MYB25 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT2G39880 T266407_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
putative transcription factor MYB109 (MYB109) mRNA

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.690 0.720
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.680 0.699
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW

WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.680 0.699
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH

DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.680 0.699
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.675 0.731
AtMYB70
M01071_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH8588
0.666 0.677
PK28565.1
M02357_2.00
Cannabis sativa
TAACBGTY

RACVGTTA
PBM
Weirauch et al.(2014)
pTH9653
0.666 0.677
AtMYB70
M07048_2.00
Arabidopsis thaliana
YAACBGWHWWAAMN

NKTTWWDWCVGTTR
Dap-seq
OMalley et al.(2016)
MYB70_col_a
0.666 0.677
MYB73
M07114_2.00
Arabidopsis thaliana
TAACBGWHWHW

WDWDWCVGTTA
Dap-seq
OMalley et al.(2016)
MYB73_col_a
0.661 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G39880.1 Myb 50 96
AT2G39880.1 Myb 102 147

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bostr.23794s0078 Boechera stricta Bostr.23794s0078 I 0.849
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I 0.836
Carubv10023414m.g Capsella rubella Carubv10023414m.g I 0.831
Cagra.10445s0001 Capsella grandiflora Cagra.10445s0001 I 0.831
Thhalv10016794m.g Eutrema salsugineum Thhalv10016794m.g I 0.774
Bo4g025810 Brassica oleracea Bo4g025810 I 0.770
Bra005006 Brassica rapa Bra005006 I 0.765
MYB109 Arabidopsis thaliana AT3G55730 I 0.761
Bra007186 Brassica rapa Bra007186 I 0.760
Bo8g090160 Brassica oleracea Bo8g090160 I 0.751
Thhalv10010431m.g Eutrema salsugineum Thhalv10010431m.g I 0.742
Bostr.20505s0177 Boechera stricta Bostr.20505s0177 I 0.742
mgf020432m Mimulus guttatus mgf020432m I 0.741
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.734
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.732
Cla004431 Citrullus lanatus Cla004431 I 0.731
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.729
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.728
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.727
MDP0000319124 Malus domestica MDP0000319124 I 0.727
MDP0000203733 Malus domestica MDP0000203733 I 0.727
TCM_021796 Theobroma cacao TCM_021796 I 0.727
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I 0.724
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I 0.724
29814.m000736 Ricinus communis 29814.m000736 I 0.724
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I 0.724
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.722
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.722
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.722
LPERR01G32110 Leersia perrieri LPERR01G32110 I 0.720
OB01G46120 Oryza brachyantha OB01G46120 I 0.720
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I 0.719
30170.m013698 Ricinus communis 30170.m013698 I 0.718
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.717
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I 0.717
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.717
GLYMA04G04490 Glycine max GLYMA04G04490 I 0.716
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.715
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.715
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.715
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.715
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.715
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.715
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.715
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.715
PK17282.1 Cannabis sativa PK17282.1 I 0.715
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.715
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.715
MDP0000463846 Malus domestica MDP0000463846 I 0.715
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.715
Pm005332 Prunus mume Pm005332 I 0.715
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.715
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.715
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.715
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.715
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.715
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.714
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.714
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.714
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I 0.714
MDP0000275800 Malus domestica MDP0000275800 I 0.711
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.710
PK01153.1 Cannabis sativa PK01153.1 I 0.708
MYB109 Arabidopsis lyrata fgenesh2_kg.5__1999__AT3G55730.1 I 0.708
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.707
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.706
Bo7g117880 Brassica oleracea Bo7g117880 I 0.706
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.704
BRADI2G55040 Brachypodium distachyon BRADI2G55040 I 0.704
mgf018580m Mimulus guttatus mgf018580m I 0.704
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.704
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.704
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.704
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.703
27798.m000612 Ricinus communis 27798.m000612 I 0.702
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.702
Cla018417 Citrullus lanatus Cla018417 I 0.702
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.701
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.701
Cucsa.073130 Cucumis sativus Cucsa.073130 I 0.701
Cla006872 Citrullus lanatus Cla006872 I 0.701
evm.TU.supercontig_56.79 Carica papaya evm.TU.supercontig_56.79 I 0.700
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.700
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.700
Ca_02182 Cicer arietinum Ca_02182 I 0.699
e_gw1.3.530.1 Coccomyxa subellipsoidea C169 e_gw1.3.530.1 N 0.699
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.699
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.699
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I 0.699
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.699
MTR_5g016510 Medicago truncatula MTR_5g016510 I 0.699
GLYMA01G39740 Glycine max GLYMA01G39740 I 0.699
GLYMA11G05550 Glycine max GLYMA11G05550 I 0.699
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.699
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.699
e_gw1.3.545.1 Chlorella vulgaris e_gw1.3.545.1 N 0.699
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.699
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.699
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.697
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.697
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.697
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.697
Pm002576 Prunus mume Pm002576 I 0.697
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I 0.697
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.696
TCM_042629 Theobroma cacao TCM_042629 I 0.696
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.695
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.695
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I 0.694
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.694
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.694
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.694
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I 0.693
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.692
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.692
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I 0.691
Cla022947 Citrullus lanatus Cla022947 I 0.690
Cla020946 Citrullus lanatus Cla020946 I 0.690
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.690
Cucsa.395890 Cucumis sativus Cucsa.395890 I 0.690
29970.m000987 Ricinus communis 29970.m000987 I 0.690
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.690
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.690
OLONG_001357 Oryza longistaminata OLONG_001357 I 0.690
ONIVA01G42300 Oryza nivara ONIVA01G42300 I 0.690
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.690
Bostr.22252s0145 Boechera stricta Bostr.22252s0145 I 0.690
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.690
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.690
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.690
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.690
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.690
OBART01G37390 Oryza barthii OBART01G37390 I 0.690
OGLUM01G41330 Oryza glumaepatula OGLUM01G41330 I 0.690
OPUNC01G36300 Oryza punctata OPUNC01G36300 I 0.690
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.690
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.690
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.690
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.690
BGIOSGA000485 Oryza indica BGIOSGA000485 I 0.690
Si017917m.g Setaria italica Si017917m.g I 0.690
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.690
OS02G0187700 Oryza sativa OS02G0187700 D 0.690
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.690
ORGLA01G0312200 Oryza glaberrima ORGLA01G0312200 I 0.690
ORUFI01G40770 Oryza rufipogon ORUFI01G40770 I 0.690
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.690
OS01G0850400 Oryza sativa OS01G0850400 I 0.690
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.690
mgf015566m Mimulus guttatus mgf015566m I 0.689
VIT_13s0019g03200 Vitis vinifera VIT_13s0019g03200 I 0.689
Ca_12468 Cicer arietinum Ca_12468 I 0.689
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.689
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.688
Cla014191 Citrullus lanatus Cla014191 I 0.688
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.688
OMERI01G34370 Oryza meridionalis OMERI01G34370 I 0.687
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.687
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.687
mgf023922m Mimulus guttatus mgf023922m I 0.685
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.684
MDP0000478512 Malus domestica MDP0000478512 I 0.683
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I 0.683
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.682
GRMZM2G169316 Zea mays GRMZM2G169316 I 0.682
Pavir.J13677 Panicum virgatum Pavir.J13677 I 0.682
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I 0.682
Sb03g039950 Sorghum bicolor Sb03g039950 I 0.682
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I 0.681
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.681
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.680
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.680
Bra012149 Brassica rapa Bra012149 I 0.680
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.680
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.680
MYB44 Arabidopsis thaliana AT5G67300 D 0.680
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.680
Bo7g063830 Brassica oleracea Bo7g063830 I 0.680
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.679
Pm018951 Prunus mume Pm018951 I 0.679
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I 0.679
Carubv10017397m.g Capsella rubella Carubv10017397m.g I 0.678
Cagra.0003s0013 Capsella grandiflora Cagra.0003s0013 I 0.678
Eucgr.J00189 Eucalyptus grandis Eucgr.J00189 I 0.677
MDP0000298689 Malus domestica MDP0000298689 I 0.676
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.676
Bra034057 Brassica rapa Bra034057 I 0.676
PK07741.1 Cannabis sativa PK07741.1 D 0.675
TCM_042474 Theobroma cacao TCM_042474 I 0.675
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.675
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.675
Lus10030336.g Linum usitatissimum Lus10030336.g I 0.675
AMTR_s00006p00225600 Amborella trichopoda AMTR_s00006p00225600 I 0.675
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.675
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.675
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.674
Si032789m.g Setaria italica Si032789m.g I 0.674
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.674
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.674
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.674
Pm018862 Prunus mume Pm018862 I 0.673
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.672
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.672
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I 0.671
Bo2g167960 Brassica oleracea Bo2g167960 I 0.671
MDP0000284922 Malus domestica MDP0000284922 I 0.671
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.670
Bra001323 Brassica rapa Bra001323 I 0.670
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.670
Bra032176 Brassica rapa Bra032176 I 0.670
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.670
Bo3g153550 Brassica oleracea Bo3g153550 I 0.670
Bra010593 Brassica rapa Bra010593 I 0.670
OB09G10200 Oryza brachyantha OB09G10200 I 0.670
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.670
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.670
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.670
OS09G0106700 Oryza sativa OS09G0106700 I 0.670
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I 0.670
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I 0.670
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.670
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.670
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.670
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.670
OBART09G00310 Oryza barthii OBART09G00310 I 0.670
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.670
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.670
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.669
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.669
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.669
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.669
Bo7g118450 Brassica oleracea Bo7g118450 I 0.667
MDP0000196986 Malus domestica MDP0000196986 I 0.666
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.666
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.666
PK28565.1 Cannabis sativa PK28565.1 D 0.666
TCM_000696 Theobroma cacao TCM_000696 I 0.666
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.666
mgf014089m Mimulus guttatus mgf014089m I 0.666
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.666
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.666
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.666
Lus10010260.g Linum usitatissimum Lus10010260.g I 0.666
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.666
MDP0000232454 Malus domestica MDP0000232454 I 0.666
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.666
SapurV1A.0708s0130 Salix purpurea SapurV1A.0708s0130 I 0.665
TCM_007138 Theobroma cacao TCM_007138 I 0.664
Bo1g144680 Brassica oleracea Bo1g144680 I 0.664
cassava46434.m1 Manihot esculenta cassava46434.m1 I 0.664
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.662
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.661
MYB73 Arabidopsis thaliana AT4G37260 D 0.661
Bo1g004900 Brassica oleracea Bo1g004900 I 0.661
Bra011749 Brassica rapa Bra011749 I 0.661
Carubv10007638m.g Capsella rubella Carubv10007638m.g I 0.661
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.661
Gorai.009G276400 Gossypium raimondii Gorai.009G276400 I 0.661
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I 0.661
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I 0.661
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.661
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.661
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.661
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I 0.661