Tal_R009965 (Tyto alba)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03615 (GCM) IPR003902 Tal_R009965 T198175_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.740 0.740
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.675 0.675
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.675 0.675
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.675 0.675
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.675 0.675
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.642 0.642
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.626 0.626
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R009965 GCM 10 132

Links

Other GCM family TFs
Other Tyto alba TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Brh_R007088 Buceros rhinoceros Brh_R007088 I 0.748
Gfo_R006501 Geospiza fortis Gfo_R006501 I 0.748
Afo_R013226 Aptenodytes forsteri Afo_R013226 I 0.748
ENSAPLG00000002817 Anas platyrhynchos ENSAPLG00000002817 I 0.740
GCM2 Taeniopygia guttata ENSTGUG00000005756 D 0.740
ENSFALG00000013344 Ficedula albicollis ENSFALG00000013344 I 0.740
Aan_R001550 Calypte anna Aan_R001550 I 0.740
GCM2 Gallus gallus ENSGALG00000012768 I 0.732
GCM2 Meleagris gallopavo ENSMGAG00000003533 I 0.724
ENSPSIG00000004698 Pelodiscus sinensis ENSPSIG00000004698 I 0.699
Cmyd_10006831 Chelonia mydas Cmyd_10006831 I 0.691
ENSPANG00000026314 Papio anubis ENSPANG00000026314 I 0.683
GCM2 Monodelphis domestica ENSMODG00000010371 I 0.683
ENSMICG00000004238 Microcebus murinus ENSMICG00000004238 I 0.683
gcm2 Danio rerio ENSDARG00000045413 I 0.683
ENSNLEG00000000645 Nomascus leucogenys ENSNLEG00000000645 I 0.675
GCM2 Macaca mulatta ENSMMUG00000007719 I 0.675
ENSOARG00000015521 Ovis aries ENSOARG00000015521 I 0.675
ENSSHAG00000010590 Sarcophilus harrisii ENSSHAG00000010590 I 0.675
GCM2 Pan troglodytes ENSPTRG00000017724 I 0.675
ENSCSAG00000007467 Chlorocebus sabaeus ENSCSAG00000007467 I 0.675
ENSP00000368805 Macaca fascicularis ENSP00000368805 I 0.675
Alligator_sinensis_CCG008975.1 Alligator sinensis Alligator_sinensis_CCG008975.1 I 0.675
GCM2 Gorilla gorilla ENSGGOG00000023360 I 0.675
ENSPPYG00000016228 Pongo abelii ENSPPYG00000016228 I 0.675
GCM2 Homo sapiens ENSG00000124827 D 0.675
gcm2 Xenopus tropicalis XB-GENE-492156 I 0.675
GCM2 Otolemur garnettii ENSOGAG00000012176 I 0.667
ENSP00000368805-D1 Bos grunniens ENSP00000368805-D1 I 0.667
ENSAMEG00000002669 Ailuropoda melanoleuca ENSAMEG00000002669 I 0.667
GCM2 Cavia porcellus ENSCPOG00000011254 I 0.667
GCM2 Ornithorhynchus anatinus ENSOANG00000007191 I 0.667
GCM2 Felis catus ENSFCAG00000001608 I 0.667
ENSTSYG00000006813 Tarsius syrichta ENSTSYG00000006813 I 0.667
GCM2 Callithrix jacchus ENSCJAG00000019182 I 0.667
GCM2 Tursiops truncatus ENSTTRG00000003674 I 0.667
ENSMPUG00000000633 Mustela putorius furo ENSMPUG00000000633 I 0.667
GCM2 Bos taurus ENSBTAG00000018787 I 0.667
GCM2 Tupaia belangeri ENSTBEG00000006181 I 0.659
ENSSTOG00000009563 Ictidomys tridecemlineatus ENSSTOG00000009563 I 0.659
Gcm2 Rattus norvegicus ENSRNOG00000015008 I 0.659
GCM2 Oryctolagus cuniculus ENSOCUG00000017698 I 0.659
GCM2 Equus caballus ENSECAG00000017632 I 0.659
ENSLACG00000009363 Latimeria chalumnae ENSLACG00000009363 I 0.659
ENSONIG00000009885 Oreochromis niloticus ENSONIG00000009885 I 0.659
GCM2 Choloepus hoffmanni ENSCHOG00000011562 I 0.659
ENSAMXG00000006073 Astyanax mexicanus ENSAMXG00000006073 I 0.659
GCM2 Canis familiaris ENSCAFG00000009747 I 0.659
gcm2.S Xenopus laevis XB-GENE-866131 I 0.650
GCM2 Dasypus novemcinctus ENSDNOG00000003701 I 0.650
GCM2 Myotis lucifugus ENSMLUG00000004637 I 0.650
GCM2 Vicugna pacos ENSVPAG00000003006 I 0.650
Gcm2 Mus musculus ENSMUSG00000021362 I 0.650
GCM2 Loxodonta africana ENSLAFG00000007475 I 0.642
ENSTRUG00000003586 Takifugu rubripes ENSTRUG00000003586 D 0.642
Pvit_11235 Pogona vitticeps Pvit_11235 I 0.642
ENSLOCG00000013145 Lepisosteus oculatus ENSLOCG00000013145 I 0.642
GCM2 Anolis carolinensis ENSACAG00000008677 I 0.634
GCM2 Ochotona princeps ENSOPRG00000012641 I 0.634
GCM2 Procavia capensis ENSPCAG00000011887 I 0.634
gcm2 Gasterosteus aculeatus ENSGACG00000001157 I 0.634
ENSPFOG00000008781 Poecilia formosa ENSPFOG00000008781 I 0.634
ENSXMAG00000002726 Xiphophorus maculatus ENSXMAG00000002726 I 0.634
gcm2 Oryzias latipes ENSORLG00000019715 I 0.626
gcm2 Tetraodon nigroviridis ENSTNIG00000005042 D 0.626
GCM2 Pteropus vampyrus ENSPVAG00000004876 I 0.610
ENSGMOG00000012709 Gadus morhua ENSGMOG00000012709 I 0.610