
LPERR01G31650
Leersia perrieri
LPERR01G31650
I
0.667
Lus10022136.g
Linum usitatissimum
Lus10022136.g
I
0.786
Lus10024394.g
Linum usitatissimum
Lus10024394.g
I
0.687
Lus10025351.g
Linum usitatissimum
Lus10025351.g
I
0.687
LjT22I05.60.nd
Lotus japonicus
LjT22I05.60.nd
I
0.761
MDP0000179225
Malus domestica
MDP0000179225
I
0.774
MDP0000295807
Malus domestica
MDP0000295807
I
0.781
MTR_1g026870
Medicago truncatula
MTR_1g026870
I
0.735
MTR_3g110028
Medicago truncatula
MTR_3g110028
I
0.741
mgf006384m
Mimulus guttatus
mgf006384m
I
0.677
mgf008601m
Mimulus guttatus
mgf008601m
I
0.747
GSMUA_Achr10G14840_001
Musa acuminata
GSMUA_Achr10G14840_001
I
0.756
GSMUA_Achr2G19890_001
Musa acuminata
GSMUA_Achr2G19890_001
I
0.788
Q948S5_TOBAC
Nicotiana tabacum
Q948S5_TOBAC
D
0.749
OBART01G08110
Oryza barthii
OBART01G08110
I
0.901
OBART05G19200
Oryza barthii
OBART05G19200
I
0.708
OB01G18340
Oryza brachyantha
OB01G18340
I
0.890
OB01G45570
Oryza brachyantha
OB01G45570
I
0.669
OB05G26770
Oryza brachyantha
OB05G26770
N
0.695
OB12G16480
Oryza brachyantha
OB12G16480
I
0.886
ORGLA01G0073200
Oryza glaberrima
ORGLA01G0073200
I
0.870
ORGLA01G0306500
Oryza glaberrima
ORGLA01G0306500
I
0.699
ORGLA05G0166300
Oryza glaberrima
ORGLA05G0166300
I
0.715
ORGLA12G0066300
Oryza glaberrima
ORGLA12G0066300
I
0.886
OGLUM01G09290
Oryza glumaepatula
OGLUM01G09290
I
0.901
OGLUM01G40780
Oryza glumaepatula
OGLUM01G40780
I
0.699
BGIOSGA017917
Oryza indica
BGIOSGA017917
I
0.708
OLONG_011886
Oryza longistaminata
OLONG_011886
I
0.901
OMERI01G08160
Oryza meridionalis
OMERI01G08160
I
0.859
ONIVA01G10670
Oryza nivara
ONIVA01G10670
I
0.901
ONIVA05G20060
Oryza nivara
ONIVA05G20060
I
0.708
OPUNC01G07980
Oryza punctata
OPUNC01G07980
I
0.909
OPUNC05G16800
Oryza punctata
OPUNC05G16800
I
0.701
OPUNC12G06560
Oryza punctata
OPUNC12G06560
N
0.761
ORUFI01G08920
Oryza rufipogon
ORUFI01G08920
N
0.675
ORUFI05G20390
Oryza rufipogon
ORUFI05G20390
I
0.708
MYB3R-2
Oryza sativa
OS01G0841500
I
0.699
OS05G0459000
Oryza sativa
OS05G0459000
I
0.715
OS12G0238000
Oryza sativa
OS12G0238000
I
0.880
Pavir.Ea00087
Panicum virgatum
Pavir.Ea00087
I
0.880
Pavir.Ea03349
Panicum virgatum
Pavir.Ea03349
I
0.697
Pavir.Eb00149
Panicum virgatum
Pavir.Eb00149
I
0.880
Pavir.Eb03676
Panicum virgatum
Pavir.Eb03676
I
0.697
Pavir.J07395
Panicum virgatum
Pavir.J07395
I
0.803
PDK_20s1371143g001
Phoenix dactylifera
PDK_20s1371143g001
I
0.694
e_gw1.120.1.1
Physcomitrella patens
e_gw1.120.1.1
I
0.679
e_gw1.36.4.1
Physcomitrella patens
e_gw1.36.4.1
I
0.685
POPTR_0006s08570
Populus trichocarpa
POPTR_0006s08570
I
0.691
POPTR_0006s25840
Populus trichocarpa
POPTR_0006s25840
I
0.748
POPTR_0018s00710
Populus trichocarpa
POPTR_0018s00710
I
0.748
Pm005124
Prunus mume
Pm005124
I
0.764
Pm018007
Prunus mume
Pm018007
I
0.683
PRUPE_ppa000676mg
Prunus persica
PRUPE_ppa000676mg
I
0.784
PRUPE_ppa022218mg
Prunus persica
PRUPE_ppa022218mg
I
0.683
29794.m003447
Ricinus communis
29794.m003447
I
0.744
SapurV1A.0001s1810
Salix purpurea
SapurV1A.0001s1810
I
0.689
SapurV1A.0283s0180
Salix purpurea
SapurV1A.0283s0180
I
0.750
SapurV1A.0446s0220
Salix purpurea
SapurV1A.0446s0220
I
0.718
Si000842m.g
Setaria italica
Si000842m.g
I
0.697
Si021484m.g
Setaria italica
Si021484m.g
I
0.704
Solyc08g068320.2
Solanum lycopersicum
Solyc08g068320.2
I
0.750
Solyc11g071300.1
Solanum lycopersicum
Solyc11g071300.1
I
0.667
Sb03g039470
Sorghum bicolor
Sb03g039470
I
0.671
Sb09g007370
Sorghum bicolor
Sb09g007370
N
0.735
TCM_047091
Theobroma cacao
TCM_047091
I
0.731
Traes_1AS_61D017632
Triticum aestivum
Traes_1AS_61D017632
I
0.779
Traes_1BL_C25B5DDB4
Triticum aestivum
Traes_1BL_C25B5DDB4
I
0.685
Traes_1BS_403DBC53C
Triticum aestivum
Traes_1BS_403DBC53C
I
0.776
Traes_1DL_B26A733D4
Triticum aestivum
Traes_1DL_B26A733D4
I
0.682
Traes_3AL_386795528
Triticum aestivum
Traes_3AL_386795528
I
0.667
Traes_3AS_09025DA2E
Triticum aestivum
Traes_3AS_09025DA2E
I
0.893
TRAES3BF049800070CFD_g
Triticum aestivum
TRAES3BF049800070CFD_g
I
0.893
TRAES3BF104600030CFD_g
Triticum aestivum
TRAES3BF104600030CFD_g
I
0.667
Traes_3DL_6BBC889A1
Triticum aestivum
Traes_3DL_6BBC889A1
I
0.667
TRIUR3_24658
Triticum urartu
TRIUR3_24658
I
0.864
TRIUR3_29290
Triticum urartu
TRIUR3_29290
I
0.691
VIT_04s0008g03780
Vitis vinifera
VIT_04s0008g03780
I
0.709
VIT_08s0007g00360
Vitis vinifera
VIT_08s0007g00360
I
0.663
VIT_11s0016g03750
Vitis vinifera
VIT_11s0016g03750
I
0.742