PAX6 (Tursiops truncatus)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		ENSTTRG00000002399 T237523_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX6
M00342_2.00 		Homo sapiens
NNNRCDMATTANNN
NNNTAATKHGYNNN		 PBM
Barrera et al.(2016)
PAX6_REF 		0.790 0.790
Pax6
M00540_2.00 		Mus musculus
CBAATTAA
TTAATTVG		 PBM
Berger et al.(2008)
Pax6_3838 		0.790 0.790
PAX6
M03291_2.00 		Homo sapiens
DTWYACGCWTGANTGMDYH
DRHKCANTCAWGCGTRWAH		 SELEX
Jolma et al.(2013)
PAX6_1 		0.790 0.790
PAX6
M05412_2.00 		Homo sapiens
NYACGCHYSRNYRMNYN
NRNKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX 		0.790 0.790
PAX6
M05414_2.00 		Homo sapiens
NYRCGCNYSRNYRVNYN
NRNBYRNYSRNGCGYRN		 SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX 		0.790 0.790
PAX6
M02689_2.00 		Homo sapiens
TTYACGCWTSANTK
MANTSAWGCGTRAA		 SELEX
Mathelier et al.(2014)
MA0069.1 		0.790 0.790
PAX6
M09216_2.00 		Homo sapiens
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C 		0.790 0.790
Pax6
M09217_2.00 		Mus musculus
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C 		0.790 0.790
PAX6
M10806_2.00 		Homo sapiens
NHNNTTYACGCWTSANTKVHH
DDBMANTSAWGCGTRAANNDN		 Transfac
Matys et al.(2006)
V$PAX6_01 		0.790 0.790
PAX6
M10807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX6_Q2 		0.790 0.790
PAX6
M00336_2.00 		Homo sapiens
RTGCACAC
GTGTGCAY		 PBM
Barrera et al.(2016)
PAX6_F258S 		0.790 0.790
PAX6
M00340_2.00 		Homo sapiens
NNNNNRN
NYNNNNN		 PBM
Barrera et al.(2016)
PAX6_R242T 		0.790 0.790
PAX6
M00341_2.00 		Homo sapiens
BTSCCCSGSC
GSCSGGGSAV		 PBM
Barrera et al.(2016)
PAX6_R26G 		0.790 0.790
PAX6
M05413_2.00 		Homo sapiens
DYRCGCWTSRNYRMNYN
NRNKYRNYSAWGCGYRH		 SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX 		0.790 0.790
PAX6
M05415_2.00 		Homo sapiens
NYACGCHYSRNYRMHYN
NRDKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX 		0.790 0.790
PAX6
M00335_2.00 		Homo sapiens
BRNNNNNN
NNNNNNYV		 PBM
Barrera et al.(2016)
PAX6_A79E 		0.782 0.782
PAX6
M00337_2.00 		Homo sapiens
NMTAATTANNN
NNNTAATTAKN		 PBM
Barrera et al.(2016)
PAX6_P118R 		0.782 0.782
PAX6
M00338_2.00 		Homo sapiens
WSGVRVDR
YHBYBCSW		 PBM
Barrera et al.(2016)
PAX6_P68S 		0.782 0.782
PAX6
M00339_2.00 		Homo sapiens
NNNNSGKVGGHNN
NNDCCBMCSNNNN		 PBM
Barrera et al.(2016)
PAX6_R128C 		0.782 0.782
PAX6
M00343_2.00 		Homo sapiens
NNNNCCCVKCNBN
NVNGMBGGGNNNN		 PBM
Barrera et al.(2016)
PAX6_S119R 		0.782 0.782
PAX6
M00344_2.00 		Homo sapiens
NNMSASGBYNNN
NNNRVCSTSKNN		 PBM
Barrera et al.(2016)
PAX6_V126D 		0.782 0.782
ey
M03896_2.00 		Drosophila melanogaster
CKAATTAD
HTAATTMG		 SELEX
Nitta et al.(2015)
ey_1 		0.726 0.726
ey
M03897_2.00 		Drosophila melanogaster
HTAATCKMATTAD
HTAATKMGATTAD		 SELEX
Nitta et al.(2015)
ey_2 		0.726 0.726
ey
M03898_2.00 		Drosophila melanogaster
WAAYYRRTTN
NAAYYRRTTW		 SELEX
Nitta et al.(2015)
ey_3 		0.726 0.726
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000002247 Paired box 48 142
ENSTTRP00000002247 Homeodomain 225 243
ENSTTRP00000002247 Homeodomain 268 281

Links

Other Homeodomain,Paired box family TFs
Other Tursiops truncatus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAX6 Pan troglodytes ENSPTRG00000003474 I 0.903
Gfo_R001537 Geospiza fortis Gfo_R001537 I 0.871
Aan_R006618 Calypte anna Aan_R006618 I 0.871
ENSFALG00000010839 Ficedula albicollis ENSFALG00000010839 I 0.871
ENSAPLG00000004928 Anas platyrhynchos ENSAPLG00000004928 I 0.871
PAX6 Ornithorhynchus anatinus ENSOANG00000015149 I 0.855
Afo_R014630 Aptenodytes forsteri Afo_R014630 I 0.815
ENSMEUG00000015900 Macropus eugenii ENSMEUG00000015900 I 0.790
ENSOARG00000016191 Ovis aries ENSOARG00000016191 I 0.790
PAX6 Oryctolagus cuniculus ENSOCUG00000011075 I 0.790
PAX6 Otolemur garnettii ENSOGAG00000007857 I 0.790
PAX6 Ochotona princeps ENSOPRG00000001678 I 0.790
PAX6 Microcebus murinus ENSMICG00000004089 I 0.790
PAX6 Myotis lucifugus ENSMLUG00000006517 I 0.790
Pax6 Mus musculus ENSMUSG00000027168 D 0.790
ENSPANG00000005448 Papio anubis ENSPANG00000005448 I 0.790
PAX6 Macaca mulatta ENSMMUG00000016810 I 0.790
ENSNLEG00000017888 Nomascus leucogenys ENSNLEG00000017888 I 0.790
ENSMPUG00000011295 Mustela putorius furo ENSMPUG00000011295 I 0.790
ENSPSIG00000012748 Pelodiscus sinensis ENSPSIG00000012748 I 0.790
Cmyd_10016391 Chelonia mydas Cmyd_10016391 I 0.790
Alligator_sinensis_CCG012954.1 Alligator sinensis Alligator_sinensis_CCG012954.1 I 0.790
ENSP00000368401-D1 Bos grunniens ENSP00000368401-D1 I 0.790
ENSP00000368424 Macaca fascicularis ENSP00000368424 I 0.790
Pvit_09512 Pogona vitticeps Pvit_09512 I 0.790
Ogr12767 Ophisaurus gracilis Ogr12767 I 0.790
PAX6 Tupaia belangeri ENSTBEG00000004748 I 0.790
PAX6 Sus scrofa ENSSSCG00000013320 I 0.790
pax6 Xenopus tropicalis XB-GENE-484088 I 0.790
ENSPPYG00000003386 Pongo abelii ENSPPYG00000003386 I 0.790
PAX6 Loxodonta africana ENSLAFG00000015520 I 0.790
Pax6 Rattus norvegicus ENSRNOG00000004410 I 0.790
ENSSHAG00000016310 Sarcophilus harrisii ENSSHAG00000016310 I 0.790
PAX6 Procavia capensis ENSPCAG00000005165 I 0.790
ENSSTOG00000003211 Ictidomys tridecemlineatus ENSSTOG00000003211 I 0.790
PAX6 Cavia porcellus ENSCPOG00000007245 I 0.790
PAX6 Dasypus novemcinctus ENSDNOG00000000761 I 0.790
PAX6 Felis catus ENSFCAG00000007094 I 0.790
PAX6 Callithrix jacchus ENSCJAG00000005942 I 0.790
PAX6 Bos taurus ENSBTAG00000004561 I 0.790
ENSAMEG00000006908 Ailuropoda melanoleuca ENSAMEG00000006908 I 0.790
PAX6 Anolis carolinensis ENSACAG00000002252 I 0.790
PAX6 Homo sapiens ENSG00000007372 D 0.790
ENSCSAG00000005253 Chlorocebus sabaeus ENSCSAG00000005253 I 0.790
PAX6 Gorilla gorilla ENSGGOG00000010246 I 0.790
PAX6 Gallus gallus ENSGALG00000012123 I 0.790
pax6a Danio rerio ENSDARG00000103379 I 0.782
pax6b Danio rerio ENSDARG00000045936 I 0.782
ENSLACG00000015337 Latimeria chalumnae ENSLACG00000015337 I 0.782
ENSLOCG00000004578 Lepisosteus oculatus ENSLOCG00000004578 I 0.782
ENSGMOG00000012304 Gadus morhua ENSGMOG00000012304 I 0.782
pax6.S Xenopus laevis XB-GENE-6464331 I 0.774
pax6.L Xenopus laevis XB-GENE-865046 I 0.774
ENSXMAG00000014260 Xiphophorus maculatus ENSXMAG00000014260 I 0.774
ENSPFOG00000016987 Poecilia formosa ENSPFOG00000016987 I 0.774
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.774
ENSONIG00000005541 Oreochromis niloticus ENSONIG00000005541 I 0.774
pax6b Oryzias latipes ENSORLG00000009913 I 0.774
ENSTSYG00000011965 Tarsius syrichta ENSTSYG00000011965 I 0.766
pax6b Tetraodon nigroviridis ENSTNIG00000013804 I 0.766
ENSAMXG00000013008 Astyanax mexicanus ENSAMXG00000013008 I 0.766
ENSXMAG00000016421 Xiphophorus maculatus ENSXMAG00000016421 I 0.766
ENSONIG00000004074 Oreochromis niloticus ENSONIG00000004074 I 0.766
pax6b Takifugu rubripes ENSTRUG00000006935 I 0.766
ENSORLG00000000847 Oryzias latipes ENSORLG00000000847 I 0.758
ENSAMXG00000001228 Astyanax mexicanus ENSAMXG00000001228 I 0.758
ENSTRUG00000017375 Takifugu rubripes ENSTRUG00000017375 I 0.750
ENSTNIG00000002471 Tetraodon nigroviridis ENSTNIG00000002471 I 0.750
PAX6 Equus caballus ENSECAG00000021000 I 0.750
ENSGACG00000002490 Gasterosteus aculeatus ENSGACG00000002490 I 0.750
SMAR013763 Strigamia maritima SMAR013763 I 0.742
L798_11483 Zootermopsis nevadensis L798_11483 I 0.742
ENSGMOG00000019087 Gadus morhua ENSGMOG00000019087 I 0.742
PAX6 Monodelphis domestica ENSMODG00000009611 I 0.742
GK13702 Drosophila willistoni FBgn0215710 I 0.734
GI14081 Drosophila mojavensis FBgn0136835 I 0.734
ey Drosophila pseudoobscura FBgn0018538 I 0.734
GF22818 Drosophila ananassae FBgn0099812 I 0.734
ey Drosophila persimilis FBgn0043659 I 0.734
GB50342 Apis mellifera GB50342 I 0.726
L798_00712 Zootermopsis nevadensis L798_00712 I 0.726
Sakowv30026828m.g Saccoglossus kowalevskii Sakowv30026828m.g I 0.726
GE14559 Drosophila yakuba FBgn0232158 I 0.726
ACYPI067710 Acyrthosiphon pisum ACYPI067710 I 0.726
TC008176 Tribolium castaneum TC008176 I 0.726
NV15820 Nasonia vitripennis NV15820 I 0.726
ey Drosophila virilis FBgn0028754 I 0.726
ey Drosophila melanogaster FBgn0005558 D 0.726
ey Drosophila sechellia FBgn0068720 I 0.726
GG16399 Drosophila erecta FBgn0108631 I 0.726
PAX6 Echinops telfairi ENSETEG00000002655 I 0.718
CGI_10027695 Crassostrea gigas CGI_10027695 I 0.718
DAPPUDRAFT_249978 Daphnia pulex DAPPUDRAFT_249978 I 0.718
ENSCING00000006503 Ciona intestinalis ENSCING00000006503 I 0.718
PAX6 Sorex araneus ENSSARG00000011424 I 0.718
ENSCSAVG00000007987 Ciona savignyi ENSCSAVG00000007987 I 0.718
ACUA016154 Anopheles culicifacies ACUA016154 I 0.710
ACHR009845 Anopheles christyi ACHR009845 I 0.710
AGAP000067 Anopheles gambiae AGAP000067 I 0.710
ACYPI008177 Acyrthosiphon pisum ACYPI008177 I 0.710
AALB006643 Anopheles albimanus AALB006643 I 0.710
AARA001110 Anopheles arabiensis AARA001110 I 0.710
AEPI005798 Anopheles epiroticus AEPI005798 I 0.710
AQUA008313 Anopheles quadriannulatus AQUA008313 I 0.710
AMIN002132 Anopheles minimus AMIN002132 I 0.710
AMEM002691 Anopheles merus AMEM002691 I 0.710
AFUN011570 Anopheles funestus AFUN011570 I 0.710
ASIS012617 Anopheles sinensis ASIS012617 I 0.710
AFAF017899 Anopheles farauti AFAF017899 I 0.710
AMEC013051 Anopheles melas AMEC013051 I 0.710
ASTEI06205 Anopheles stephensi ASTEI06205 I 0.710
AATE014626 Anopheles atroparvus AATE014626 I 0.710
TC007409 Tribolium castaneum TC007409 I 0.710
ADIR000973 Anopheles dirus ADIR000973 I 0.710
GI14042 Drosophila mojavensis FBgn0136796 I 0.702
GJ13300 Drosophila virilis FBgn0200526 I 0.702
GK13683 Drosophila willistoni FBgn0215691 I 0.702
GL17563 Drosophila persimilis FBgn0155166 I 0.702
GH23963 Drosophila grimshawi FBgn0131420 I 0.702
CpipJ_CPIJ006398 Culex pipiens CpipJ_CPIJ006398 I 0.702
GA27636 Drosophila pseudoobscura FBgn0249001 I 0.702
GB41504 Apis mellifera GB41504 I 0.702
CPIJ006398 Culex quinquefasciatus CPIJ006398 I 0.702
DAPPUDRAFT_249991 Daphnia pulex DAPPUDRAFT_249991 I 0.702
Cflo_00481--XP_394648.3_APIME Camponotus floridanus Cflo_00481--XP_394648.3_APIME I 0.702
NV17076 Nasonia vitripennis NV17076 I 0.702
Hsal_09597--XP_394648.3_APIME Harpegnathos saltator Hsal_09597--XP_394648.3_APIME I 0.702