CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLI1
(
Anolis carolinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSACAG00000006541
T085946_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLI3
M04416_2.00
Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX
0.824
0.957
GLI3
M02642_2.00
Homo sapiens
GACCACCCANK
MNTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI3
0.824
0.957
GLI3
M08875_2.00
Homo sapiens
VRACCACCCAV
BTGGGTGGTYB
Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B
0.824
0.957
GLI3
M10167_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_01
0.824
0.957
GLI3
M10168_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI3_Q5_01
0.824
0.957
GLI3
M04417_2.00
Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG
SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX
0.824
0.957
Gli2
M01024_2.00
Mus musculus
NGACCACCYN
NRGGTGGTCN
PBM
Peterson et al.(2012)
Gli2
0.805
0.922
GLI2
M02875_2.00
Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC
SELEX
Jolma et al.(2013)
GLI2_1
0.805
0.922
GLI2
M02876_2.00
Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC
SELEX
Jolma et al.(2013)
GLI2_2
0.805
0.922
GLI2
M02732_2.00
Homo sapiens
GACCACMCAN
NTGKGTGGTC
SELEX
Jolma et al.(2010)
GLI2_monomer
0.805
0.922
GLI2
M04402_2.00
Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB
SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX
0.805
0.922
GLI2
M02641_2.00
Homo sapiens
GACCACCCAHG
CDTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI2
0.805
0.922
GLI2
M10114_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q3
0.805
0.922
GLI2
M10115_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI2_Q6
0.805
0.922
GLI2
M04403_2.00
Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY
SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX
0.805
0.922
Gli1
M01023_2.00
Mus musculus
NGACCACCHN
NDGGTGGTCN
PBM
Peterson et al.(2012)
Gli1
0.799
0.904
GLI1
M02643_2.00
Homo sapiens
GACCACCCAMG
CKTGGGTGGTC
SELEX
Hallikas et al.(2006)
GLI1
0.799
0.904
Gli1
M08976_2.00
Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY
Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C
0.799
0.904
GLI1
M10176_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q2
0.799
0.904
GLI1
M10177_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3_01
0.799
0.904
GLI1
M10178_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI1_Q3
0.799
0.904
GLI1
M10179_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GLI_Q6
0.799
0.904
Gli3
M01022_2.00
Mus musculus
NGACCACCCNN
NNGGGTGGTCN
PBM
Peterson et al.(2012)
Gli3
0.778
0.948
Gli3
M08023_2.00
Mus musculus
RGVCCACCCAS
STGGGTGGBCY
ChIP-seq
Chen et al.(2011)
GSE11062_Gli3
0.778
0.948
Gli3
M09512_2.00
Mus musculus
RGACCACCCASR
YSTGGGTGGTCY
Misc
Heinz et al.(2010)
Limb-GLI3_GSE11077
0.778
0.948
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000006421
C2H2 ZF
250
275
TNCHWEGCSKEFDTQEQLVHHINNEH
ENSACAP00000006421
C2H2 ZF
283
310
FVCHWRDCSREQRPFKAQYMLVVHMRRH
ENSACAP00000006421
C2H2 ZF
316
340
HKCTFEGCNKAYSRLENLKTHLRSH
ENSACAP00000006421
C2H2 ZF
346
371
YVCEHEGCNKAFSNASDRAKHQNRTH
ENSACAP00000006421
C2H2 ZF
377
402
YVCKIPGCTKRYTDPSSLRKHVKTVH
Links
Other
C2H2 ZF
family TFs
Other
Anolis carolinensis
TFs
191 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pvit_05813
Pogona vitticeps
Pvit_05813
I
0.827
ENSLOCG00000005938
Lepisosteus oculatus
ENSLOCG00000005938
I
0.825
ENSLACG00000017364
Latimeria chalumnae
ENSLACG00000017364
I
0.825
ENSAMXG00000017236
Astyanax mexicanus
ENSAMXG00000017236
I
0.825
GLI3
Equus caballus
ENSECAG00000009281
I
0.824
GLI3
Pan troglodytes
ENSPTRG00000019117
I
0.824
Aan_R014715
Calypte anna
Aan_R014715
I
0.824
GLI3
Myotis lucifugus
ENSMLUG00000015711
I
0.824
Afo_R007816
Aptenodytes forsteri
Afo_R007816
I
0.824
GLI3
Dasypus novemcinctus
ENSDNOG00000049286
I
0.824
GLI3
Monodelphis domestica
ENSMODG00000002714
I
0.824
ENSPSIG00000017804
Pelodiscus sinensis
ENSPSIG00000017804
I
0.824
Cmyd_10007839
Chelonia mydas
Cmyd_10007839
I
0.824
GLI3
Macaca mulatta
ENSMMUG00000013614
I
0.824
ENSFALG00000005113
Ficedula albicollis
ENSFALG00000005113
I
0.824
Brh_R008256
Buceros rhinoceros
Brh_R008256
I
0.824
GLI3
Meleagris gallopavo
ENSMGAG00000012277
I
0.824
ENSSHAG00000009727
Sarcophilus harrisii
ENSSHAG00000009727
I
0.824
ENSMEUG00000013134
Macropus eugenii
ENSMEUG00000013134
I
0.824
ENSGALG00000012329
Gallus gallus
ENSGALG00000012329
I
0.824
GLI3
Loxodonta africana
ENSLAFG00000008944
I
0.824
GLI3
Gorilla gorilla
ENSGGOG00000002026
I
0.824
ENSTSYG00000009406
Tarsius syrichta
ENSTSYG00000009406
I
0.824
GLI3
Homo sapiens
ENSG00000106571
D
0.824
ENSMPUG00000018143
Mustela putorius furo
ENSMPUG00000018143
I
0.824
GLI3
Felis catus
ENSFCAG00000011989
I
0.824
GLI3
Otolemur garnettii
ENSOGAG00000012651
I
0.824
GLI3
Tursiops truncatus
ENSTTRG00000003628
I
0.824
GLI3
Pteropus vampyrus
ENSPVAG00000015920
I
0.824
ENSP00000379258
Macaca fascicularis
ENSP00000379258
I
0.824
gli3.L
Xenopus laevis
XB-GENE-865509
I
0.824
GLI3
Ochotona princeps
ENSOPRG00000011225
I
0.824
GLI3
Bos taurus
ENSBTAG00000010671
I
0.824
ENSPANG00000014545
Papio anubis
ENSPANG00000014545
I
0.824
GLI3
Tupaia belangeri
ENSTBEG00000006673
I
0.824
ENSAPLG00000004361
Anas platyrhynchos
ENSAPLG00000004361
I
0.824
ENSOARG00000017420
Ovis aries
ENSOARG00000017420
I
0.824
XP_002933450
Xenopus tropicalis
XP_002933450
I
0.824
GLI3
Anolis carolinensis
ENSACAG00000017547
I
0.824
ENSAMEG00000008405
Ailuropoda melanoleuca
ENSAMEG00000008405
I
0.824
XP_002933449
Xenopus tropicalis
XP_002933449
I
0.824
GLI3
Oryctolagus cuniculus
ENSOCUG00000006563
I
0.824
Pvit_19093
Pogona vitticeps
Pvit_19093
I
0.824
GLI3
Canis familiaris
ENSCAFG00000003535
I
0.824
GLI3
Procavia capensis
ENSPCAG00000015092
I
0.824
ENSPPYG00000017613
Pongo abelii
ENSPPYG00000017613
I
0.824
GLI3
Choloepus hoffmanni
ENSCHOG00000003774
I
0.824
GLI3
Callithrix jacchus
ENSCJAG00000007690
I
0.824
ENSNLEG00000003160
Nomascus leucogenys
ENSNLEG00000003160
I
0.824
GLI3
Ornithorhynchus anatinus
ENSOANG00000010699
I
0.824
ENSCSAG00000015361
Chlorocebus sabaeus
ENSCSAG00000015361
I
0.824
Gfo_R007869
Geospiza fortis
Gfo_R007869
I
0.824
Gfo_R013682
Geospiza fortis
Gfo_R013682
I
0.823
Tal_R009020
Tyto alba
Tal_R009020
I
0.823
ENSAPLG00000005128
Anas platyrhynchos
ENSAPLG00000005128
I
0.823
gli3
Danio rerio
ENSDARG00000052131
I
0.822
ENSAMXG00000002477
Astyanax mexicanus
ENSAMXG00000002477
I
0.820
ENSPSIG00000008752
Pelodiscus sinensis
ENSPSIG00000008752
I
0.819
ENSPFOG00000005116
Poecilia formosa
ENSPFOG00000005116
I
0.819
GLI2
Meleagris gallopavo
ENSMGAG00000011872
I
0.819
ENSXMAG00000006443
Xiphophorus maculatus
ENSXMAG00000006443
I
0.819
ENSFALG00000013217
Ficedula albicollis
ENSFALG00000013217
I
0.819
Brh_R010932
Buceros rhinoceros
Brh_R010932
I
0.819
Afo_R006826
Aptenodytes forsteri
Afo_R006826
I
0.819
Gfo_R001212
Geospiza fortis
Gfo_R001212
I
0.819
Cmyd_10009086
Chelonia mydas
Cmyd_10009086
I
0.819
GLI2
Gallus gallus
ENSGALG00000011630
I
0.819
ENSAPLG00000015141
Anas platyrhynchos
ENSAPLG00000015141
I
0.819
GLI2
Taeniopygia guttata
ENSTGUG00000004599
I
0.819
Aan_R003640
Calypte anna
Aan_R003640
I
0.819
Tal_R006208
Tyto alba
Tal_R006208
I
0.819
ENSAMXG00000006646
Astyanax mexicanus
ENSAMXG00000006646
I
0.817
gli2b
Danio rerio
ENSDARG00000020884
I
0.817
Pvit_06470
Pogona vitticeps
Pvit_06470
I
0.817
gli2b
Takifugu rubripes
ENSTRUG00000010444
I
0.817
Ogr02489
Ophisaurus gracilis
Ogr02489
I
0.817
GLI2
Anolis carolinensis
ENSACAG00000004133
I
0.817
ENSAMXG00000003125
Astyanax mexicanus
ENSAMXG00000003125
I
0.817
ENSLOCG00000011983
Lepisosteus oculatus
ENSLOCG00000011983
I
0.815
gli1
Danio rerio
ENSDARG00000101244
I
0.815
ENSGALG00000014639
Gallus gallus
ENSGALG00000014639
I
0.813
ENSMGAG00000003540
Meleagris gallopavo
ENSMGAG00000003540
I
0.813
GLI2
Otolemur garnettii
ENSOGAG00000032438
I
0.810
ENSSHAG00000004233
Sarcophilus harrisii
ENSSHAG00000004233
I
0.810
GLI2
Monodelphis domestica
ENSMODG00000000245
I
0.810
GLI3
Microcebus murinus
ENSMICG00000010785
I
0.809
GLI3
Echinops telfairi
ENSETEG00000003955
I
0.809
gli2b
Tetraodon nigroviridis
ENSTNIG00000017828
I
0.807
ENSPANG00000024168
Papio anubis
ENSPANG00000024168
I
0.805
GLI2
Pan troglodytes
ENSPTRG00000012413
I
0.805
Gli2
Rattus norvegicus
ENSRNOG00000007261
I
0.805
gli2b
Tetraodon nigroviridis
ENSTNIG00000010251
I
0.805
GLI2
Sus scrofa
ENSSSCG00000015733
I
0.805
ENSSTOG00000004582
Ictidomys tridecemlineatus
ENSSTOG00000004582
I
0.805
ENSMMUP00000002494
Macaca fascicularis
ENSMMUP00000002494
I
0.805
ENSPPYG00000012778
Pongo abelii
ENSPPYG00000012778
I
0.805
ENSP00000390436-D1
Bos grunniens
ENSP00000390436-D1
I
0.805
Myotis_brandtii_Gli2_10019076
Myotis brandtii
Myotis_brandtii_Gli2_10019076
I
0.805
GLI2
Oryctolagus cuniculus
ENSOCUG00000000638
I
0.805
ENSMPUG00000000986
Mustela putorius furo
ENSMPUG00000000986
I
0.805
ENSCJAG00000013342
Callithrix jacchus
ENSCJAG00000013342
I
0.805
Gli2
Mus musculus
ENSMUSG00000048402
D
0.805
GLI2
Felis catus
ENSFCAG00000014531
I
0.805
GLI2
Cavia porcellus
ENSCPOG00000015189
I
0.805
GLI2
Homo sapiens
ENSG00000074047
D
0.805
GLI2
Dasypus novemcinctus
ENSDNOG00000008730
I
0.805
ENSCSAG00000016668
Chlorocebus sabaeus
ENSCSAG00000016668
I
0.805
ENSNLEG00000000944
Nomascus leucogenys
ENSNLEG00000000944
I
0.805
GLI2
Macaca mulatta
ENSMMUG00000001868
I
0.805
GLI2
Bos taurus
ENSBTAG00000011682
I
0.805
ENSOARG00000013052
Ovis aries
ENSOARG00000013052
I
0.805
ENSAMEG00000008708
Ailuropoda melanoleuca
ENSAMEG00000008708
I
0.805
GLI2
Canis familiaris
ENSCAFG00000004821
I
0.805
GLI2
Procavia capensis
ENSPCAG00000001704
I
0.803
GLI1
Echinops telfairi
ENSETEG00000006674
I
0.801
GLI2
Gorilla gorilla
ENSGGOG00000009653
I
0.801
ENSBTAP00000008704-D1
Bos grunniens
ENSBTAP00000008704-D1
I
0.799
ENSSTOG00000020366
Ictidomys tridecemlineatus
ENSSTOG00000020366
I
0.799
ENSP00000228682
Macaca fascicularis
ENSP00000228682
I
0.799
ENSSHAG00000006652
Sarcophilus harrisii
ENSSHAG00000006652
I
0.799
GLI1
Loxodonta africana
ENSLAFG00000022910
I
0.799
GLI1
Gorilla gorilla
ENSGGOG00000001974
I
0.799
GLI1
Otolemur garnettii
ENSOGAG00000005219
I
0.799
GLI1
Homo sapiens
ENSG00000111087
D
0.799
GLI1
Oryctolagus cuniculus
ENSOCUG00000011128
I
0.799
GLI1
Tursiops truncatus
ENSTTRG00000013086
I
0.799
GLI1
Felis catus
ENSFCAG00000002081
I
0.799
GLI1
Equus caballus
ENSECAG00000011246
I
0.799
GLI1
Dasypus novemcinctus
ENSDNOG00000017512
I
0.799
ENSCSAG00000004897
Chlorocebus sabaeus
ENSCSAG00000004897
I
0.799
Gli1
Dipodomys ordii
ENSDORG00000007124
I
0.799
ENSAMEG00000004878
Ailuropoda melanoleuca
ENSAMEG00000004878
I
0.799
Gli1
Rattus norvegicus
ENSRNOG00000025120
I
0.799
ENSPPYG00000004689
Pongo abelii
ENSPPYG00000004689
I
0.799
Gli1
Mus musculus
ENSMUSG00000025407
D
0.799
ENSOARG00000006674
Ovis aries
ENSOARG00000006674
I
0.799
Myotis_brandtii_GLI1_10018379
Myotis brandtii
Myotis_brandtii_GLI1_10018379
I
0.799
GLI1
Callithrix jacchus
ENSCJAG00000007324
I
0.799
ENSPANG00000017044
Papio anubis
ENSPANG00000017044
I
0.799
ENSNLEG00000017337
Nomascus leucogenys
ENSNLEG00000017337
I
0.799
GLI1
Canis familiaris
ENSCAFG00000000223
I
0.799
ENSMPUG00000001825
Mustela putorius furo
ENSMPUG00000001825
I
0.799
GLI1
Cavia porcellus
ENSCPOG00000005414
I
0.799
GLI1
Myotis lucifugus
ENSMLUG00000001013
I
0.799
ENSMEUG00000009702
Macropus eugenii
ENSMEUG00000009702
I
0.799
GLI1
Bos taurus
ENSBTAG00000006631
I
0.799
GLI1
Ochotona princeps
ENSOPRG00000006483
I
0.799
GLI1
Pteropus vampyrus
ENSPVAG00000012109
I
0.799
GLI1
Macaca mulatta
ENSMMUG00000022058
I
0.799
GLI1
Pan troglodytes
ENSPTRG00000005133
I
0.799
GLI2
Tursiops truncatus
ENSTTRG00000002058
I
0.796
ENSCING00000012018
Ciona intestinalis
ENSCING00000012018
I
0.796
ENSCSAVG00000009575
Ciona savignyi
ENSCSAVG00000009575
I
0.796
ENSECAG00000008016
Equus caballus
ENSECAG00000008016
I
0.795
gli2b
Tetraodon nigroviridis
ENSTNIG00000013668
I
0.794
gli2b
Takifugu rubripes
ENSTRUG00000007692
I
0.794
ENSPFOG00000019294
Poecilia formosa
ENSPFOG00000019294
I
0.792
gli2b
Oryzias latipes
ENSORLG00000012490
I
0.792
ENSONIG00000006298
Oreochromis niloticus
ENSONIG00000006298
I
0.792
ENSXMAG00000001777
Xiphophorus maculatus
ENSXMAG00000001777
I
0.792
ENSGACG00000004834
Gasterosteus aculeatus
ENSGACG00000004834
I
0.792
GLI1
Procavia capensis
ENSPCAG00000015756
I
0.785
gli1
Xenopus tropicalis
XB-GENE-482644
I
0.781
gli1.S
Xenopus laevis
XB-GENE-864895
I
0.781
gli1
Tetraodon nigroviridis
ENSTNIG00000007058
I
0.779
Gli3
Rattus norvegicus
ENSRNOG00000014395
I
0.778
Gli3
Mus musculus
ENSMUSG00000021318
D
0.778
GLI3
Cavia porcellus
ENSCPOG00000013233
I
0.778
ENSSTOG00000020844
Ictidomys tridecemlineatus
ENSSTOG00000020844
I
0.778
ENSTGUG00000001834
Taeniopygia guttata
ENSTGUG00000001834
I
0.778
HelroG111329
Helobdella robusta
HelroG111329
I
0.777
gli1
Takifugu rubripes
ENSTRUG00000014998
I
0.776
gli1
Gasterosteus aculeatus
ENSGACG00000006458
I
0.776
ENSGMOG00000007975
Gadus morhua
ENSGMOG00000007975
I
0.776
gli1
Oryzias latipes
ENSORLG00000005455
I
0.774
ENSPFOG00000006269
Poecilia formosa
ENSPFOG00000006269
I
0.774
ENSXMAG00000017965
Xiphophorus maculatus
ENSXMAG00000017965
I
0.774
ENSONIG00000005084
Oreochromis niloticus
ENSONIG00000005084
I
0.774
ENSONIG00000003608
Oreochromis niloticus
ENSONIG00000003608
I
0.773
ENSPFOG00000014778
Poecilia formosa
ENSPFOG00000014778
I
0.773
ENSONIG00000004472
Oreochromis niloticus
ENSONIG00000004472
I
0.771
ENSLOCG00000002028
Lepisosteus oculatus
ENSLOCG00000002028
I
0.771
ENSCJAG00000003076
Callithrix jacchus
ENSCJAG00000003076
I
0.769
ENSGMOG00000010335
Gadus morhua
ENSGMOG00000010335
I
0.768
gli2.S
Xenopus laevis
XB-GENE-6251939
I
0.767
gli2a
Danio rerio
ENSDARG00000025641
I
0.767
gli2.L
Xenopus laevis
XB-GENE-17342592
I
0.767
fgenesh2_pg.scaffold_169000072
Branchiostoma floridae
fgenesh2_pg.scaffold_169000072
I
0.763
fgenesh2_pg.scaffold_137000068
Branchiostoma floridae
fgenesh2_pg.scaffold_137000068
I
0.763
gli2b
Gasterosteus aculeatus
ENSGACG00000001547
I
0.761
gli2b
Takifugu rubripes
ENSTRUG00000001954
I
0.761