CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc09g011780.2
(
Solanum lycopersicum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Solyc09g011780.2
T280231_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.801
0.914
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.743
0.785
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN
NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.729
0.785
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc09g011780.2.1
Myb
67
113
KGPWSPEEDAILSRLVSNFGARNWSLIARGIPGRSGKSCRLRWCNQL
Solyc09g011780.2.1
Myb
119
164
RKPFTDEEDRIILQAHAIHGNKWASIARLLPGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Solanum lycopersicum
TFs
260 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400020338
Solanum tuberosum
PGSC0003DMG400020338
I
0.909
GSMUA_Achr6G33470_001
Musa acuminata
GSMUA_Achr6G33470_001
I
0.856
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.856
mgf018580m
Mimulus guttatus
mgf018580m
I
0.848
MDP0000284922
Malus domestica
MDP0000284922
I
0.847
TCM_042629
Theobroma cacao
TCM_042629
I
0.847
Gorai.011G278500
Gossypium raimondii
Gorai.011G278500
I
0.847
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.839
VIT_08s0007g01540
Vitis vinifera
VIT_08s0007g01540
I
0.836
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.832
GSMUA_Achr5G28780_001
Musa acuminata
GSMUA_Achr5G28780_001
I
0.830
MDP0000807341
Malus domestica
MDP0000807341
I
0.830
PK12959.1
Cannabis sativa
PK12959.1
I
0.827
Cla018417
Citrullus lanatus
Cla018417
I
0.826
Cucsa.066910
Cucumis sativus
Cucsa.066910
I
0.826
27798.m000612
Ricinus communis
27798.m000612
I
0.826
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.820
MDP0000478512
Malus domestica
MDP0000478512
I
0.817
Pm018862
Prunus mume
Pm018862
I
0.815
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.814
Eucgr.K03010
Eucalyptus grandis
Eucgr.K03010
I
0.812
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.809
mgf015566m
Mimulus guttatus
mgf015566m
I
0.808
MDP0000319124
Malus domestica
MDP0000319124
I
0.807
MDP0000203733
Malus domestica
MDP0000203733
I
0.807
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.806
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.806
Gorai.006G179700
Gossypium raimondii
Gorai.006G179700
I
0.802
GSMUA_Achr9G03720_001
Musa acuminata
GSMUA_Achr9G03720_001
I
0.801
PK07741.1
Cannabis sativa
PK07741.1
D
0.801
Lus10040239.g
Linum usitatissimum
Lus10040239.g
I
0.798
Lus10028250.g
Linum usitatissimum
Lus10028250.g
I
0.798
PGSC0003DMG400027190
Solanum tuberosum
PGSC0003DMG400027190
I
0.797
cassava7558.valid.m1
Manihot esculenta
cassava7558.valid.m1
I
0.796
Eucgr.J00250
Eucalyptus grandis
Eucgr.J00250
I
0.795
Pm002576
Prunus mume
Pm002576
I
0.793
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
0.790
e_gw1.53.214.1
Physcomitrella patens
e_gw1.53.214.1
I
0.789
e_gw1.72.10.1
Physcomitrella patens
e_gw1.72.10.1
I
0.789
GLYMA02G42030
Glycine max
GLYMA02G42030
I
0.786
Ciclev10012003m.g
Citrus clementina
Ciclev10012003m.g
I
0.785
orange1.1g017566m.g
Citrus sinensis
orange1.1g017566m.g
I
0.785
Si001686m.g
Setaria italica
Si001686m.g
I
0.784
PRUPE_ppa006851mg
Prunus persica
PRUPE_ppa006851mg
I
0.784
TCM_021796
Theobroma cacao
TCM_021796
I
0.784
SapurV1A.0709s0060
Salix purpurea
SapurV1A.0709s0060
I
0.784
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.783
Solyc05g052850.2
Solanum lycopersicum
Solyc05g052850.2
I
0.782
SapurV1A.0262s0270
Salix purpurea
SapurV1A.0262s0270
I
0.782
Aquca_009_00809
Aquilegia coerulea
Aquca_009_00809
I
0.781
Carubv10017397m.g
Capsella rubella
Carubv10017397m.g
I
0.774
Cagra.0003s0013
Capsella grandiflora
Cagra.0003s0013
I
0.774
evm.TU.supercontig_56.79
Carica papaya
evm.TU.supercontig_56.79
I
0.773
MLOC_10322
Hordeum vulgare
MLOC_10322
I
0.767
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
0.767
gene20888-v1.0-hybrid
Fragaria vesca
gene20888-v1.0-hybrid
I
0.765
Pavir.Ea03398
Panicum virgatum
Pavir.Ea03398
I
0.763
Pavir.J13677
Panicum virgatum
Pavir.J13677
I
0.763
Thhalv10021963m.g
Eutrema salsugineum
Thhalv10021963m.g
I
0.763
GRMZM2G169316
Zea mays
GRMZM2G169316
I
0.763
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.758
Cagra.2515s0014
Capsella grandiflora
Cagra.2515s0014
I
0.754
Sb03g039950
Sorghum bicolor
Sb03g039950
I
0.754
Carubv10013882m.g
Capsella rubella
Carubv10013882m.g
I
0.754
VIT_13s0019g03200
Vitis vinifera
VIT_13s0019g03200
I
0.754
gene18756-v1.0-hybrid
Fragaria vesca
gene18756-v1.0-hybrid
I
0.752
Bra007186
Brassica rapa
Bra007186
I
0.749
Bostr.20505s0177
Boechera stricta
Bostr.20505s0177
I
0.749
Thhalv10010431m.g
Eutrema salsugineum
Thhalv10010431m.g
I
0.749
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.748
SELMODRAFT_113522
Selaginella moellendorffii
SELMODRAFT_113522
I
0.746
SELMODRAFT_77255
Selaginella moellendorffii
SELMODRAFT_77255
I
0.746
MYB109
Arabidopsis lyrata
fgenesh2_kg.5__1999__AT3G55730.1
I
0.744
MYB1
Arabidopsis thaliana
AT3G09230
D
0.743
Bo8g090160
Brassica oleracea
Bo8g090160
I
0.740
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.740
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.738
Ca_12468
Cicer arietinum
Ca_12468
I
0.737
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.736
PK16550.1
Cannabis sativa
PK16550.1
I
0.735
OPUNC01G36300
Oryza punctata
OPUNC01G36300
I
0.733
BGIOSGA000485
Oryza indica
BGIOSGA000485
I
0.733
OLONG_001357
Oryza longistaminata
OLONG_001357
I
0.733
OBART01G37390
Oryza barthii
OBART01G37390
I
0.733
OGLUM01G41330
Oryza glumaepatula
OGLUM01G41330
I
0.733
ORGLA01G0312200
Oryza glaberrima
ORGLA01G0312200
I
0.733
OS01G0850400
Oryza sativa
OS01G0850400
I
0.733
ORUFI01G40770
Oryza rufipogon
ORUFI01G40770
I
0.733
AtMYB1
Arabidopsis lyrata
scaffold_301043.1
I
0.733
OMERI01G34370
Oryza meridionalis
OMERI01G34370
I
0.733
ONIVA01G42300
Oryza nivara
ONIVA01G42300
I
0.733
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.729
Si017917m.g
Setaria italica
Si017917m.g
I
0.729
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.729
Cla013306
Citrullus lanatus
Cla013306
I
0.729
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
0.729
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.729
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
0.729
MLOC_7426
Hordeum vulgare
MLOC_7426
I
0.729
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
0.729
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
0.729
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
0.729
OS02G0187700
Oryza sativa
OS02G0187700
D
0.729
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
0.729
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.729
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
0.729
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.729
29801.m003096
Ricinus communis
29801.m003096
I
0.728
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.728
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.728
Bo3g062160
Brassica oleracea
Bo3g062160
I
0.721
Cucsa.244650
Cucumis sativus
Cucsa.244650
I
0.720
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.719
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.719
Bostr.23794s0078
Boechera stricta
Bostr.23794s0078
I
0.719
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.718
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.717
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.717
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.717
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.717
Si032789m.g
Setaria italica
Si032789m.g
I
0.717
PRUPE_ppa023154mg
Prunus persica
PRUPE_ppa023154mg
I
0.714
VIT_03s0180g00210
Vitis vinifera
VIT_03s0180g00210
I
0.714
Pm021211
Prunus mume
Pm021211
I
0.714
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.713
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.713
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
0.713
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.713
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.713
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.713
OBART09G00310
Oryza barthii
OBART09G00310
I
0.713
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.713
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.713
OB09G10200
Oryza brachyantha
OB09G10200
I
0.713
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.713
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.713
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.713
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.713
OS09G0106700
Oryza sativa
OS09G0106700
I
0.713
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.713
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.713
LPERR01G32110
Leersia perrieri
LPERR01G32110
I
0.712
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
0.712
Bostr.22252s0145
Boechera stricta
Bostr.22252s0145
I
0.710
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.710
MYB109
Arabidopsis thaliana
AT3G55730
I
0.709
Carubv10023414m.g
Capsella rubella
Carubv10023414m.g
I
0.708
Cagra.10445s0001
Capsella grandiflora
Cagra.10445s0001
I
0.708
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
0.707
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.707
PK29071.1
Cannabis sativa
PK29071.1
I
0.707
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
0.707
Cla022889
Citrullus lanatus
Cla022889
I
0.707
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
0.704
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.704
TCM_033907
Theobroma cacao
TCM_033907
I
0.703
OB01G46120
Oryza brachyantha
OB01G46120
I
0.703
orange1.1g046570m.g
Citrus sinensis
orange1.1g046570m.g
I
0.703
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
0.703
Ciclev10032317m.g
Citrus clementina
Ciclev10032317m.g
I
0.703
mgf006151m
Mimulus guttatus
mgf006151m
I
0.703
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
0.703
orange1.1g022144m.g
Citrus sinensis
orange1.1g022144m.g
I
0.699
Ciclev10001979m.g
Citrus clementina
Ciclev10001979m.g
I
0.699
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
0.699
SapurV1A.0650s0070
Salix purpurea
SapurV1A.0650s0070
I
0.698
chr2.CM0002.110.nc
Lotus japonicus
chr2.CM0002.110.nc
I
0.698
BRADI2G55040
Brachypodium distachyon
BRADI2G55040
I
0.697
MDP0000463846
Malus domestica
MDP0000463846
I
0.696
cassava47374.m1
Manihot esculenta
cassava47374.m1
I
0.696
Cla020946
Citrullus lanatus
Cla020946
I
0.696
PRUPE_ppa008979mg
Prunus persica
PRUPE_ppa008979mg
I
0.696
PK17282.1
Cannabis sativa
PK17282.1
I
0.696
30170.m013698
Ricinus communis
30170.m013698
I
0.696
evm.TU.supercontig_21.145
Carica papaya
evm.TU.supercontig_21.145
I
0.696
Cucsa.352560
Cucumis sativus
Cucsa.352560
I
0.696
Pm005332
Prunus mume
Pm005332
I
0.696
Bra005006
Brassica rapa
Bra005006
I
0.696
mgf025567m
Mimulus guttatus
mgf025567m
I
0.695
Thhalv10016794m.g
Eutrema salsugineum
Thhalv10016794m.g
I
0.695
MDP0000298689
Malus domestica
MDP0000298689
I
0.694
evm.TU.supercontig_19.155
Carica papaya
evm.TU.supercontig_19.155
I
0.694
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
0.694
MYB25
Arabidopsis lyrata
Al_scaffold_0004_2572
I
0.694
MDP0000187872
Malus domestica
MDP0000187872
I
0.693
Lus10014103.g
Linum usitatissimum
Lus10014103.g
I
0.692
MYB25
Arabidopsis thaliana
AT2G39880
I
0.692
Bo4g025810
Brassica oleracea
Bo4g025810
I
0.691
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
0.691
gene21001-v1.0-hybrid
Fragaria vesca
gene21001-v1.0-hybrid
I
0.688
Pm018951
Prunus mume
Pm018951
I
0.688
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.688
29814.m000736
Ricinus communis
29814.m000736
I
0.688
MTR_6g015455
Medicago truncatula
MTR_6g015455
I
0.688
PRUPE_ppa017892mg
Prunus persica
PRUPE_ppa017892mg
I
0.688
GRMZM2G078820
Zea mays
GRMZM2G078820
I
0.687
GSMUA_Achr1G09750_001
Musa acuminata
GSMUA_Achr1G09750_001
I
0.685
Gorai.005G234900
Gossypium raimondii
Gorai.005G234900
I
0.684
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
0.683
Pavir.Da00404
Panicum virgatum
Pavir.Da00404
I
0.683
mgf020432m
Mimulus guttatus
mgf020432m
I
0.683
Pavir.Db00693
Panicum virgatum
Pavir.Db00693
I
0.683
Si006938m.g
Setaria italica
Si006938m.g
I
0.683
Sb10g024950
Sorghum bicolor
Sb10g024950
I
0.683
GRMZM5G803308
Zea mays
GRMZM5G803308
I
0.683
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.682
Bo7g117880
Brassica oleracea
Bo7g117880
I
0.682
Bra034057
Brassica rapa
Bra034057
I
0.682
Cla004431
Citrullus lanatus
Cla004431
I
0.681
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
0.680
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
0.679
VIT_13s0067g01360
Vitis vinifera
VIT_13s0067g01360
I
0.679
MTR_4g094982
Medicago truncatula
MTR_4g094982
I
0.679
Gorai.010G016800
Gossypium raimondii
Gorai.010G016800
I
0.678
TRIUR3_08319
Triticum urartu
TRIUR3_08319
I
0.677
Bra001323
Brassica rapa
Bra001323
I
0.676
Cucsa.368410
Cucumis sativus
Cucsa.368410
I
0.675
mgf003084m
Mimulus guttatus
mgf003084m
I
0.675
Eucgr.H02226
Eucalyptus grandis
Eucgr.H02226
I
0.675
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
0.674
POPTR_0009s09890
Populus trichocarpa
POPTR_0009s09890
I
0.672
Bo1g144680
Brassica oleracea
Bo1g144680
I
0.671
GLYMA04G04490
Glycine max
GLYMA04G04490
I
0.670
TCM_042474
Theobroma cacao
TCM_042474
I
0.669
SapurV1A.0708s0130
Salix purpurea
SapurV1A.0708s0130
I
0.668
estExt_fgenesh4_pg.C_10375
Volvox carteri
estExt_fgenesh4_pg.C_10375
I
0.667
TRIUR3_25447
Triticum urartu
TRIUR3_25447
I
0.667
Traes_7DL_1FA87027B
Triticum aestivum
Traes_7DL_1FA87027B
I
0.667
MLOC_63964
Hordeum vulgare
MLOC_63964
I
0.667
MLOC_64963
Hordeum vulgare
MLOC_64963
I
0.667
VIT_18s0001g11170
Vitis vinifera
VIT_18s0001g11170
I
0.667
OPUNC06G19910
Oryza punctata
OPUNC06G19910
I
0.666
ONIVA06G26080
Oryza nivara
ONIVA06G26080
I
0.666
SapurV1A.0919s0160
Salix purpurea
SapurV1A.0919s0160
I
0.666
OGLUM06G23260
Oryza glumaepatula
OGLUM06G23260
I
0.666
OMERI06G22090
Oryza meridionalis
OMERI06G22090
I
0.666
ORUFI06G23790
Oryza rufipogon
ORUFI06G23790
I
0.666
SapurV1A.0597s0060
Salix purpurea
SapurV1A.0597s0060
I
0.666
SapurV1A.1934s0020
Salix purpurea
SapurV1A.1934s0020
I
0.666
POPTR_0002s12410
Populus trichocarpa
POPTR_0002s12410
I
0.666
OS06G0637500
Oryza sativa
OS06G0637500
I
0.666
POPTR_0014s02260
Populus trichocarpa
POPTR_0014s02260
I
0.666
ORGLA06G0184100
Oryza glaberrima
ORGLA06G0184100
I
0.666
LPERR06G18380
Leersia perrieri
LPERR06G18380
I
0.666
Cla022947
Citrullus lanatus
Cla022947
I
0.666
Cucsa.395890
Cucumis sativus
Cucsa.395890
I
0.666
SapurV1A.0167s0310
Salix purpurea
SapurV1A.0167s0310
I
0.666
BGIOSGA020819
Oryza indica
BGIOSGA020819
I
0.666
Lus10010238.g
Linum usitatissimum
Lus10010238.g
I
0.664
mgf023922m
Mimulus guttatus
mgf023922m
I
0.663
Gorai.009G208900
Gossypium raimondii
Gorai.009G208900
I
0.662
Ciclev10002239m.g
Citrus clementina
Ciclev10002239m.g
I
0.662
30170.m013927
Ricinus communis
30170.m013927
I
0.662
evm.TU.supercontig_376.4
Carica papaya
evm.TU.supercontig_376.4
I
0.662
orange1.1g025351m.g
Citrus sinensis
orange1.1g025351m.g
I
0.662
MDP0000275800
Malus domestica
MDP0000275800
I
0.662
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.662
SapurV1A.0017s0390
Salix purpurea
SapurV1A.0017s0390
I
0.662
CHLREDRAFT_116056
Chlamydomonas reinhardtii
CHLREDRAFT_116056
I
0.661
gene00185-v1.0-hybrid
Fragaria vesca
gene00185-v1.0-hybrid
I
0.661