CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zeb1b
(
Danio rerio
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSDARG00000013207
T075814_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.913
0.913
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG
CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.913
0.913
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG
CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.913
0.913
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.913
0.913
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.913
0.913
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.913
0.913
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.913
0.913
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB
VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.913
0.913
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.913
0.913
ZEB1
M10094_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.913
0.913
ZEB1
M10095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.913
0.913
Zeb1
M05844_2.00
Mus musculus
NYACCTGN
NCAGGTRN
SMiLE-seq
Isakova et al.(2017)
ZEB1
0.908
0.908
Zeb1
M08849_2.00
Mus musculus
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_MOUSE.H11MO.0.B
0.908
0.908
ZEB2
M10096_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SIP1_Q6
0.835
0.835
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000047723
C2H2 ZF
137
160
LTCPYCSRGYKRYTSLKEHIKYRH
ENSDARP00000047723
C2H2 ZF
167
189
FSCSLCSYTFAYRTQLDRHMTAH
ENSDARP00000047723
C2H2 ZF
209
231
FKCTECGKAFKYKHHLKEHLRIH
ENSDARP00000047723
C2H2 ZF
237
258
YECSNCKKRFSHSGSYSSHISS
ENSDARP00000047723
Homeodomain
531
577
QPPLKNLLSLLKAYFALNNEPTKEELAKISESVSLPAEVVKKWFEKM
ENSDARP00000047723
C2H2 ZF
831
853
YACDLCDKIFQKSSSLLRHKYEH
ENSDARP00000047723
C2H2 ZF
859
881
HECGICSKAFKHKHHLIEHLRLH
ENSDARP00000047723
C2H2 ZF
887
908
YQCDKCGKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Danio rerio
TFs
123 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSLOCG00000007239
Lepisosteus oculatus
ENSLOCG00000007239
I
0.932
ENSONIG00000003766
Oreochromis niloticus
ENSONIG00000003766
I
0.916
ZEB1
Monodelphis domestica
ENSMODG00000007847
I
0.913
Myotis_brandtii_ZEB1_10033015
Myotis brandtii
Myotis_brandtii_ZEB1_10033015
I
0.913
zeb1b
Oryzias latipes
ENSORLG00000004296
I
0.913
ZEB1
Sorex araneus
ENSSARG00000010985
I
0.913
ENSAPLG00000007482
Anas platyrhynchos
ENSAPLG00000007482
I
0.909
Tal_R009077
Tyto alba
Tal_R009077
I
0.909
Aan_R013683
Calypte anna
Aan_R013683
I
0.909
Gfo_R014876
Geospiza fortis
Gfo_R014876
I
0.909
Afo_R009258
Aptenodytes forsteri
Afo_R009258
I
0.909
ENSFALG00000007118
Ficedula albicollis
ENSFALG00000007118
I
0.909
ZEB1
Gallus gallus
ENSGALG00000007260
I
0.909
ABC48601
Xenopus laevis
ABC48601
I
0.908
Zeb1
Mus musculus
ENSMUSG00000024238
D
0.908
ZEB1
Meleagris gallopavo
ENSMGAG00000006355
I
0.908
Alligator_sinensis_CCG010397.1
Alligator sinensis
Alligator_sinensis_CCG010397.1
I
0.904
ZEB1
Pteropus vampyrus
ENSPVAG00000010088
I
0.904
ZEB1
Gorilla gorilla
ENSGGOG00000010090
I
0.904
Zeb1
Rattus norvegicus
ENSRNOG00000017863
I
0.904
ENSPANG00000022899
Papio anubis
ENSPANG00000022899
I
0.904
ENSLACG00000013253
Latimeria chalumnae
ENSLACG00000013253
I
0.904
ENSPSIG00000009469
Pelodiscus sinensis
ENSPSIG00000009469
I
0.904
ENSAMEG00000010224
Ailuropoda melanoleuca
ENSAMEG00000010224
I
0.904
ENSPPYG00000002189
Pongo abelii
ENSPPYG00000002189
I
0.904
ENSMPUG00000013033
Mustela putorius furo
ENSMPUG00000013033
I
0.904
ZEB1
Bos taurus
ENSBTAG00000020053
I
0.904
ENSNLEG00000018130
Nomascus leucogenys
ENSNLEG00000018130
I
0.904
ZEB1
Canis familiaris
ENSCAFG00000004023
I
0.904
ZEB1
Macaca mulatta
ENSMMUG00000015453
I
0.904
ZEB1
Pan troglodytes
ENSPTRG00000002404
I
0.904
Cmyd_10008652
Chelonia mydas
Cmyd_10008652
I
0.904
ENSCSAG00000011628
Chlorocebus sabaeus
ENSCSAG00000011628
I
0.904
ZEB1
Taeniopygia guttata
ENSTGUG00000001020
I
0.904
ZEB1
Dasypus novemcinctus
ENSDNOG00000016748
I
0.904
Zeb1
Dipodomys ordii
ENSDORG00000007230
I
0.904
ENSSTOG00000016404
Ictidomys tridecemlineatus
ENSSTOG00000016404
I
0.904
ZEB1
Felis catus
ENSFCAG00000010440
I
0.904
ZEB1
Otolemur garnettii
ENSOGAG00000008365
I
0.904
ZEB1
Callithrix jacchus
ENSCJAG00000013332
I
0.904
ENSP00000319248
Macaca fascicularis
ENSP00000319248
I
0.904
ZEB1
Homo sapiens
ENSG00000148516
D
0.904
zeb1
Xenopus tropicalis
XB-GENE-484655
I
0.903
ZEB1
Loxodonta africana
ENSLAFG00000009663
I
0.903
ENSSHAG00000005352
Sarcophilus harrisii
ENSSHAG00000005352
I
0.900
ZEB1
Anolis carolinensis
ENSACAG00000007353
I
0.899
zeb1.S
Xenopus laevis
XB-GENE-865109
I
0.893
ENSPFOG00000013823
Poecilia formosa
ENSPFOG00000013823
I
0.880
ENSXMAG00000005475
Xiphophorus maculatus
ENSXMAG00000005475
I
0.879
zeb1b
Gasterosteus aculeatus
ENSGACG00000001002
I
0.874
zeb1a
Tetraodon nigroviridis
ENSTNIG00000007962
I
0.842
ENSPANG00000008399
Papio anubis
ENSPANG00000008399
I
0.835
Alligator_sinensis_CCG017701.1
Alligator sinensis
Alligator_sinensis_CCG017701.1
I
0.835
ENSP00000386854
Macaca fascicularis
ENSP00000386854
I
0.835
ENSBTAP00000053646-D1
Bos grunniens
ENSBTAP00000053646-D1
I
0.835
ENSSHAG00000016692
Sarcophilus harrisii
ENSSHAG00000016692
I
0.835
ENSSTOG00000003811
Ictidomys tridecemlineatus
ENSSTOG00000003811
I
0.835
ZEB2
Vicugna pacos
ENSVPAG00000002128
I
0.835
Zeb2
Rattus norvegicus
ENSRNOG00000004677
I
0.835
ENSPPYG00000012831
Pongo abelii
ENSPPYG00000012831
I
0.835
ZEB2
Pan troglodytes
ENSPTRG00000012513
I
0.835
ZEB2
Tursiops truncatus
ENSTTRG00000006478
I
0.835
ZEB2
Monodelphis domestica
ENSMODG00000003112
I
0.835
ZEB2
Dasypus novemcinctus
ENSDNOG00000039558
I
0.835
ENSCSAG00000016197
Chlorocebus sabaeus
ENSCSAG00000016197
I
0.835
ZEB2
Cavia porcellus
ENSCPOG00000004182
I
0.835
ZEB2
Equus caballus
ENSECAG00000019355
I
0.835
zeb2
Xenopus tropicalis
XB-GENE-479558
I
0.835
ZEB2
Homo sapiens
ENSG00000169554
D
0.835
ZEB2
Felis catus
ENSFCAG00000015532
I
0.835
ZEB2
Callithrix jacchus
ENSCJAG00000012457
I
0.835
ZEB2
Choloepus hoffmanni
ENSCHOG00000001435
I
0.835
XP_002936766
Xenopus tropicalis
XP_002936766
I
0.835
ENSAMEG00000009337
Ailuropoda melanoleuca
ENSAMEG00000009337
I
0.835
ZEB2
Anolis carolinensis
ENSACAG00000023811
I
0.835
XP_002936763
Xenopus tropicalis
XP_002936763
I
0.835
ENSAPLG00000007687
Anas platyrhynchos
ENSAPLG00000007687
I
0.835
ZEB2
Canis familiaris
ENSCAFG00000005497
I
0.835
ZEB2
Bos taurus
ENSBTAG00000012615
I
0.835
ZEB2
Ochotona princeps
ENSOPRG00000006205
I
0.835
ENSGALG00000012440
Gallus gallus
ENSGALG00000012440
I
0.835
Zeb2
Mus musculus
ENSMUSG00000026872
I
0.835
ZEB2
Gorilla gorilla
ENSGGOG00000003186
I
0.835
ENSNLEG00000009020
Nomascus leucogenys
ENSNLEG00000009020
I
0.835
Myotis_brandtii_ZEB2_10007070
Myotis brandtii
Myotis_brandtii_ZEB2_10007070
I
0.835
ZEB2
Otolemur garnettii
ENSOGAG00000010020
I
0.835
ZEB2
Oryctolagus cuniculus
ENSOCUG00000027880
I
0.835
ZEB2
Macaca mulatta
ENSMMUG00000016845
I
0.835
ENSMPUG00000003620
Mustela putorius furo
ENSMPUG00000003620
I
0.835
ZEB2
Meleagris gallopavo
ENSMGAG00000012628
I
0.835
ZEB2
Loxodonta africana
ENSLAFG00000008960
I
0.835
Pvit_13221
Pogona vitticeps
Pvit_13221
I
0.835
Ogr14261
Ophisaurus gracilis
Ogr14261
I
0.835
ZEB2
Myotis lucifugus
ENSMLUG00000002019
I
0.835
ENSXMAG00000006005
Xiphophorus maculatus
ENSXMAG00000006005
I
0.833
ENSPFOG00000014121
Poecilia formosa
ENSPFOG00000014121
I
0.833
ENSPFOG00000014086
Poecilia formosa
ENSPFOG00000014086
I
0.833
ENSPSIG00000016788
Pelodiscus sinensis
ENSPSIG00000016788
I
0.830
ENSONIG00000015066
Oreochromis niloticus
ENSONIG00000015066
I
0.828
zeb1b
Takifugu rubripes
ENSTRUG00000001422
I
0.825
ENSAMXG00000010069
Astyanax mexicanus
ENSAMXG00000010069
I
0.825
Cmyd_10013008
Chelonia mydas
Cmyd_10013008
I
0.818
ENSFALG00000013846
Ficedula albicollis
ENSFALG00000013846
I
0.814
Gfo_R001123
Geospiza fortis
Gfo_R001123
I
0.814
Afo_R000542
Aptenodytes forsteri
Afo_R000542
I
0.814
zeb2.S
Xenopus laevis
XB-GENE-865280
I
0.814
ZEB2
Taeniopygia guttata
ENSTGUG00000011904
I
0.814
Brh_R003547
Buceros rhinoceros
Brh_R003547
I
0.814
Aan_R003058
Calypte anna
Aan_R003058
I
0.814
ENSGMOG00000010266
Gadus morhua
ENSGMOG00000010266
I
0.811
zeb1a
Gasterosteus aculeatus
ENSGACG00000017648
I
0.810
ZEB1
Myotis lucifugus
ENSMLUG00000010631
I
0.791
ZEB1
Cavia porcellus
ENSCPOG00000007682
I
0.791
ENSPFOG00000016296
Poecilia formosa
ENSPFOG00000016296
I
0.791
zeb1a
Danio rerio
ENSDARG00000016788
I
0.783
ENSXMAG00000002123
Xiphophorus maculatus
ENSXMAG00000002123
I
0.770
ENSAMXG00000012742
Astyanax mexicanus
ENSAMXG00000012742
N
0.752
ZEB2
Pteropus vampyrus
ENSPVAG00000015557
I
0.750
ZEB1
Takifugu rubripes
ENSTRUG00000001256
N
0.728
ZEB1
Equus caballus
ENSECAG00000020102
I
0.709
ZEB1
Procavia capensis
ENSPCAG00000004425
I
0.709
ENSOARG00000013971
Ovis aries
ENSOARG00000013971
I
0.704
ZEB1
Tursiops truncatus
ENSTTRG00000011798
I
0.704