Bo4g111040 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo4g111040 T000814_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.799 0.940
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.740 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g111040.1 AP2 26 77

Links

Other AP2 family TFs
Other Brassica oleracea TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra014617 Brassica rapa Bra014617 I 0.820
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.812
Bo6g073020 Brassica oleracea Bo6g073020 I 0.804
Bo8g092010 Brassica oleracea Bo8g092010 I 0.801
Bra007341 Brassica rapa Bra007341 I 0.801
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.799
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.799
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.799
DREB2F Arabidopsis thaliana AT3G57600 D 0.799
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.799
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.755
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.755
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.755
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.755
TCM_024756 Theobroma cacao TCM_024756 I 0.753
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.753
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.753
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.752
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.752
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.752
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.751
Ca_07264 Cicer arietinum Ca_07264 I 0.750
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.750
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.750
27810.m000639 Ricinus communis 27810.m000639 I 0.750
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.750
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.750
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.750
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.750
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.750
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.750
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.750
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.750
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.749
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.747
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.746
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.746
OBART03G05550 Oryza barthii OBART03G05550 I 0.746
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.746
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.746
MDP0000703626 Malus domestica MDP0000703626 I 0.746
MDP0000871361 Malus domestica MDP0000871361 I 0.746
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.746
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.746
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.746
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.746
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.746
DREB2E Oryza sativa OS03G0174400 I 0.746
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.746
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.746
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.746
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.746
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.746
Pm025865 Prunus mume Pm025865 I 0.746
Cla017778 Citrullus lanatus Cla017778 I 0.744
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.742
PK08602.1 Cannabis sativa PK08602.1 D 0.740
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.740
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.739
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.738
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.737
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.737
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.736
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.736
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.735
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.708
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.706
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I 0.694
Gorai.011G291900 Gossypium raimondii Gorai.011G291900 I 0.685
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.685
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I 0.682
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.678
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.678