GLYMA06G44290 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA06G44290 T218775_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.658 0.754
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA06G44290.2 Homeodomain 19 75
GLYMA06G44290.4 Homeodomain 19 75

Links

Other Homeodomain family TFs
Other Glycine max TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.3148s0041 Boechera stricta Bostr.3148s0041 I 0.838
Thhalv10003131m.g Eutrema salsugineum Thhalv10003131m.g I 0.838
fgenesh2_kg.8__392__AT5G44180.1 Arabidopsis lyrata fgenesh2_kg.8__392__AT5G44180.1 I 0.838
Cagra.0381s0009 Capsella grandiflora Cagra.0381s0009 I 0.837
Carubv10025737m.g Capsella rubella Carubv10025737m.g I 0.837
VIT_12s0028g03080 Vitis vinifera VIT_12s0028g03080 I 0.833
POPTR_0017s04760 Populus trichocarpa POPTR_0017s04760 I 0.826
Bo7g067190 Brassica oleracea Bo7g067190 I 0.825
Bra033725 Brassica rapa Bra033725 I 0.824
SapurV1A.0693s0030 Salix purpurea SapurV1A.0693s0030 I 0.822
29983.m003128 Ricinus communis 29983.m003128 I 0.822
Eucgr.K01058 Eucalyptus grandis Eucgr.K01058 I 0.822
cassava43653.valid.m1 Manihot esculenta cassava43653.valid.m1 I 0.822
POPTR_0007s01330 Populus trichocarpa POPTR_0007s01330 I 0.821
RLT2 Arabidopsis thaliana AT5G44180 I 0.821
SapurV1A.0118s0310 Salix purpurea SapurV1A.0118s0310 I 0.821
SapurV1A.3547s0010 Salix purpurea SapurV1A.3547s0010 I 0.821
SapurV1A.3333s0010 Salix purpurea SapurV1A.3333s0010 I 0.821
PK06068.1 Cannabis sativa PK06068.1 I 0.810
Ca_11272 Cicer arietinum Ca_11272 I 0.804
Solyc07g053610.2 Solanum lycopersicum Solyc07g053610.2 I 0.801
Aquca_051_00028 Aquilegia coerulea Aquca_051_00028 I 0.800
Lus10018634.g Linum usitatissimum Lus10018634.g I 0.799
Lus10039870.g Linum usitatissimum Lus10039870.g I 0.799
Gorai.008G155100 Gossypium raimondii Gorai.008G155100 I 0.789
Ciclev10014022m.g Citrus clementina Ciclev10014022m.g I 0.789
orange1.1g004454m.g Citrus sinensis orange1.1g004454m.g I 0.789
TCM_008214 Theobroma cacao TCM_008214 I 0.789
AMTR_s00058p00137050 Amborella trichopoda AMTR_s00058p00137050 I 0.769
SELMODRAFT_447019 Selaginella moellendorffii SELMODRAFT_447019 I 0.767
SELMODRAFT_447089 Selaginella moellendorffii SELMODRAFT_447089 I 0.767
gene17756-v1.0-hybrid Fragaria vesca gene17756-v1.0-hybrid I 0.765
GSMUA_Achr6G26980_001 Musa acuminata GSMUA_Achr6G26980_001 I 0.748
Lus10017688.g Linum usitatissimum Lus10017688.g N 0.732
SELMODRAFT_428998 Selaginella moellendorffii SELMODRAFT_428998 I 0.720
SELMODRAFT_422900 Selaginella moellendorffii SELMODRAFT_422900 I 0.720
Bra010869 Brassica rapa Bra010869 I 0.690
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.690
Bo3g143570 Brassica oleracea Bo3g143570 I 0.690
Solyc02g077660.2 Solanum lycopersicum Solyc02g077660.2 I 0.681
Eucgr.D00596 Eucalyptus grandis Eucgr.D00596 I 0.680
MTR_4g078860 Medicago truncatula MTR_4g078860 N 0.675
SapurV1A.0012s0660 Salix purpurea SapurV1A.0012s0660 I 0.663
PK13272.1 Cannabis sativa PK13272.1 I 0.663
Ca_00337 Cicer arietinum Ca_00337 I 0.659
MDP0000192108 Malus domestica MDP0000192108 I 0.659
orange1.1g000279m.g Citrus sinensis orange1.1g000279m.g I 0.659
Ca_06343 Cicer arietinum Ca_06343 I 0.659
Thhalv10006543m.g Eutrema salsugineum Thhalv10006543m.g I 0.659
Cla009803 Citrullus lanatus Cla009803 I 0.659
gene29752-v1.0-hybrid Fragaria vesca gene29752-v1.0-hybrid I 0.659
Bostr.15697s0165 Boechera stricta Bostr.15697s0165 I 0.659
evm.TU.supercontig_27.2 Carica papaya evm.TU.supercontig_27.2 I 0.659
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.659
Cucsa.046480 Cucumis sativus Cucsa.046480 I 0.659
GLYMA07G32180 Glycine max GLYMA07G32180 I 0.659
cassava1593.valid.m1 Manihot esculenta cassava1593.valid.m1 I 0.659
Ciclev10014023m.g Citrus clementina Ciclev10014023m.g I 0.659
Pm010098 Prunus mume Pm010098 I 0.659
GLYMA13G24370 Glycine max GLYMA13G24370 I 0.659
GLYMA13G30860 Glycine max GLYMA13G30860 I 0.659
PRUPE_ppa000115mg Prunus persica PRUPE_ppa000115mg I 0.659
MTR_4g088375 Medicago truncatula MTR_4g088375 I 0.659
MTR_2g014490 Medicago truncatula MTR_2g014490 I 0.659
RLT1 Arabidopsis thaliana AT1G28420 D 0.658
BGIOSGA022450 Oryza indica BGIOSGA022450 I 0.658
ORUFI05G27630 Oryza rufipogon ORUFI05G27630 I 0.658
ONIVA05G27640 Oryza nivara ONIVA05G27640 I 0.658
ORGLA05G0222200 Oryza glaberrima ORGLA05G0222200 I 0.658
HB-1 Arabidopsis lyrata fgenesh2_kg.1__3015__AT1G28420.1 I 0.658
OGLUM05G27370 Oryza glumaepatula OGLUM05G27370 I 0.658
Lus10015400.g Linum usitatissimum Lus10015400.g I 0.658
Cagra.1822s0015 Capsella grandiflora Cagra.1822s0015 I 0.658
LPERR05G21380 Leersia perrieri LPERR05G21380 I 0.658
OBART05G25730 Oryza barthii OBART05G25730 I 0.658
MDP0000207866 Malus domestica MDP0000207866 I 0.657
Bo5g055970 Brassica oleracea Bo5g055970 I 0.657
SapurV1A.0032s0540 Salix purpurea SapurV1A.0032s0540 I 0.657
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.657
VIT_10s0003g00290 Vitis vinifera VIT_10s0003g00290 I 0.657
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.657
Ca_21400 Cicer arietinum Ca_21400 I 0.657
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.657
Cla008712 Citrullus lanatus Cla008712 I 0.657
Bra032908 Brassica rapa Bra032908 I 0.656
Lus10025454.g Linum usitatissimum Lus10025454.g I 0.656
Lus10015325.g Linum usitatissimum Lus10015325.g I 0.656
evm.TU.supercontig_83.97 Carica papaya evm.TU.supercontig_83.97 I 0.656
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.653
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.653
PDK_20s1402391g002 Phoenix dactylifera PDK_20s1402391g002 I 0.648
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.648
POPTR_0011s05660 Populus trichocarpa POPTR_0011s05660 I 0.648
MDP0000288192 Malus domestica MDP0000288192 I 0.647
Lus10013979.g Linum usitatissimum Lus10013979.g I 0.646
Gorai.010G243500 Gossypium raimondii Gorai.010G243500 I 0.643
Gorai.010G256900 Gossypium raimondii Gorai.010G256900 I 0.643
TCM_029805 Theobroma cacao TCM_029805 I 0.643
mgf006858m Mimulus guttatus mgf006858m I 0.626
Sb03g030782 Sorghum bicolor Sb03g030782 I 0.625
Sb03g030770 Sorghum bicolor Sb03g030770 I 0.625
BRADI2G16647 Brachypodium distachyon BRADI2G16647 I 0.624
BRADI2G46230 Brachypodium distachyon BRADI2G46230 I 0.623
MLOC_62571 Hordeum vulgare MLOC_62571 I 0.623
F775_01844 Aegilops tauschii F775_01844 I 0.623
GRMZM2G159357 Zea mays GRMZM2G159357 I 0.621
GRMZM2G060541 Zea mays GRMZM2G060541 I 0.621
LPERR01G22320 Leersia perrieri LPERR01G22320 I 0.621
BGIOSGA004179 Oryza indica BGIOSGA004179 I 0.621
OGLUM01G29920 Oryza glumaepatula OGLUM01G29920 I 0.621
OPUNC01G25990 Oryza punctata OPUNC01G25990 I 0.621
ORUFI01G29060 Oryza rufipogon ORUFI01G29060 I 0.621
OS01G0672201 Oryza sativa OS01G0672201 I 0.621
Si004333m.g Setaria italica Si004333m.g I 0.621
OB01G35240 Oryza brachyantha OB01G35240 I 0.621
ONIVA01G29520 Oryza nivara ONIVA01G29520 I 0.621
OMERI01G23740 Oryza meridionalis OMERI01G23740 I 0.621
30190.m011307 Ricinus communis 30190.m011307 I 0.615
Si020949m.g Setaria italica Si020949m.g I 0.615
GRMZM2G122750 Zea mays GRMZM2G122750 I 0.615
GRMZM2G125294 Zea mays GRMZM2G125294 I 0.615
Pavir.J20612 Panicum virgatum Pavir.J20612 I 0.614
Pavir.Ca00923 Panicum virgatum Pavir.Ca00923 I 0.614
mgf006635m Mimulus guttatus mgf006635m I 0.611
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.607
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.606
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.606
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.606
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.606
Bo9g006450 Brassica oleracea Bo9g006450 I 0.602
Bra034196 Brassica rapa Bra034196 I 0.602