GLYMA16G01370 (Glycine max)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GLYMA16G01370 T249126_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.838 0.714
ASIL1
M02264_2.00 		Arabidopsis thaliana
NNDHCGDHNN
NNDHCGDHNN		 PBM
Weirauch et al.(2014)
pTH7464 		0.818 0.571
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA16G01370.1 MADF 88 164

Links

Other MADF family TFs
Other Glycine max TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_029209 Theobroma cacao TCM_029209 I 0.951
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.936
29727.m000472 Ricinus communis 29727.m000472 I 0.936
AMTR_s00007p00263040 Amborella trichopoda AMTR_s00007p00263040 N 0.928
PK22475.1 Cannabis sativa PK22475.1 N 0.920
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.919
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.919
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.918
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.915
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.914
SapurV1A.0504s0110 Salix purpurea SapurV1A.0504s0110 N 0.908
POPTR_0001s06330 Populus trichocarpa POPTR_0001s06330 N 0.908
SapurV1A.2810s0010 Salix purpurea SapurV1A.2810s0010 N 0.908
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.891
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.890
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.890
Cla015773 Citrullus lanatus Cla015773 I 0.888
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.888
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.887
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.887
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.881
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.880
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.880
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.878
MDP0000255104 Malus domestica MDP0000255104 I 0.873
MDP0000281471 Malus domestica MDP0000281471 I 0.873
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.871
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.866
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.865
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.862
Pm013209 Prunus mume Pm013209 I 0.862
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.862
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.859
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.859
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.858
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.858
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.858
Bra014370 Brassica rapa Bra014370 I 0.856
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.854
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.846
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.843
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.843
Bo6g050870 Brassica oleracea Bo6g050870 I 0.842
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.840
Bo3g065930 Brassica oleracea Bo3g065930 I 0.839
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.838
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.838
ASIL2 Arabidopsis thaliana AT3G14180 D 0.838
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.838
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.838
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.838
Bo6g033010 Brassica oleracea Bo6g033010 I 0.834
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.833
Lus10020652.g Linum usitatissimum Lus10020652.g I 0.831
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.826
ASIL1 Arabidopsis thaliana AT1G54060 D 0.818
Bra037960 Brassica rapa Bra037960 I 0.814
Bo3g184450 Brassica oleracea Bo3g184450 I 0.814