CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000015664
(
Gadus morhua
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGMOG00000015664
T096873_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.777
0.925
PRDM16
M10224_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.777
0.925
PRDM16
M10225_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.777
0.925
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000016846
C2H2 ZF
87
108
YRCEDCDELFTTSLELRRHQKY
ENSGMOP00000016846
C2H2 ZF
136
158
HECKDCEKIFPNEYSLGQHMIVH
ENSGMOP00000016846
C2H2 ZF
164
186
YKCDQCPKAFNWKSNLIRHQMSH
ENSGMOP00000016846
C2H2 ZF
192
215
FECENCDKVFTDPSNLQRHIRSQH
ENSGMOP00000016846
C2H2 ZF
221
243
HTCPECGKTFATSSGLKQHKHIH
ENSGMOP00000016846
C2H2 ZF
249
271
FICEVCHKSYTQFSNLCRHKRMH
ENSGMOP00000016846
C2H2 ZF
278
299
IKCKDCGQMFSTTSSLNKHRRF
ENSGMOP00000016846
C2H2 ZF
849
871
YTCRYCGKIFPRSANLTRHLRTH
ENSGMOP00000016846
C2H2 ZF
877
900
YRCKYCDRSFSISSNLQRHVRNIH
ENSGMOP00000016846
C2H2 ZF
906
928
FKCHLCNRCFGQQTNLDRHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Gadus morhua
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
si:ch211-263k4.2
Oryzias latipes
ENSORLG00000004492
I
0.816
si:ch211-263k4.2
Gasterosteus aculeatus
ENSGACG00000006600
I
0.816
ENSPFOG00000010341
Poecilia formosa
ENSPFOG00000010341
I
0.816
ENSXMAG00000019072
Xiphophorus maculatus
ENSXMAG00000019072
I
0.816
PRDM16
Danio rerio
ENSDARG00000078324
I
0.815
ENSONIG00000002121
Oreochromis niloticus
ENSONIG00000002121
I
0.811
ENSAMXG00000014024
Astyanax mexicanus
ENSAMXG00000014024
I
0.805
ENSFALG00000009580
Ficedula albicollis
ENSFALG00000009580
I
0.801
Aan_R005955
Calypte anna
Aan_R005955
I
0.801
ENSLOCG00000005336
Lepisosteus oculatus
ENSLOCG00000005336
I
0.795
si:ch211-263k4.2
Takifugu rubripes
ENSTRUG00000014772
N
0.793
si:ch211-263k4.2
Tetraodon nigroviridis
ENSTNIG00000011975
N
0.793
PRDM16
Sus scrofa
ENSSSCG00000021490
I
0.784
ENSPSIG00000004093
Pelodiscus sinensis
ENSPSIG00000004093
I
0.781
PRDM16
Equus caballus
ENSECAG00000017045
I
0.781
PRDM16
Otolemur garnettii
ENSOGAG00000005055
I
0.781
XP_002938538
Xenopus tropicalis
XP_002938538
I
0.780
ENSAPLG00000005898
Anas platyrhynchos
ENSAPLG00000005898
I
0.779
Afo_R003306
Aptenodytes forsteri
Afo_R003306
I
0.779
Brh_R007819
Buceros rhinoceros
Brh_R007819
I
0.779
Gfo_R009744
Geospiza fortis
Gfo_R009744
I
0.779
ENSGALG00000001063
Gallus gallus
ENSGALG00000001063
I
0.779
PRDM16
Loxodonta africana
ENSLAFG00000001071
I
0.779
PRDM16
Meleagris gallopavo
ENSMGAG00000001857
I
0.779
Alligator_sinensis_CCG011602.1
Alligator sinensis
Alligator_sinensis_CCG011602.1
I
0.779
ENSP00000417899-D2
Bos grunniens
ENSP00000417899-D2
I
0.778
PRDM16
Bos taurus
ENSBTAG00000018965
I
0.778
ENSP00000270722
Macaca fascicularis
ENSP00000270722
I
0.777
ENSPPYG00000001968
Pongo abelii
ENSPPYG00000001968
I
0.777
PRDM16
Homo sapiens
ENSG00000142611
D
0.777
PRDM16
Gorilla gorilla
ENSGGOG00000003763
I
0.777
PRDM16
Macaca mulatta
ENSMMUG00000009350
I
0.777
PRDM16
Canis familiaris
ENSCAFG00000019473
I
0.774
Ogr15306
Ophisaurus gracilis
Ogr15306
I
0.758