MDP0000281471 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000281471 T250768_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.917 0.789
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000281471 MADF 217 294

Links

Other MADF family TFs
Other Malus domestica TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000255104 Malus domestica MDP0000255104 I 0.968
Pm013209 Prunus mume Pm013209 I 0.964
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.964
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.962
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.958
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.951
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.950
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.942
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.942
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.941
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.941
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.937
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.936
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.932
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.926
Cla015773 Citrullus lanatus Cla015773 I 0.926
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.924
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.917
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.917
ASIL2 Arabidopsis thaliana AT3G14180 D 0.917
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.917
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.917
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.917
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.917
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.917
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.914
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.913
29814.m000741 Ricinus communis 29814.m000741 I 0.912
cassava47424.m1 Manihot esculenta cassava47424.m1 I 0.911
29727.m000472 Ricinus communis 29727.m000472 I 0.911
cassava116.valid.m1 Manihot esculenta cassava116.valid.m1 I 0.911
TCM_029209 Theobroma cacao TCM_029209 I 0.909
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.908
MDP0000097759 Malus domestica MDP0000097759 N 0.908
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.908
PK22475.1 Cannabis sativa PK22475.1 N 0.907
Lus10020652.g Linum usitatissimum Lus10020652.g I 0.906
VIT_09s0002g00720 Vitis vinifera VIT_09s0002g00720 N 0.902
PGSC0003DMG400037972 Solanum tuberosum PGSC0003DMG400037972 I 0.901
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.901
MDP0000943251 Malus domestica MDP0000943251 N 0.897
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.897
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.897
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.896
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.892
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.886
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.879
TCM_042467 Theobroma cacao TCM_042467 N 0.877
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.873
GLYMA16G01370 Glycine max GLYMA16G01370 I 0.873
POPTR_0001s06330 Populus trichocarpa POPTR_0001s06330 N 0.870
SapurV1A.0504s0110 Salix purpurea SapurV1A.0504s0110 N 0.870
SapurV1A.2810s0010 Salix purpurea SapurV1A.2810s0010 N 0.870
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.869
Bostr.28625s0284 Boechera stricta Bostr.28625s0284 I 0.866
fgenesh1_pg.C_scaffold_3001317 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3001317 I 0.866
mgf006505m Mimulus guttatus mgf006505m I 0.863
Bo3g065930 Brassica oleracea Bo3g065930 I 0.861
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.847
Cagra.3631s0002 Capsella grandiflora Cagra.3631s0002 I 0.844
PRUPE_ppa010427mg Prunus persica PRUPE_ppa010427mg I 0.837
Bostr.7128s0077 Boechera stricta Bostr.7128s0077 I 0.835
ASIL1 Arabidopsis lyrata fgenesh2_kg.1__4489__AT1G54060.1 I 0.835
VIT_13s0067g01440 Vitis vinifera VIT_13s0067g01440 N 0.832
AMTR_s00007p00263040 Amborella trichopoda AMTR_s00007p00263040 N 0.831
Carubv10015798m.g Capsella rubella Carubv10015798m.g I 0.828
Bra014370 Brassica rapa Bra014370 I 0.827
Thhalv10011582m.g Eutrema salsugineum Thhalv10011582m.g I 0.821
Carubv10009310m.g Capsella rubella Carubv10009310m.g I 0.819
Cagra.0769s0020 Capsella grandiflora Cagra.0769s0020 I 0.819
AMTR_s00021p00065350 Amborella trichopoda AMTR_s00021p00065350 I 0.816
Bo1g134590 Brassica oleracea Bo1g134590 I 0.812