ENSTRUG00000017375 (Takifugu rubripes)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		ENSTRUG00000017375 T237519_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX6
M00342_2.00 		Homo sapiens
NNNRCDMATTANNN
NNNTAATKHGYNNN		 PBM
Barrera et al.(2016)
PAX6_REF 		0.962 0.962
Pax6
M00540_2.00 		Mus musculus
CBAATTAA
TTAATTVG		 PBM
Berger et al.(2008)
Pax6_3838 		0.962 0.962
PAX6
M03291_2.00 		Homo sapiens
DTWYACGCWTGANTGMDYH
DRHKCANTCAWGCGTRWAH		 SELEX
Jolma et al.(2013)
PAX6_1 		0.962 0.962
PAX6
M05412_2.00 		Homo sapiens
NYACGCHYSRNYRMNYN
NRNKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX 		0.956 0.956
PAX6
M05414_2.00 		Homo sapiens
NYRCGCNYSRNYRVNYN
NRNBYRNYSRNGCGYRN		 SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX 		0.956 0.956
PAX6
M02689_2.00 		Homo sapiens
TTYACGCWTSANTK
MANTSAWGCGTRAA		 SELEX
Mathelier et al.(2014)
MA0069.1 		0.956 0.956
PAX6
M09216_2.00 		Homo sapiens
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C 		0.956 0.956
Pax6
M09217_2.00 		Mus musculus
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C 		0.956 0.956
PAX6
M10806_2.00 		Homo sapiens
NHNNTTYACGCWTSANTKVHH
DDBMANTSAWGCGTRAANNDN		 Transfac
Matys et al.(2006)
V$PAX6_01 		0.962 0.962
PAX6
M10807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX6_Q2 		0.962 0.962
PAX6
M05413_2.00 		Homo sapiens
DYRCGCWTSRNYRMNYN
NRNKYRNYSAWGCGYRH		 SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX 		0.962 0.962
PAX6
M05415_2.00 		Homo sapiens
NYACGCHYSRNYRMHYN
NRDKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX 		0.956 0.956
PAX6
M00335_2.00 		Homo sapiens
BRNNNNNN
NNNNNNYV		 PBM
Barrera et al.(2016)
PAX6_A79E 		0.951 0.951
PAX6
M00336_2.00 		Homo sapiens
RTGCACAC
GTGTGCAY		 PBM
Barrera et al.(2016)
PAX6_F258S 		0.951 0.951
PAX6
M00337_2.00 		Homo sapiens
NMTAATTANNN
NNNTAATTAKN		 PBM
Barrera et al.(2016)
PAX6_P118R 		0.951 0.951
PAX6
M00338_2.00 		Homo sapiens
WSGVRVDR
YHBYBCSW		 PBM
Barrera et al.(2016)
PAX6_P68S 		0.951 0.951
PAX6
M00339_2.00 		Homo sapiens
NNNNSGKVGGHNN
NNDCCBMCSNNNN		 PBM
Barrera et al.(2016)
PAX6_R128C 		0.956 0.956
PAX6
M00340_2.00 		Homo sapiens
NNNNNRN
NYNNNNN		 PBM
Barrera et al.(2016)
PAX6_R242T 		0.956 0.956
PAX6
M00341_2.00 		Homo sapiens
BTSCCCSGSC
GSCSGGGSAV		 PBM
Barrera et al.(2016)
PAX6_R26G 		0.956 0.956
PAX6
M00343_2.00 		Homo sapiens
NNNNCCCVKCNBN
NVNGMBGGGNNNN		 PBM
Barrera et al.(2016)
PAX6_S119R 		0.951 0.951
PAX6
M00344_2.00 		Homo sapiens
NNMSASGBYNNN
NNNRVCSTSKNN		 PBM
Barrera et al.(2016)
PAX6_V126D 		0.951 0.951
ey
M03896_2.00 		Drosophila melanogaster
CKAATTAD
HTAATTMG		 SELEX
Nitta et al.(2015)
ey_1 		0.918 0.918
ey
M03897_2.00 		Drosophila melanogaster
HTAATCKMATTAD
HTAATKMGATTAD		 SELEX
Nitta et al.(2015)
ey_2 		0.918 0.918
ey
M03898_2.00 		Drosophila melanogaster
WAAYYRRTTN
NAAYYRRTTW		 SELEX
Nitta et al.(2015)
ey_3 		0.918 0.918
toy
M03899_2.00 		Drosophila melanogaster
TTYACGCWTGASTGMACAN
NTGTKCASTCAWGCGTRAA		 SELEX
Nitta et al.(2015)
toy_1 		0.890 0.890
toy
M03900_2.00 		Drosophila melanogaster
NTYACGCWTSAVTGMRCNN
NNGYKCABTSAWGCGTRAN		 SELEX
Nitta et al.(2015)
toy_2 		0.890 0.890
toy
M03901_2.00 		Drosophila melanogaster
VATTANBHAYGSWYSRN
NYSRWSCRTDVNTAATB		 SELEX
Nitta et al.(2015)
toy_3 		0.890 0.890
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000044510 Paired box 31 166
ENSTRUP00000044510 Homeodomain 252 308
ENSTRUP00000044511 Paired box 23 147
ENSTRUP00000044511 Homeodomain 233 289
ENSTRUP00000044512 Paired box 4 139
ENSTRUP00000044512 Homeodomain 221 277

Links

Other Homeodomain,Paired box family TFs
Other Takifugu rubripes TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000016421 Xiphophorus maculatus ENSXMAG00000016421 I 0.978
ENSONIG00000004074 Oreochromis niloticus ENSONIG00000004074 I 0.978
pax6b Danio rerio ENSDARG00000045936 I 0.967
ENSLOCG00000004578 Lepisosteus oculatus ENSLOCG00000004578 I 0.967
ENSGMOG00000012304 Gadus morhua ENSGMOG00000012304 I 0.967
pax6a Danio rerio ENSDARG00000103379 I 0.967
ENSP00000368401-D1 Bos grunniens ENSP00000368401-D1 I 0.962
Pax6 Rattus norvegicus ENSRNOG00000004410 I 0.962
ENSPSIG00000012748 Pelodiscus sinensis ENSPSIG00000012748 I 0.962
PAX6 Felis catus ENSFCAG00000007094 I 0.962
ENSSHAG00000016310 Sarcophilus harrisii ENSSHAG00000016310 I 0.962
PAX6 Dasypus novemcinctus ENSDNOG00000000761 I 0.962
PAX6 Cavia porcellus ENSCPOG00000007245 I 0.962
ENSCSAG00000005253 Chlorocebus sabaeus ENSCSAG00000005253 I 0.962
PAX6 Microcebus murinus ENSMICG00000004089 I 0.962
ENSNLEG00000017888 Nomascus leucogenys ENSNLEG00000017888 I 0.962
PAX6 Procavia capensis ENSPCAG00000005165 I 0.962
PAX6 Homo sapiens ENSG00000007372 D 0.962
ENSLACG00000015337 Latimeria chalumnae ENSLACG00000015337 I 0.962
ENSORLG00000000847 Oryzias latipes ENSORLG00000000847 I 0.962
PAX6 Loxodonta africana ENSLAFG00000015520 I 0.962
PAX6 Ochotona princeps ENSOPRG00000001678 I 0.962
pax6 Xenopus tropicalis XB-GENE-484088 I 0.962
PAX6 Gorilla gorilla ENSGGOG00000010246 I 0.962
ENSPANG00000005448 Papio anubis ENSPANG00000005448 I 0.962
ENSGACG00000002490 Gasterosteus aculeatus ENSGACG00000002490 I 0.962
PAX6 Gallus gallus ENSGALG00000012123 I 0.962
ENSSTOG00000003211 Ictidomys tridecemlineatus ENSSTOG00000003211 I 0.962
PAX6 Sus scrofa ENSSSCG00000013320 I 0.962
PAX6 Otolemur garnettii ENSOGAG00000007857 I 0.962
PAX6 Myotis lucifugus ENSMLUG00000006517 I 0.962
ENSP00000368424 Macaca fascicularis ENSP00000368424 I 0.962
PAX6 Anolis carolinensis ENSACAG00000002252 I 0.962
PAX6 Macaca mulatta ENSMMUG00000016810 I 0.962
PAX6 Oryctolagus cuniculus ENSOCUG00000011075 I 0.962
Alligator_sinensis_CCG012954.1 Alligator sinensis Alligator_sinensis_CCG012954.1 I 0.962
Pax6 Mus musculus ENSMUSG00000027168 D 0.962
ENSOARG00000016191 Ovis aries ENSOARG00000016191 I 0.962
ENSMPUG00000011295 Mustela putorius furo ENSMPUG00000011295 I 0.962
PAX6 Tupaia belangeri ENSTBEG00000004748 I 0.962
ENSAMEG00000006908 Ailuropoda melanoleuca ENSAMEG00000006908 I 0.962
ENSTNIG00000002471 Tetraodon nigroviridis ENSTNIG00000002471 I 0.962
PAX6 Callithrix jacchus ENSCJAG00000005942 I 0.962
Pvit_09512 Pogona vitticeps Pvit_09512 I 0.962
PAX6 Bos taurus ENSBTAG00000004561 I 0.962
PAX6 Sorex araneus ENSSARG00000011424 I 0.960
pax6.L Xenopus laevis XB-GENE-865046 I 0.956
pax6.S Xenopus laevis XB-GENE-6464331 I 0.956
ENSPFOG00000016987 Poecilia formosa ENSPFOG00000016987 I 0.956
pax6b Oryzias latipes ENSORLG00000009913 I 0.956
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.956
ENSAMXG00000013008 Astyanax mexicanus ENSAMXG00000013008 I 0.956
ENSXMAG00000014260 Xiphophorus maculatus ENSXMAG00000014260 I 0.956
ENSONIG00000005541 Oreochromis niloticus ENSONIG00000005541 I 0.956
pax6b Takifugu rubripes ENSTRUG00000006935 I 0.951
pax6b Tetraodon nigroviridis ENSTNIG00000013804 I 0.951
ENSAMXG00000001228 Astyanax mexicanus ENSAMXG00000001228 I 0.951
Sakowv30026828m.g Saccoglossus kowalevskii Sakowv30026828m.g I 0.945
ENSGMOG00000019087 Gadus morhua ENSGMOG00000019087 I 0.945
PAX6 Equus caballus ENSECAG00000021000 I 0.934
SMAR013763 Strigamia maritima SMAR013763 I 0.929
PAX6 Monodelphis domestica ENSMODG00000009611 I 0.929
L798_11483 Zootermopsis nevadensis L798_11483 I 0.928
ey Drosophila sechellia FBgn0068720 I 0.923
TC008176 Tribolium castaneum TC008176 I 0.923
GE14559 Drosophila yakuba FBgn0232158 I 0.923
ey Drosophila melanogaster FBgn0005558 D 0.923
GG16399 Drosophila erecta FBgn0108631 I 0.923
ey Drosophila virilis FBgn0028754 I 0.923
ACYPI067710 Acyrthosiphon pisum ACYPI067710 I 0.923
GF22818 Drosophila ananassae FBgn0099812 I 0.918
ey Drosophila persimilis FBgn0043659 I 0.918
GI14081 Drosophila mojavensis FBgn0136835 I 0.918
GB50342 Apis mellifera GB50342 I 0.918
NV15820 Nasonia vitripennis NV15820 I 0.918
ey Drosophila pseudoobscura FBgn0018538 I 0.918
GK13702 Drosophila willistoni FBgn0215710 I 0.918
CGI_10027695 Crassostrea gigas CGI_10027695 I 0.918
DAPPUDRAFT_249991 Daphnia pulex DAPPUDRAFT_249991 I 0.912
L798_00712 Zootermopsis nevadensis L798_00712 I 0.912
DAPPUDRAFT_249978 Daphnia pulex DAPPUDRAFT_249978 I 0.912
NV17076 Nasonia vitripennis NV17076 I 0.907
LotgiG133720 Lottia gigantea LotgiG133720 I 0.907
Cflo_00481--XP_394648.3_APIME Camponotus floridanus Cflo_00481--XP_394648.3_APIME I 0.907
Hsal_09597--XP_394648.3_APIME Harpegnathos saltator Hsal_09597--XP_394648.3_APIME I 0.907
ACYPI008177 Acyrthosiphon pisum ACYPI008177 I 0.907
GB41504 Apis mellifera GB41504 I 0.907
ENSCING00000006503 Ciona intestinalis ENSCING00000006503 I 0.901
ENSCSAVG00000007987 Ciona savignyi ENSCSAVG00000007987 I 0.901
PAX6 Echinops telfairi ENSETEG00000002655 I 0.901
TC007409 Tribolium castaneum TC007409 I 0.901
GK13683 Drosophila willistoni FBgn0215691 I 0.896
GA27636 Drosophila pseudoobscura FBgn0249001 I 0.896
Cmyd_10016391 Chelonia mydas Cmyd_10016391 I 0.896
GJ13300 Drosophila virilis FBgn0200526 I 0.896
GL17563 Drosophila persimilis FBgn0155166 I 0.896
GH23963 Drosophila grimshawi FBgn0131420 I 0.896
Ogr12767 Ophisaurus gracilis Ogr12767 I 0.896
GI14042 Drosophila mojavensis FBgn0136796 I 0.896
GF21877 Drosophila ananassae FBgn0098877 I 0.890
toy Drosophila melanogaster FBgn0019650 D 0.890
GE14563 Drosophila yakuba FBgn0232162 I 0.890
ISCW021772 Ixodes scapularis ISCW021772 I 0.890
GM13021 Drosophila sechellia FBgn0167952 I 0.890
GG16402 Drosophila erecta FBgn0108634 I 0.890
TMUE_s0038005250 Trichuris muris TMUE_s0038005250 I 0.885
TTRE_0000173501 Trichuris trichiura TTRE_0000173501 I 0.885
D918_01592 Trichuris suis D918_01592 I 0.885
HelroG80374 Helobdella robusta HelroG80374 I 0.879
ENSPPYG00000003386 Pongo abelii ENSPPYG00000003386 I 0.874
Afo_R014630 Aptenodytes forsteri Afo_R014630 I 0.874
SMU15027897 Schmidtea mediterranea SMU15027897 I 0.874
AGAP000063 Anopheles gambiae AGAP000063 I 0.863
AFUN011575 Anopheles funestus AFUN011575 I 0.863
PHUM097050 Pediculus humanus PHUM097050 I 0.863
AMEC021831 Anopheles melas AMEC021831 I 0.863
ASTEI06200 Anopheles stephensi ASTEI06200 I 0.863
AARA001115 Anopheles arabiensis AARA001115 I 0.863
ASIS012967 Anopheles sinensis ASIS012967 I 0.863
AQUA008308 Anopheles quadriannulatus AQUA008308 I 0.863
AALB006354 Anopheles albimanus AALB006354 I 0.863
AMIN002127 Anopheles minimus AMIN002127 I 0.863
AFAF009619 Anopheles farauti AFAF009619 I 0.854
L892_g3713 Steinernema scapterisci L892_g3713 I 0.852
L596_g12356 Steinernema carpocapsae L596_g12356 I 0.852
ISCW006352 Ixodes scapularis ISCW006352 I 0.852
AAEL002321 Aedes aegypti AAEL002321 I 0.852
CBN04513 Caenorhabditis brenneri CBN04513 I 0.846
tetur09g00660 Tetranychus urticae tetur09g00660 I 0.846
CRE07226 Caenorhabditis remanei CRE07226 I 0.846
Smp_160670 Schistosoma mansoni Smp_160670 I 0.841
ASIS012617 Anopheles sinensis ASIS012617 I 0.841
T265_09221 Opisthorchis viverrini T265_09221 I 0.841
SSTP_0001059400 Strongyloides stercoralis SSTP_0001059400 I 0.835
AALB006643 Anopheles albimanus AALB006643 I 0.835
SVE_0819200 Strongyloides venezuelensis SVE_0819200 I 0.835
SPAL_0001466800 Strongyloides papillosus SPAL_0001466800 I 0.835
vab-3 Caenorhabditis elegans WBGene00006870 I 0.835
PTRK_0000512100 Parastrongyloides trichosuri PTRK_0000512100 I 0.835
ACUA016154 Anopheles culicifacies ACUA016154 I 0.835
SMTD_0000837201 Schistosoma mattheei SMTD_0000837201 I 0.835
A_05170 Schistosoma haematobium A_05170 I 0.835
RSKR_0000862000 Rhabditophanes kr3021 RSKR_0000862000 I 0.835
CPIJ006398 Culex quinquefasciatus CPIJ006398 I 0.830
GD24416 Drosophila simulans FBgn0195753 I 0.830
AFUN011570 Anopheles funestus AFUN011570 I 0.830
AMEM002691 Anopheles merus AMEM002691 I 0.830
ACUA021227 Anopheles culicifacies ACUA021227 I 0.830
ACHR009845 Anopheles christyi ACHR009845 I 0.830
AMEC013051 Anopheles melas AMEC013051 I 0.830
AARA001110 Anopheles arabiensis AARA001110 I 0.830
AATE014626 Anopheles atroparvus AATE014626 I 0.830
CpipJ_CPIJ006398 Culex pipiens CpipJ_CPIJ006398 I 0.830
ASTEI06205 Anopheles stephensi ASTEI06205 I 0.830
AGAP000067 Anopheles gambiae AGAP000067 I 0.830
AQUA008313 Anopheles quadriannulatus AQUA008313 I 0.830
ADIR000973 Anopheles dirus ADIR000973 I 0.830
AFAF017899 Anopheles farauti AFAF017899 I 0.830
AMIN002132 Anopheles minimus AMIN002132 I 0.830
AEPI005798 Anopheles epiroticus AEPI005798 I 0.830
AEPI005803 Anopheles epiroticus AEPI005803 I 0.824
EFV57892 Trichinella spiralis EFV57892 I 0.824
CpipJ_CPIJ006390 Culex pipiens CpipJ_CPIJ006390 I 0.824
CPIJ006390 Culex quinquefasciatus CPIJ006390 I 0.824
Smp_170750 Schistosoma mansoni Smp_170750 I 0.819
MCINX016249 Melitaea cinxia MCINX016249 I 0.819
D915_07175 Fasciola hepatica D915_07175 I 0.819
BXY_1643500 Bursaphelenchus xylophilus BXY_1643500 I 0.813
D917_00854 Trichinella nativa D917_00854 I 0.806
ADAC003449 Anopheles darlingi ADAC003449 I 0.802
HelroG173449 Helobdella robusta HelroG173449 I 0.797
ACHR008920 Anopheles christyi ACHR008920 I 0.797
MCOS_0000220101 Mesocestoides corti MCOS_0000220101 I 0.797
ADIR000968 Anopheles dirus ADIR000968 I 0.792
csin110224 Clonorchis sinensis csin110224 I 0.791
ADAC001560 Anopheles darlingi ADAC001560 I 0.758
HmN_000466300 Hymenolepis microstoma HmN_000466300 I 0.753
ENSMEUG00000015900 Macropus eugenii ENSMEUG00000015900 I 0.753
TsM_000166900 Taenia solium TsM_000166900 I 0.753
PAX6 Tursiops truncatus ENSTTRG00000002399 I 0.750
NEMVEDRAFT_v1g239535 Nematostella vectensis NEMVEDRAFT_v1g239535 I 0.747
NEMVEDRAFT_v1g168908 Nematostella vectensis NEMVEDRAFT_v1g168908 I 0.742
MESCA003564 Megaselia scalaris MESCA003564 I 0.742
TTAC_0000231001 Hydatigera taeniaeformis TTAC_0000231001 I 0.742
LLOJ005149 Lutzomyia longipalpis LLOJ005149 I 0.742
T265_14971 Opisthorchis viverrini T265_14971 I 0.742
ENSFALG00000010839 Ficedula albicollis ENSFALG00000010839 I 0.725
PAX6 Pan troglodytes ENSPTRG00000003474 I 0.725
Gfo_R001537 Geospiza fortis Gfo_R001537 I 0.725
Aan_R006618 Calypte anna Aan_R006618 I 0.725
ENSAPLG00000004928 Anas platyrhynchos ENSAPLG00000004928 I 0.725
PAX2 Gorilla gorilla ENSGGOG00000014908 I 0.718
PAX2 Loxodonta africana ENSLAFG00000002388 I 0.718
ENSPANG00000021132 Papio anubis ENSPANG00000021132 I 0.718
PAX2 Procavia capensis ENSPCAG00000006623 I 0.718
PAX2 Felis catus ENSFCAG00000011602 I 0.718
PAX2 Homo sapiens ENSG00000075891 D 0.718
PAX2 Equus caballus ENSECAG00000021123 I 0.718
PAX2 Tursiops truncatus ENSTTRG00000015106 I 0.718
PAX2 Ochotona princeps ENSOPRG00000007096 I 0.718
ENSP00000359319-D1 Bos grunniens ENSP00000359319-D1 I 0.718
ENSP00000359319 Macaca fascicularis ENSP00000359319 I 0.718
PAX2 Bos taurus ENSBTAG00000021566 I 0.718
ENSAMEG00000017523 Ailuropoda melanoleuca ENSAMEG00000017523 I 0.718
ENSMEUG00000013247 Macropus eugenii ENSMEUG00000013247 I 0.718
PAX2 Oryctolagus cuniculus ENSOCUG00000012860 I 0.718
PAX2 Macaca mulatta ENSMMUG00000009163 I 0.718
PAX2 Otolemur garnettii ENSOGAG00000015274 I 0.718
PAX2 Microcebus murinus ENSMICG00000001357 I 0.718
PAX2 Monodelphis domestica ENSMODG00000019353 I 0.718
ENSPPYG00000002572 Pongo abelii ENSPPYG00000002572 I 0.718
PAX2 Canis familiaris ENSCAFG00000009709 I 0.718
PAX2 Pan troglodytes ENSPTRG00000002853 I 0.718
PAX2 Dasypus novemcinctus ENSDNOG00000013328 I 0.718
ENSSHAG00000014328 Sarcophilus harrisii ENSSHAG00000014328 I 0.718
PAX2 Erinaceus europaeus ENSEEUG00000001995 I 0.718
Myotis_brandtii_PAX2_10025650 Myotis brandtii Myotis_brandtii_PAX2_10025650 I 0.718
pax2.L Xenopus laevis XB-GENE-486805 I 0.718
PAX2 Callithrix jacchus ENSCJAG00000017397 I 0.718
Pax2 Mus musculus ENSMUSG00000004231 D 0.718
PAX2 Cavia porcellus ENSCPOG00000000939 I 0.718
PAX2 Sus scrofa ENSSSCG00000010556 I 0.718
PAX2 Pteropus vampyrus ENSPVAG00000002148 I 0.718
PAX6 Ornithorhynchus anatinus ENSOANG00000015149 I 0.714
csin101119 Clonorchis sinensis csin101119 I 0.714