zeb1b (Gasterosteus aculeatus)
C2H2 ZF,Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox) 		IPR007087
IPR001356 		ENSGACG00000001002 T075855_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZEB1
M08080_2.00 		Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN		 ChIP-seq
Mathelier et al.(2014)
MA0103.3 		0.870 0.870
ZEB1
M07842_2.00 		Homo sapiens
YNCACCTG
CAGGTGNR		 ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha 		0.870 0.870
ZEB1
M08190_2.00 		Homo sapiens
CVCWCACCTG
CAGGTGWGBG		 ChIP-seq
Contrino et al.(2012)
Mv136 		0.870 0.870
ZEB1
M08848_2.00 		Homo sapiens
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A 		0.870 0.870
ZEB1
M10089_2.00 		Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN		 Transfac
Matys et al.(2006)
V$AREB6_01 		0.870 0.870
ZEB1
M10090_2.00 		Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW		 Transfac
Matys et al.(2006)
V$AREB6_02 		0.870 0.870
ZEB1
M10091_2.00 		Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB		 Transfac
Matys et al.(2006)
V$AREB6_03 		0.870 0.870
ZEB1
M10092_2.00 		Homo sapiens
NNSAAACVB
VBGTTTSNN		 Transfac
Matys et al.(2006)
V$AREB6_04 		0.870 0.870
ZEB1
M10093_2.00 		Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN		 Transfac
Matys et al.(2006)
V$DELTAEF1_01 		0.870 0.870
ZEB1
M10094_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB1_03 		0.870 0.870
ZEB1
M10095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZEB_Q3 		0.870 0.870
Zeb1
M05844_2.00 		Mus musculus
NYACCTGN
NCAGGTRN		 SMiLE-seq
Isakova et al.(2017)
ZEB1 		0.865 0.865
Zeb1
M08849_2.00 		Mus musculus
YHYACCTGBV
BVCAGGTRDR		 Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B 		0.865 0.865
ZEB2
M10096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIP1_Q6 		0.805 0.805
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000001301 C2H2 ZF 116 139
ENSGACP00000001301 C2H2 ZF 146 168
ENSGACP00000001301 C2H2 ZF 186 208
ENSGACP00000001301 C2H2 ZF 214 235
ENSGACP00000001301 Homeodomain 529 573
ENSGACP00000001301 C2H2 ZF 818 840
ENSGACP00000001301 C2H2 ZF 846 868
ENSGACP00000001301 C2H2 ZF 874 891

Links

Other C2H2 ZF,Homeodomain family TFs
Other Gasterosteus aculeatus TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSONIG00000003766 Oreochromis niloticus ENSONIG00000003766 I 0.951
zeb1b Oryzias latipes ENSORLG00000004296 I 0.932
ENSPFOG00000013823 Poecilia formosa ENSPFOG00000013823 I 0.918
ENSXMAG00000005475 Xiphophorus maculatus ENSXMAG00000005475 I 0.917
zeb1b Danio rerio ENSDARG00000013207 I 0.874
Myotis_brandtii_ZEB1_10033015 Myotis brandtii Myotis_brandtii_ZEB1_10033015 I 0.870
ZEB1 Sorex araneus ENSSARG00000010985 I 0.870
Zeb1 Mus musculus ENSMUSG00000024238 D 0.865
ENSLOCG00000007239 Lepisosteus oculatus ENSLOCG00000007239 I 0.865
zeb1b Takifugu rubripes ENSTRUG00000001422 I 0.865
zeb1.S Xenopus laevis XB-GENE-865109 I 0.845
ZEB1 Anolis carolinensis ENSACAG00000007353 I 0.837
ZEB1 Gorilla gorilla ENSGGOG00000010090 I 0.837
ENSNLEG00000018130 Nomascus leucogenys ENSNLEG00000018130 I 0.837
ZEB1 Macaca mulatta ENSMMUG00000015453 I 0.837
ZEB1 Otolemur garnettii ENSOGAG00000008365 I 0.837
ENSPPYG00000002189 Pongo abelii ENSPPYG00000002189 I 0.837
ENSSTOG00000016404 Ictidomys tridecemlineatus ENSSTOG00000016404 I 0.837
ENSP00000319248 Macaca fascicularis ENSP00000319248 I 0.837
Alligator_sinensis_CCG010397.1 Alligator sinensis Alligator_sinensis_CCG010397.1 I 0.837
Cmyd_10008652 Chelonia mydas Cmyd_10008652 I 0.837
Zeb1 Rattus norvegicus ENSRNOG00000017863 I 0.837
ZEB1 Pteropus vampyrus ENSPVAG00000010088 I 0.837
ZEB1 Homo sapiens ENSG00000148516 D 0.837
ENSPSIG00000009469 Pelodiscus sinensis ENSPSIG00000009469 I 0.837
ZEB1 Pan troglodytes ENSPTRG00000002404 I 0.837
ENSPANG00000022899 Papio anubis ENSPANG00000022899 I 0.837
ENSMPUG00000013033 Mustela putorius furo ENSMPUG00000013033 I 0.837
ENSCSAG00000011628 Chlorocebus sabaeus ENSCSAG00000011628 I 0.837
ZEB1 Dasypus novemcinctus ENSDNOG00000016748 I 0.837
ZEB1 Canis familiaris ENSCAFG00000004023 I 0.837
ZEB1 Bos taurus ENSBTAG00000020053 I 0.837
ENSAMEG00000010224 Ailuropoda melanoleuca ENSAMEG00000010224 I 0.837
Zeb1 Dipodomys ordii ENSDORG00000007230 I 0.837
ZEB1 Callithrix jacchus ENSCJAG00000013332 I 0.837
ZEB1 Felis catus ENSFCAG00000010440 I 0.837
ZEB1 Loxodonta africana ENSLAFG00000009663 I 0.836
ABC48601 Xenopus laevis ABC48601 I 0.835
ENSSHAG00000005352 Sarcophilus harrisii ENSSHAG00000005352 I 0.833
ZEB1 Monodelphis domestica ENSMODG00000007847 I 0.833
ENSAPLG00000007482 Anas platyrhynchos ENSAPLG00000007482 I 0.832
ZEB1 Gallus gallus ENSGALG00000007260 I 0.832
Aan_R013683 Calypte anna Aan_R013683 I 0.832
Afo_R009258 Aptenodytes forsteri Afo_R009258 I 0.832
Gfo_R014876 Geospiza fortis Gfo_R014876 I 0.832
Tal_R009077 Tyto alba Tal_R009077 I 0.832
ENSLACG00000013253 Latimeria chalumnae ENSLACG00000013253 I 0.832
ENSFALG00000007118 Ficedula albicollis ENSFALG00000007118 I 0.832
ZEB1 Meleagris gallopavo ENSMGAG00000006355 I 0.831
zeb1 Xenopus tropicalis XB-GENE-484655 I 0.830
ZEB1 Taeniopygia guttata ENSTGUG00000001020 I 0.822
ENSSHAG00000016692 Sarcophilus harrisii ENSSHAG00000016692 I 0.805
ENSSTOG00000003811 Ictidomys tridecemlineatus ENSSTOG00000003811 I 0.805
ZEB2 Myotis lucifugus ENSMLUG00000002019 I 0.805
ENSAPLG00000007687 Anas platyrhynchos ENSAPLG00000007687 I 0.805
ZEB2 Bos taurus ENSBTAG00000012615 I 0.805
ZEB2 Homo sapiens ENSG00000169554 D 0.805
zeb2 Xenopus tropicalis XB-GENE-479558 I 0.805
ZEB2 Macaca mulatta ENSMMUG00000016845 I 0.805
Zeb2 Rattus norvegicus ENSRNOG00000004677 I 0.805
XP_002936763 Xenopus tropicalis XP_002936763 I 0.805
ZEB2 Loxodonta africana ENSLAFG00000008960 I 0.805
ENSAMEG00000009337 Ailuropoda melanoleuca ENSAMEG00000009337 I 0.805
Alligator_sinensis_CCG017701.1 Alligator sinensis Alligator_sinensis_CCG017701.1 I 0.805
ENSBTAP00000053646-D1 Bos grunniens ENSBTAP00000053646-D1 I 0.805
ENSP00000386854 Macaca fascicularis ENSP00000386854 I 0.805
XP_002936766 Xenopus tropicalis XP_002936766 I 0.805
ZEB2 Meleagris gallopavo ENSMGAG00000012628 I 0.805
ZEB2 Canis familiaris ENSCAFG00000005497 I 0.805
ZEB2 Tursiops truncatus ENSTTRG00000006478 I 0.805
ZEB2 Vicugna pacos ENSVPAG00000002128 I 0.805
Myotis_brandtii_ZEB2_10007070 Myotis brandtii Myotis_brandtii_ZEB2_10007070 I 0.805
ZEB2 Pan troglodytes ENSPTRG00000012513 I 0.805
Zeb2 Mus musculus ENSMUSG00000026872 I 0.805
ZEB2 Ochotona princeps ENSOPRG00000006205 I 0.805
ZEB2 Gorilla gorilla ENSGGOG00000003186 I 0.805
ENSCSAG00000016197 Chlorocebus sabaeus ENSCSAG00000016197 I 0.805
ZEB2 Otolemur garnettii ENSOGAG00000010020 I 0.805
ZEB2 Dasypus novemcinctus ENSDNOG00000039558 I 0.805
ZEB2 Oryctolagus cuniculus ENSOCUG00000027880 I 0.805
ENSGALG00000012440 Gallus gallus ENSGALG00000012440 I 0.805
ENSNLEG00000009020 Nomascus leucogenys ENSNLEG00000009020 I 0.805
ENSPANG00000008399 Papio anubis ENSPANG00000008399 I 0.805
ENSPPYG00000012831 Pongo abelii ENSPPYG00000012831 I 0.805
ZEB2 Monodelphis domestica ENSMODG00000003112 I 0.805
ZEB2 Choloepus hoffmanni ENSCHOG00000001435 I 0.805
ZEB2 Callithrix jacchus ENSCJAG00000012457 I 0.805
ZEB2 Equus caballus ENSECAG00000019355 I 0.805
ZEB2 Felis catus ENSFCAG00000015532 I 0.805
ENSMPUG00000003620 Mustela putorius furo ENSMPUG00000003620 I 0.805
ZEB2 Cavia porcellus ENSCPOG00000004182 I 0.805
zeb1a Tetraodon nigroviridis ENSTNIG00000007962 I 0.783
ZEB1 Myotis lucifugus ENSMLUG00000010631 I 0.775
ENSPFOG00000014121 Poecilia formosa ENSPFOG00000014121 I 0.775
ENSPFOG00000014086 Poecilia formosa ENSPFOG00000014086 I 0.775
ENSXMAG00000006005 Xiphophorus maculatus ENSXMAG00000006005 I 0.775
ZEB1 Cavia porcellus ENSCPOG00000007682 I 0.775
Ogr14261 Ophisaurus gracilis Ogr14261 I 0.771
Pvit_13221 Pogona vitticeps Pvit_13221 I 0.771
ZEB2 Anolis carolinensis ENSACAG00000023811 I 0.771
Cmyd_10013008 Chelonia mydas Cmyd_10013008 I 0.770
ENSONIG00000015066 Oreochromis niloticus ENSONIG00000015066 I 0.770
ENSPSIG00000016788 Pelodiscus sinensis ENSPSIG00000016788 I 0.770
zeb2.S Xenopus laevis XB-GENE-865280 I 0.767
Afo_R000542 Aptenodytes forsteri Afo_R000542 I 0.762
ENSFALG00000013846 Ficedula albicollis ENSFALG00000013846 I 0.762
ZEB2 Taeniopygia guttata ENSTGUG00000011904 I 0.762
Brh_R003547 Buceros rhinoceros Brh_R003547 I 0.762
Aan_R003058 Calypte anna Aan_R003058 I 0.762
Gfo_R001123 Geospiza fortis Gfo_R001123 I 0.762
zeb1a Gasterosteus aculeatus ENSGACG00000017648 I 0.761
ENSGMOG00000010266 Gadus morhua ENSGMOG00000010266 I 0.760
ENSAMXG00000010069 Astyanax mexicanus ENSAMXG00000010069 I 0.743
ENSXMAG00000002123 Xiphophorus maculatus ENSXMAG00000002123 I 0.732
ENSPFOG00000016296 Poecilia formosa ENSPFOG00000016296 I 0.721
ZEB1 Takifugu rubripes ENSTRUG00000001256 N 0.720
ENSAMXG00000012742 Astyanax mexicanus ENSAMXG00000012742 N 0.710
ZEB2 Pteropus vampyrus ENSPVAG00000015557 I 0.710
zeb1a Danio rerio ENSDARG00000016788 I 0.710