Ogr12767 (Ophisaurus gracilis)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		Ogr12767 T237725_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX6
M00342_2.00 		Homo sapiens
NNNRCDMATTANNN
NNNTAATKHGYNNN		 PBM
Barrera et al.(2016)
PAX6_REF 		0.994 0.994
Pax6
M00540_2.00 		Mus musculus
CBAATTAA
TTAATTVG		 PBM
Berger et al.(2008)
Pax6_3838 		0.994 0.994
PAX6
M03291_2.00 		Homo sapiens
DTWYACGCWTGANTGMDYH
DRHKCANTCAWGCGTRWAH		 SELEX
Jolma et al.(2013)
PAX6_1 		0.994 0.994
PAX6
M05412_2.00 		Homo sapiens
NYACGCHYSRNYRMNYN
NRNKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX 		0.994 0.994
PAX6
M05414_2.00 		Homo sapiens
NYRCGCNYSRNYRVNYN
NRNBYRNYSRNGCGYRN		 SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX 		0.994 0.994
PAX6
M02689_2.00 		Homo sapiens
TTYACGCWTSANTK
MANTSAWGCGTRAA		 SELEX
Mathelier et al.(2014)
MA0069.1 		0.994 0.994
PAX6
M09216_2.00 		Homo sapiens
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C 		0.994 0.994
Pax6
M09217_2.00 		Mus musculus
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C 		0.994 0.994
PAX6
M10806_2.00 		Homo sapiens
NHNNTTYACGCWTSANTKVHH
DDBMANTSAWGCGTRAANNDN		 Transfac
Matys et al.(2006)
V$PAX6_01 		0.994 0.994
PAX6
M10807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX6_Q2 		0.994 0.994
PAX6
M00336_2.00 		Homo sapiens
RTGCACAC
GTGTGCAY		 PBM
Barrera et al.(2016)
PAX6_F258S 		0.994 0.994
PAX6
M05413_2.00 		Homo sapiens
DYRCGCWTSRNYRMNYN
NRNKYRNYSAWGCGYRH		 SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX 		0.994 0.994
PAX6
M05415_2.00 		Homo sapiens
NYACGCHYSRNYRMHYN
NRDKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX 		0.994 0.994
PAX6
M00335_2.00 		Homo sapiens
BRNNNNNN
NNNNNNYV		 PBM
Barrera et al.(2016)
PAX6_A79E 		0.988 0.988
PAX6
M00337_2.00 		Homo sapiens
NMTAATTANNN
NNNTAATTAKN		 PBM
Barrera et al.(2016)
PAX6_P118R 		0.988 0.988
PAX6
M00338_2.00 		Homo sapiens
WSGVRVDR
YHBYBCSW		 PBM
Barrera et al.(2016)
PAX6_P68S 		0.988 0.988
PAX6
M00339_2.00 		Homo sapiens
NNNNSGKVGGHNN
NNDCCBMCSNNNN		 PBM
Barrera et al.(2016)
PAX6_R128C 		0.988 0.988
PAX6
M00340_2.00 		Homo sapiens
NNNNNRN
NYNNNNN		 PBM
Barrera et al.(2016)
PAX6_R242T 		0.988 0.988
PAX6
M00341_2.00 		Homo sapiens
BTSCCCSGSC
GSCSGGGSAV		 PBM
Barrera et al.(2016)
PAX6_R26G 		0.988 0.988
PAX6
M00343_2.00 		Homo sapiens
NNNNCCCVKCNBN
NVNGMBGGGNNNN		 PBM
Barrera et al.(2016)
PAX6_S119R 		0.988 0.988
PAX6
M00344_2.00 		Homo sapiens
NNMSASGBYNNN
NNNRVCSTSKNN		 PBM
Barrera et al.(2016)
PAX6_V126D 		0.988 0.988
ey
M03896_2.00 		Drosophila melanogaster
CKAATTAD
HTAATTMG		 SELEX
Nitta et al.(2015)
ey_1 		0.924 0.924
ey
M03897_2.00 		Drosophila melanogaster
HTAATCKMATTAD
HTAATKMGATTAD		 SELEX
Nitta et al.(2015)
ey_2 		0.924 0.924
ey
M03898_2.00 		Drosophila melanogaster
WAAYYRRTTN
NAAYYRRTTW		 SELEX
Nitta et al.(2015)
ey_3 		0.924 0.924
toy
M03899_2.00 		Drosophila melanogaster
TTYACGCWTGASTGMACAN
NTGTKCASTCAWGCGTRAA		 SELEX
Nitta et al.(2015)
toy_1 		0.895 0.895
toy
M03900_2.00 		Drosophila melanogaster
NTYACGCWTSAVTGMRCNN
NNGYKCABTSAWGCGTRAN		 SELEX
Nitta et al.(2015)
toy_2 		0.895 0.895
toy
M03901_2.00 		Drosophila melanogaster
VATTANBHAYGSWYSRN
NYSRWSCRTDVNTAATB		 SELEX
Nitta et al.(2015)
toy_3 		0.895 0.895
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr12767 Paired box 46 184
Ogr12767 Homeodomain 267 312

Links

Other Homeodomain,Paired box family TFs
Other Ophisaurus gracilis TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10016391 Chelonia mydas Cmyd_10016391 I 1.000
ENSPPYG00000003386 Pongo abelii ENSPPYG00000003386 I 0.994
ENSLACG00000015337 Latimeria chalumnae ENSLACG00000015337 I 0.988
Alligator_sinensis_CCG012954.1 Alligator sinensis Alligator_sinensis_CCG012954.1 I 0.988
PAX6 Tupaia belangeri ENSTBEG00000004748 I 0.988
pax6a Danio rerio ENSDARG00000103379 I 0.988
pax6b Danio rerio ENSDARG00000045936 I 0.988
PAX6 Homo sapiens ENSG00000007372 D 0.988
ENSGMOG00000012304 Gadus morhua ENSGMOG00000012304 I 0.988
ENSLOCG00000004578 Lepisosteus oculatus ENSLOCG00000004578 I 0.988
ENSONIG00000005541 Oreochromis niloticus ENSONIG00000005541 I 0.982
pax6.L Xenopus laevis XB-GENE-865046 I 0.982
pax6b Oryzias latipes ENSORLG00000009913 I 0.982
ENSPFOG00000016987 Poecilia formosa ENSPFOG00000016987 I 0.982
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.982
pax6.S Xenopus laevis XB-GENE-6464331 I 0.977
ENSONIG00000004074 Oreochromis niloticus ENSONIG00000004074 I 0.971
ENSORLG00000000847 Oryzias latipes ENSORLG00000000847 I 0.959
PAX6 Monodelphis domestica ENSMODG00000009611 I 0.959
ENSGACG00000002490 Gasterosteus aculeatus ENSGACG00000002490 I 0.947
Sakowv30026828m.g Saccoglossus kowalevskii Sakowv30026828m.g I 0.936
ENSPANG00000005448 Papio anubis ENSPANG00000005448 I 0.934
ENSCSAG00000005253 Chlorocebus sabaeus ENSCSAG00000005253 I 0.934
Pax6 Mus musculus ENSMUSG00000027168 D 0.934
PAX6 Ochotona princeps ENSOPRG00000001678 I 0.934
PAX6 Otolemur garnettii ENSOGAG00000007857 I 0.934
PAX6 Microcebus murinus ENSMICG00000004089 I 0.934
PAX6 Gallus gallus ENSGALG00000012123 I 0.934
ENSOARG00000016191 Ovis aries ENSOARG00000016191 I 0.934
PAX6 Dasypus novemcinctus ENSDNOG00000000761 I 0.934
PAX6 Bos taurus ENSBTAG00000004561 I 0.934
ENSSTOG00000003211 Ictidomys tridecemlineatus ENSSTOG00000003211 I 0.934
PAX6 Anolis carolinensis ENSACAG00000002252 I 0.934
PAX6 Macaca mulatta ENSMMUG00000016810 I 0.934
PAX6 Myotis lucifugus ENSMLUG00000006517 I 0.934
pax6 Xenopus tropicalis XB-GENE-484088 I 0.934
Pvit_09512 Pogona vitticeps Pvit_09512 I 0.934
ENSMPUG00000011295 Mustela putorius furo ENSMPUG00000011295 I 0.934
PAX6 Sus scrofa ENSSSCG00000013320 I 0.934
Pax6 Rattus norvegicus ENSRNOG00000004410 I 0.934
PAX6 Callithrix jacchus ENSCJAG00000005942 I 0.934
PAX6 Procavia capensis ENSPCAG00000005165 I 0.934
PAX6 Gorilla gorilla ENSGGOG00000010246 I 0.934
ENSSHAG00000016310 Sarcophilus harrisii ENSSHAG00000016310 I 0.934
ENSPSIG00000012748 Pelodiscus sinensis ENSPSIG00000012748 I 0.934
PAX6 Sorex araneus ENSSARG00000011424 I 0.931
PAX6 Loxodonta africana ENSLAFG00000015520 I 0.929
PAX6 Cavia porcellus ENSCPOG00000007245 I 0.929
ENSNLEG00000017888 Nomascus leucogenys ENSNLEG00000017888 I 0.929
ENSP00000368401-D1 Bos grunniens ENSP00000368401-D1 I 0.929
ENSAMEG00000006908 Ailuropoda melanoleuca ENSAMEG00000006908 I 0.929
ENSP00000368424 Macaca fascicularis ENSP00000368424 I 0.929
PAX6 Felis catus ENSFCAG00000007094 I 0.929
PAX6 Oryctolagus cuniculus ENSOCUG00000011075 I 0.929
ey Drosophila melanogaster FBgn0005558 D 0.924
PAX6 Echinops telfairi ENSETEG00000002655 I 0.919
L798_00712 Zootermopsis nevadensis L798_00712 I 0.918
pax6b Tetraodon nigroviridis ENSTNIG00000013804 I 0.918
ENSXMAG00000014260 Xiphophorus maculatus ENSXMAG00000014260 I 0.918
pax6b Takifugu rubripes ENSTRUG00000006935 I 0.918
ENSAMXG00000013008 Astyanax mexicanus ENSAMXG00000013008 I 0.912
ENSXMAG00000016421 Xiphophorus maculatus ENSXMAG00000016421 I 0.907
ENSAMXG00000001228 Astyanax mexicanus ENSAMXG00000001228 I 0.907
TC007409 Tribolium castaneum TC007409 I 0.906
ACYPI008177 Acyrthosiphon pisum ACYPI008177 I 0.901
PAX6 Equus caballus ENSECAG00000021000 I 0.901
ENSTRUG00000017375 Takifugu rubripes ENSTRUG00000017375 I 0.896
ACHR009845 Anopheles christyi ACHR009845 I 0.895
ACUA016154 Anopheles culicifacies ACUA016154 I 0.895
GF21877 Drosophila ananassae FBgn0098877 I 0.895
AALB006643 Anopheles albimanus AALB006643 I 0.895
ADIR000973 Anopheles dirus ADIR000973 I 0.895
GD24416 Drosophila simulans FBgn0195753 I 0.895
AATE014626 Anopheles atroparvus AATE014626 I 0.895
ASTEI06205 Anopheles stephensi ASTEI06205 I 0.895
AMIN002132 Anopheles minimus AMIN002132 I 0.895
AFUN011570 Anopheles funestus AFUN011570 I 0.895
ADAC001560 Anopheles darlingi ADAC001560 I 0.891
AMEM002691 Anopheles merus AMEM002691 I 0.890
AEPI005798 Anopheles epiroticus AEPI005798 I 0.890
AQUA008313 Anopheles quadriannulatus AQUA008313 I 0.890
AGAP000067 Anopheles gambiae AGAP000067 I 0.890
ENSGMOG00000019087 Gadus morhua ENSGMOG00000019087 I 0.890
AFAF017899 Anopheles farauti AFAF017899 I 0.890
AARA001110 Anopheles arabiensis AARA001110 I 0.890
AMEC013051 Anopheles melas AMEC013051 I 0.890
CPIJ006398 Culex quinquefasciatus CPIJ006398 I 0.889
L798_11483 Zootermopsis nevadensis L798_11483 I 0.889
TTRE_0000173501 Trichuris trichiura TTRE_0000173501 I 0.889
CpipJ_CPIJ006398 Culex pipiens CpipJ_CPIJ006398 I 0.889
ENSTNIG00000002471 Tetraodon nigroviridis ENSTNIG00000002471 I 0.879
GK13702 Drosophila willistoni FBgn0215710 I 0.874
ey Drosophila persimilis FBgn0043659 I 0.874
GF22818 Drosophila ananassae FBgn0099812 I 0.874
ey Drosophila pseudoobscura FBgn0018538 I 0.874
GI14081 Drosophila mojavensis FBgn0136835 I 0.874
SMAR013763 Strigamia maritima SMAR013763 I 0.874
TC008176 Tribolium castaneum TC008176 I 0.874
ey Drosophila virilis FBgn0028754 I 0.868
ACYPI067710 Acyrthosiphon pisum ACYPI067710 I 0.868
ey Drosophila sechellia FBgn0068720 I 0.868
GE14559 Drosophila yakuba FBgn0232158 I 0.868
GG16399 Drosophila erecta FBgn0108631 I 0.868
GB50342 Apis mellifera GB50342 I 0.868
NV15820 Nasonia vitripennis NV15820 I 0.868
PHUM097050 Pediculus humanus PHUM097050 I 0.866
DAPPUDRAFT_249978 Daphnia pulex DAPPUDRAFT_249978 I 0.863
CGI_10027695 Crassostrea gigas CGI_10027695 I 0.863
ISCW006352 Ixodes scapularis ISCW006352 I 0.860
DAPPUDRAFT_249991 Daphnia pulex DAPPUDRAFT_249991 I 0.857
ADAC003449 Anopheles darlingi ADAC003449 I 0.854
ACHR008920 Anopheles christyi ACHR008920 I 0.853
Cflo_00481--XP_394648.3_APIME Camponotus floridanus Cflo_00481--XP_394648.3_APIME I 0.852
Hsal_09597--XP_394648.3_APIME Harpegnathos saltator Hsal_09597--XP_394648.3_APIME I 0.852
GB41504 Apis mellifera GB41504 I 0.852
NV17076 Nasonia vitripennis NV17076 I 0.852
ISCW021772 Ixodes scapularis ISCW021772 I 0.851
AFAF009619 Anopheles farauti AFAF009619 I 0.848
GL17563 Drosophila persimilis FBgn0155166 I 0.846
GK13683 Drosophila willistoni FBgn0215691 I 0.846
GJ13300 Drosophila virilis FBgn0200526 I 0.846
GA27636 Drosophila pseudoobscura FBgn0249001 I 0.846
GI14042 Drosophila mojavensis FBgn0136796 I 0.846
GH23963 Drosophila grimshawi FBgn0131420 I 0.846
LotgiG133720 Lottia gigantea LotgiG133720 I 0.846
ENSCING00000006503 Ciona intestinalis ENSCING00000006503 I 0.846
ENSCSAVG00000007987 Ciona savignyi ENSCSAVG00000007987 I 0.846
ASIS012617 Anopheles sinensis ASIS012617 I 0.845
GE14563 Drosophila yakuba FBgn0232162 I 0.841
GG16402 Drosophila erecta FBgn0108634 I 0.841
csin101119 Clonorchis sinensis csin101119 I 0.841
toy Drosophila melanogaster FBgn0019650 D 0.841
GM13021 Drosophila sechellia FBgn0167952 I 0.841
PAX6 Ornithorhynchus anatinus ENSOANG00000015149 I 0.838
AAEL002321 Aedes aegypti AAEL002321 I 0.836
TMUE_s0038005250 Trichuris muris TMUE_s0038005250 I 0.835
Afo_R014630 Aptenodytes forsteri Afo_R014630 I 0.832
HelroG80374 Helobdella robusta HelroG80374 I 0.830
D918_01592 Trichuris suis D918_01592 I 0.830
PAX6 Pan troglodytes ENSPTRG00000003474 I 0.829
ENSTSYG00000011965 Tarsius syrichta ENSTSYG00000011965 I 0.819
SMU15027897 Schmidtea mediterranea SMU15027897 I 0.813
BXY_1643500 Bursaphelenchus xylophilus BXY_1643500 I 0.813
CpipJ_CPIJ006390 Culex pipiens CpipJ_CPIJ006390 I 0.813
CPIJ006390 Culex quinquefasciatus CPIJ006390 I 0.813
EFV57892 Trichinella spiralis EFV57892 I 0.813
Smp_170750 Schistosoma mansoni Smp_170750 I 0.813
ACUA021227 Anopheles culicifacies ACUA021227 I 0.813
D917_00854 Trichinella nativa D917_00854 I 0.812
csin110224 Clonorchis sinensis csin110224 I 0.802
AALB006354 Anopheles albimanus AALB006354 I 0.802
D915_07175 Fasciola hepatica D915_07175 I 0.801
AFUN011575 Anopheles funestus AFUN011575 I 0.797
AMEC021831 Anopheles melas AMEC021831 I 0.797
L596_g12356 Steinernema carpocapsae L596_g12356 I 0.797
AARA001115 Anopheles arabiensis AARA001115 I 0.797
AGAP000063 Anopheles gambiae AGAP000063 I 0.797
ASIS012967 Anopheles sinensis ASIS012967 I 0.797
AMIN002127 Anopheles minimus AMIN002127 I 0.797
L892_g3713 Steinernema scapterisci L892_g3713 I 0.797
AQUA008308 Anopheles quadriannulatus AQUA008308 I 0.797
ASTEI06200 Anopheles stephensi ASTEI06200 I 0.797
MCINX016249 Melitaea cinxia MCINX016249 I 0.795
ENSMEUG00000015900 Macropus eugenii ENSMEUG00000015900 I 0.793
ADIR000968 Anopheles dirus ADIR000968 I 0.792
RSKR_0000862000 Rhabditophanes kr3021 RSKR_0000862000 I 0.791
PAX6 Tursiops truncatus ENSTTRG00000002399 I 0.790
CBN04513 Caenorhabditis brenneri CBN04513 I 0.786
T265_09221 Opisthorchis viverrini T265_09221 I 0.786
CRE07226 Caenorhabditis remanei CRE07226 I 0.786
SMTD_0000837201 Schistosoma mattheei SMTD_0000837201 I 0.780
A_05170 Schistosoma haematobium A_05170 I 0.780
tetur09g00660 Tetranychus urticae tetur09g00660 I 0.780
PTRK_0000512100 Parastrongyloides trichosuri PTRK_0000512100 I 0.780
Smp_160670 Schistosoma mansoni Smp_160670 I 0.780
SSTP_0001059400 Strongyloides stercoralis SSTP_0001059400 I 0.775
SVE_0819200 Strongyloides venezuelensis SVE_0819200 I 0.775
SPAL_0001466800 Strongyloides papillosus SPAL_0001466800 I 0.775
vab-3 Caenorhabditis elegans WBGene00006870 I 0.769
AEPI005803 Anopheles epiroticus AEPI005803 I 0.758
T265_14971 Opisthorchis viverrini T265_14971 I 0.756
HelroG173449 Helobdella robusta HelroG173449 I 0.756
fgenesh2_pg.scaffold_199000043 Branchiostoma floridae fgenesh2_pg.scaffold_199000043 I 0.743
MCOS_0000220101 Mesocestoides corti MCOS_0000220101 I 0.742
Gfo_R001537 Geospiza fortis Gfo_R001537 I 0.737
ENSFALG00000010839 Ficedula albicollis ENSFALG00000010839 I 0.737
Aan_R006618 Calypte anna Aan_R006618 I 0.737
ENSAPLG00000004928 Anas platyrhynchos ENSAPLG00000004928 I 0.737
LLOJ005149 Lutzomyia longipalpis LLOJ005149 I 0.731
fgenesh2_pg.scaffold_23000118 Branchiostoma floridae fgenesh2_pg.scaffold_23000118 I 0.729
PAX2 Echinops telfairi ENSETEG00000014765 I 0.724
PAX2 Microcebus murinus ENSMICG00000001357 I 0.718
PAX2 Monodelphis domestica ENSMODG00000019353 I 0.718
PAX2 Macaca mulatta ENSMMUG00000009163 I 0.718
PAX2 Loxodonta africana ENSLAFG00000002388 I 0.718
ENSMEUG00000013247 Macropus eugenii ENSMEUG00000013247 I 0.718
PAX2 Equus caballus ENSECAG00000021123 I 0.718
PAX2 Callithrix jacchus ENSCJAG00000017397 I 0.718
ENSPPYG00000002572 Pongo abelii ENSPPYG00000002572 I 0.718
PAX2 Canis familiaris ENSCAFG00000009709 I 0.718
PAX2 Procavia capensis ENSPCAG00000006623 I 0.718
PAX2 Cavia porcellus ENSCPOG00000000939 I 0.718
ENSP00000359319-D1 Bos grunniens ENSP00000359319-D1 I 0.718
ENSPANG00000021132 Papio anubis ENSPANG00000021132 I 0.718
PAX2 Pan troglodytes ENSPTRG00000002853 I 0.718
PAX2 Pteropus vampyrus ENSPVAG00000002148 I 0.718
ENSAMEG00000017523 Ailuropoda melanoleuca ENSAMEG00000017523 I 0.718
PAX2 Tursiops truncatus ENSTTRG00000015106 I 0.718
PAX2 Sus scrofa ENSSSCG00000010556 I 0.718
ENSSHAG00000014328 Sarcophilus harrisii ENSSHAG00000014328 I 0.718
PAX2 Bos taurus ENSBTAG00000021566 I 0.718
Pax2 Rattus norvegicus ENSRNOG00000014253 I 0.718
ENSP00000359319 Macaca fascicularis ENSP00000359319 I 0.718
PAX2 Dasypus novemcinctus ENSDNOG00000013328 I 0.718
ENSFALG00000007308 Ficedula albicollis ENSFALG00000007308 I 0.718
PAX2 Oryctolagus cuniculus ENSOCUG00000012860 I 0.718
PAX2 Felis catus ENSFCAG00000011602 I 0.718
PAX2 Homo sapiens ENSG00000075891 D 0.718
ENSMPUG00000016955 Mustela putorius furo ENSMPUG00000016955 I 0.718
Pax2 Mus musculus ENSMUSG00000004231 D 0.718
PAX2 Gorilla gorilla ENSGGOG00000014908 I 0.718
PAX2 Otolemur garnettii ENSOGAG00000015274 I 0.718
PAX2 Erinaceus europaeus ENSEEUG00000001995 I 0.718
Myotis_brandtii_PAX2_10025650 Myotis brandtii Myotis_brandtii_PAX2_10025650 I 0.718
CAA04222 Xenopus laevis CAA04222 I 0.718
PAX2 Ochotona princeps ENSOPRG00000007096 I 0.718
pax2.L Xenopus laevis XB-GENE-486805 I 0.718
CAA71206 Xenopus laevis CAA71206 I 0.718
ENSLACG00000017470 Latimeria chalumnae ENSLACG00000017470 I 0.708
Pax2 Dipodomys ordii ENSDORG00000006193 I 0.706
TsM_000166900 Taenia solium TsM_000166900 I 0.703