29814.m000741 (Ricinus communis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 29814.m000741 T250443_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.841 0.632
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29814.m000741 MADF 33 107

Links

Other MADF family TFs
Other Ricinus communis TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.971
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.967
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I 0.964
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I 0.964
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.952
MDP0000097759 Malus domestica MDP0000097759 N 0.943
Solyc06g051120.2 Solanum lycopersicum Solyc06g051120.2 I 0.941
PGSC0003DMG400030023 Solanum tuberosum PGSC0003DMG400030023 I 0.941
evm.TU.supercontig_19.152 Carica papaya evm.TU.supercontig_19.152 I 0.938
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I 0.936
MDP0000943251 Malus domestica MDP0000943251 N 0.935
TCM_042467 Theobroma cacao TCM_042467 N 0.931
gene21007-v1.0-hybrid Fragaria vesca gene21007-v1.0-hybrid N 0.923
MDP0000281471 Malus domestica MDP0000281471 I 0.912
mgf006505m Mimulus guttatus mgf006505m I 0.904
MDP0000255104 Malus domestica MDP0000255104 I 0.902
Pm013209 Prunus mume Pm013209 I 0.902
gene05400-v1.0-hybrid Fragaria vesca gene05400-v1.0-hybrid I 0.902
PRUPE_ppa023115mg Prunus persica PRUPE_ppa023115mg I 0.902
AMTR_s00007p00020440 Amborella trichopoda AMTR_s00007p00020440 I 0.900
PRUPE_ppa010427mg Prunus persica PRUPE_ppa010427mg I 0.899
Thhalv10021383m.g Eutrema salsugineum Thhalv10021383m.g I 0.897
Bo5g136850 Brassica oleracea Bo5g136850 I 0.897
Bostr.19424s1046 Boechera stricta Bostr.19424s1046 I 0.897
AT3G11100 Arabidopsis thaliana AT3G11100 I 0.897
scaffold_301280.1 Arabidopsis lyrata scaffold_301280.1 I 0.897
VIT_13s0067g01440 Vitis vinifera VIT_13s0067g01440 N 0.894
POPTR_0003s19840 Populus trichocarpa POPTR_0003s19840 I 0.893
Bra034165 Brassica rapa Bra034165 I 0.890
SapurV1A.0009s0880 Salix purpurea SapurV1A.0009s0880 I 0.887
Aquca_021_00219 Aquilegia coerulea Aquca_021_00219 I 0.882
Carubv10014421m.g Capsella rubella Carubv10014421m.g I 0.880
LjSGA_010694.1 Lotus japonicus LjSGA_010694.1 I 0.877
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.876
GSMUA_Achr8G23650_001 Musa acuminata GSMUA_Achr8G23650_001 I 0.875
mgf001239m Mimulus guttatus mgf001239m N 0.873
MTR_8g022290 Medicago truncatula MTR_8g022290 I 0.870
GSMUA_Achr3G05880_001 Musa acuminata GSMUA_Achr3G05880_001 I 0.865
Bra034866 Brassica rapa Bra034866 I 0.864
mgf000047m Mimulus guttatus mgf000047m I 0.863
Bo9g177060 Brassica oleracea Bo9g177060 I 0.857
Cla015773 Citrullus lanatus Cla015773 I 0.855
Cucsa.359990 Cucumis sativus Cucsa.359990 I 0.855
Gorai.009G144800 Gossypium raimondii Gorai.009G144800 I 0.855
cassava34877.m1 Manihot esculenta cassava34877.m1 I 0.855
Gorai.010G235700 Gossypium raimondii Gorai.010G235700 I 0.855
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.854
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.854
Ciclev10026005m.g Citrus clementina Ciclev10026005m.g I 0.854
orange1.1g019413m.g Citrus sinensis orange1.1g019413m.g I 0.854
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.850
PK20477.1 Cannabis sativa PK20477.1 N 0.850
Carubv10001830m.g Capsella rubella Carubv10001830m.g I 0.850
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.848
Ca_02494 Cicer arietinum Ca_02494 N 0.848
29900.m001628 Ricinus communis 29900.m001628 I 0.843
Aquca_020_00550 Aquilegia coerulea Aquca_020_00550 I 0.843
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.843
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.843
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.843
Bostr.28625s0287 Boechera stricta Bostr.28625s0287 I 0.841
Thhalv10020691m.g Eutrema salsugineum Thhalv10020691m.g I 0.841
fgenesh2_kg.3__1533__AT3G14180.1 Arabidopsis lyrata fgenesh2_kg.3__1533__AT3G14180.1 I 0.841
Carubv10015321m.g Capsella rubella Carubv10015321m.g I 0.841
ASIL2 Arabidopsis thaliana AT3G14180 D 0.841
Cagra.3631s0005 Capsella grandiflora Cagra.3631s0005 I 0.841
GLYMA07G04790 Glycine max GLYMA07G04790 I 0.840
PGSC0003DMG400010197 Solanum tuberosum PGSC0003DMG400010197 I 0.839
Solyc02g076810.2 Solanum lycopersicum Solyc02g076810.2 I 0.839
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.838
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.837
Bra009119 Brassica rapa Bra009119 I 0.833
Ca_19877 Cicer arietinum Ca_19877 I 0.832
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N 0.831
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.830
Solyc03g122030.1 Solanum lycopersicum Solyc03g122030.1 I 0.829
Lus10020652.g Linum usitatissimum Lus10020652.g I 0.828
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.826
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.825
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.824
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.820
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.820
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.820
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.820
OBART05G25610 Oryza barthii OBART05G25610 I 0.820
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.820
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.820
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.820
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.820
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.820
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.820
OS05G0560600 Oryza sativa OS05G0560600 I 0.820
Si022565m.g Setaria italica Si022565m.g I 0.820
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.820
Aquca_039_00151 Aquilegia coerulea Aquca_039_00151 N 0.819
Bostr.13129s0416 Boechera stricta Bostr.13129s0416 I 0.818
TCM_029695 Theobroma cacao TCM_029695 I 0.817
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.817
Ca_00394 Cicer arietinum Ca_00394 I 0.817
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.817
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.817
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.817
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.817
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.817
POPTR_0003s11850 Populus trichocarpa POPTR_0003s11850 I 0.816
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.816
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I 0.816
Si010246m.g Setaria italica Si010246m.g N 0.816
GRMZM2G392168 Zea mays GRMZM2G392168 N 0.815
Cagra.1504s0056 Capsella grandiflora Cagra.1504s0056 I 0.813