Gorai.010G016800 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.010G016800 T287735_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.716 0.763
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH

DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.711 0.720
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.700 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G016800.1 Myb 22 68
Gorai.010G016800.1 Myb 74 119

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_033907 Theobroma cacao TCM_033907 I 0.833
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.833
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.833
Cla022889 Citrullus lanatus Cla022889 I 0.833
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.828
PK29071.1 Cannabis sativa PK29071.1 I 0.816
Pm005220 Prunus mume Pm005220 I 0.813
MDP0000894463 Malus domestica MDP0000894463 I 0.813
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.813
MTR_3g101290 Medicago truncatula MTR_3g101290 I 0.800
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.796
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.796
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.789
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I 0.789
MDP0000641708 Malus domestica MDP0000641708 I 0.787
MDP0000477900 Malus domestica MDP0000477900 I 0.787
MDP0000784297 Malus domestica MDP0000784297 I 0.787
MDP0000480596 Malus domestica MDP0000480596 I 0.787
mgf006151m Mimulus guttatus mgf006151m I 0.787
MDP0000823270 Malus domestica MDP0000823270 I 0.787
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.784
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I 0.781
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.780
30170.m013927 Ricinus communis 30170.m013927 I 0.780
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.780
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.780
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.780
GLYMA06G04010 Glycine max GLYMA06G04010 I 0.777
Cla021015 Citrullus lanatus Cla021015 I 0.772
mgf003084m Mimulus guttatus mgf003084m I 0.771
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.771
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.760
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.759
cassava46434.m1 Manihot esculenta cassava46434.m1 I 0.758
GLYMA04G03910 Glycine max GLYMA04G03910 I 0.756
Ca_01522 Cicer arietinum Ca_01522 I 0.756
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.747
mgf025567m Mimulus guttatus mgf025567m I 0.745
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.743
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I 0.742
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.736
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.733
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I 0.731
MDP0000319124 Malus domestica MDP0000319124 I 0.730
MDP0000203733 Malus domestica MDP0000203733 I 0.730
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.729
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.729
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.729
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.729
Si032789m.g Setaria italica Si032789m.g I 0.729
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.725
OS09G0106700 Oryza sativa OS09G0106700 I 0.725
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.725
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.725
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.725
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.725
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.725
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.725
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.725
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.725
OB09G10200 Oryza brachyantha OB09G10200 I 0.725
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.725
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.725
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.725
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.725
OBART09G00310 Oryza barthii OBART09G00310 I 0.725
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.723
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.723
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.722
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.722
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.720
Gorai.009G275100 Gossypium raimondii Gorai.009G275100 I 0.718
Si017917m.g Setaria italica Si017917m.g I 0.716
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.716
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.716
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.716
OS02G0187700 Oryza sativa OS02G0187700 D 0.716
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.716
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.716
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.716
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.716
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.716
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.716
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.716
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.716
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.716
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.716
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.712
MYB1 Arabidopsis thaliana AT3G09230 D 0.711
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.711
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.711
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.709
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.709
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.706
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.705
27798.m000612 Ricinus communis 27798.m000612 I 0.705
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.705
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.705
Cla018417 Citrullus lanatus Cla018417 I 0.705
TCM_021796 Theobroma cacao TCM_021796 I 0.705
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I 0.704
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.704
MYB109 Arabidopsis lyrata fgenesh2_kg.5__1999__AT3G55730.1 I 0.704
MDP0000478512 Malus domestica MDP0000478512 I 0.703
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.703
29801.m003096 Ricinus communis 29801.m003096 I 0.700
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.700
TCM_042629 Theobroma cacao TCM_042629 I 0.700
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.700
PK07741.1 Cannabis sativa PK07741.1 D 0.700
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.697
MTR_5g082910 Medicago truncatula MTR_5g082910 I 0.696
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.696
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.696
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I 0.693
Sb03g039950 Sorghum bicolor Sb03g039950 I 0.693
Pavir.J13677 Panicum virgatum Pavir.J13677 I 0.693
GRMZM2G169316 Zea mays GRMZM2G169316 I 0.693
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.692
MDP0000284922 Malus domestica MDP0000284922 I 0.692
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.692
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.692
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.691
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.691
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.691
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.691
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.691
GLYMA17G36370 Glycine max GLYMA17G36370 I 0.689
mgf015566m Mimulus guttatus mgf015566m I 0.689
Pm018862 Prunus mume Pm018862 I 0.689
OS06G0637500 Oryza sativa OS06G0637500 I 0.687
ONIVA06G26080 Oryza nivara ONIVA06G26080 I 0.687
OMERI06G22090 Oryza meridionalis OMERI06G22090 I 0.687
ORUFI06G23790 Oryza rufipogon ORUFI06G23790 I 0.687
LPERR06G18380 Leersia perrieri LPERR06G18380 I 0.687
OGLUM06G23260 Oryza glumaepatula OGLUM06G23260 I 0.687
OPUNC06G19910 Oryza punctata OPUNC06G19910 I 0.687
BGIOSGA020819 Oryza indica BGIOSGA020819 I 0.687
ORGLA06G0184100 Oryza glaberrima ORGLA06G0184100 I 0.687
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.684
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.684
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.684
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.684
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.682
TCM_007138 Theobroma cacao TCM_007138 I 0.681
mgf018580m Mimulus guttatus mgf018580m I 0.681
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.680
Pavir.Db00693 Panicum virgatum Pavir.Db00693 I 0.679
Si006938m.g Setaria italica Si006938m.g I 0.679
Sb10g024950 Sorghum bicolor Sb10g024950 I 0.679
Pavir.Da00404 Panicum virgatum Pavir.Da00404 I 0.679
GRMZM5G803308 Zea mays GRMZM5G803308 I 0.679
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.678
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.678
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.676
Bo3g062160 Brassica oleracea Bo3g062160 I 0.676
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.675
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.675
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.675
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.675
Pm002576 Prunus mume Pm002576 I 0.675
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I 0.675
Cagra.2515s0014 Capsella grandiflora Cagra.2515s0014 I 0.675
Carubv10013882m.g Capsella rubella Carubv10013882m.g I 0.675
Cagra.0003s0013 Capsella grandiflora Cagra.0003s0013 I 0.674
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.674
Cla014191 Citrullus lanatus Cla014191 I 0.674
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.674
Carubv10017397m.g Capsella rubella Carubv10017397m.g I 0.674
GRMZM2G078820 Zea mays GRMZM2G078820 I 0.674
Thhalv10016794m.g Eutrema salsugineum Thhalv10016794m.g I 0.674
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.672
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.671
Bo4g025810 Brassica oleracea Bo4g025810 I 0.670
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.670
mgf025114m Mimulus guttatus mgf025114m N 0.669
MDP0000807341 Malus domestica MDP0000807341 I 0.669
MYB109 Arabidopsis thaliana AT3G55730 I 0.668
mgf020432m Mimulus guttatus mgf020432m I 0.668
PK16550.1 Cannabis sativa PK16550.1 I 0.667
GLYMA02G43280 Glycine max GLYMA02G43280 I 0.666
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.666
Bra005006 Brassica rapa Bra005006 I 0.665
MDP0000187872 Malus domestica MDP0000187872 I 0.665
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.663
Si001686m.g Setaria italica Si001686m.g I 0.663
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.662
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.662
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.662
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.661
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.661
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.661