CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.010G016800
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.010G016800
T287735_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN
NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.716
0.763
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.711
0.720
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.700
0.742
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.010G016800.1
Myb
22
68
KGPWSAEEDRVLTRLVERYGARNWSLISRYIKGRSGKSCRLRWCNQL
Gorai.010G016800.1
Myb
74
119
HRPFTKAEDETILAAHGVYGNRWATIAMLLPGRTDNAVKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_033907
Theobroma cacao
TCM_033907
I
0.833
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
0.833
VIT_18s0001g11170
Vitis vinifera
VIT_18s0001g11170
I
0.833
Cla022889
Citrullus lanatus
Cla022889
I
0.833
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.828
PK29071.1
Cannabis sativa
PK29071.1
I
0.816
Pm005220
Prunus mume
Pm005220
I
0.813
MDP0000894463
Malus domestica
MDP0000894463
I
0.813
PRUPE_ppa010735mg
Prunus persica
PRUPE_ppa010735mg
I
0.813
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
0.800
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
0.796
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
0.796
evm.TU.supercontig_376.4
Carica papaya
evm.TU.supercontig_376.4
I
0.789
gene09039-v1.0-hybrid
Fragaria vesca
gene09039-v1.0-hybrid
I
0.789
MDP0000641708
Malus domestica
MDP0000641708
I
0.787
MDP0000477900
Malus domestica
MDP0000477900
I
0.787
MDP0000784297
Malus domestica
MDP0000784297
I
0.787
MDP0000480596
Malus domestica
MDP0000480596
I
0.787
mgf006151m
Mimulus guttatus
mgf006151m
I
0.787
MDP0000823270
Malus domestica
MDP0000823270
I
0.787
Lus10032764.g
Linum usitatissimum
Lus10032764.g
I
0.784
Eucgr.F02372
Eucalyptus grandis
Eucgr.F02372
I
0.781
Ciclev10002239m.g
Citrus clementina
Ciclev10002239m.g
I
0.780
30170.m013927
Ricinus communis
30170.m013927
I
0.780
cassava16103.m1
Manihot esculenta
cassava16103.m1
I
0.780
Gorai.009G208900
Gossypium raimondii
Gorai.009G208900
I
0.780
orange1.1g025351m.g
Citrus sinensis
orange1.1g025351m.g
I
0.780
GLYMA06G04010
Glycine max
GLYMA06G04010
I
0.777
Cla021015
Citrullus lanatus
Cla021015
I
0.772
mgf003084m
Mimulus guttatus
mgf003084m
I
0.771
Lus10021762.g
Linum usitatissimum
Lus10021762.g
I
0.771
SapurV1A.0017s0390
Salix purpurea
SapurV1A.0017s0390
I
0.760
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.759
cassava46434.m1
Manihot esculenta
cassava46434.m1
I
0.758
GLYMA04G03910
Glycine max
GLYMA04G03910
I
0.756
Ca_01522
Cicer arietinum
Ca_01522
I
0.756
Cucsa.123440
Cucumis sativus
Cucsa.123440
I
0.747
mgf025567m
Mimulus guttatus
mgf025567m
I
0.745
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
0.743
Eucgr.F00031
Eucalyptus grandis
Eucgr.F00031
I
0.742
cassava7558.valid.m1
Manihot esculenta
cassava7558.valid.m1
I
0.736
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.733
POPTR_0002s13030
Populus trichocarpa
POPTR_0002s13030
I
0.731
MDP0000319124
Malus domestica
MDP0000319124
I
0.730
MDP0000203733
Malus domestica
MDP0000203733
I
0.730
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.729
Solyc05g052850.2
Solanum lycopersicum
Solyc05g052850.2
I
0.729
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.729
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.729
Si032789m.g
Setaria italica
Si032789m.g
I
0.729
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.725
OS09G0106700
Oryza sativa
OS09G0106700
I
0.725
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.725
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.725
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.725
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.725
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.725
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.725
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.725
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.725
OB09G10200
Oryza brachyantha
OB09G10200
I
0.725
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.725
Lus10028250.g
Linum usitatissimum
Lus10028250.g
I
0.725
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.725
Lus10040239.g
Linum usitatissimum
Lus10040239.g
I
0.725
OBART09G00310
Oryza barthii
OBART09G00310
I
0.725
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.723
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.723
orange1.1g017566m.g
Citrus sinensis
orange1.1g017566m.g
I
0.722
Ciclev10012003m.g
Citrus clementina
Ciclev10012003m.g
I
0.722
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.720
Gorai.009G275100
Gossypium raimondii
Gorai.009G275100
I
0.718
Si017917m.g
Setaria italica
Si017917m.g
I
0.716
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.716
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
0.716
MLOC_7426
Hordeum vulgare
MLOC_7426
I
0.716
OS02G0187700
Oryza sativa
OS02G0187700
D
0.716
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.716
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.716
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.716
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.716
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
0.716
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
0.716
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
0.716
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
0.716
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
0.716
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
0.716
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.712
MYB1
Arabidopsis thaliana
AT3G09230
D
0.711
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.711
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.711
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.709
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.709
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
0.706
Gorai.006G179700
Gossypium raimondii
Gorai.006G179700
I
0.705
27798.m000612
Ricinus communis
27798.m000612
I
0.705
Cucsa.066910
Cucumis sativus
Cucsa.066910
I
0.705
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
0.705
Cla018417
Citrullus lanatus
Cla018417
I
0.705
TCM_021796
Theobroma cacao
TCM_021796
I
0.705
PGSC0003DMG400027190
Solanum tuberosum
PGSC0003DMG400027190
I
0.704
GSMUA_Achr1G26140_001
Musa acuminata
GSMUA_Achr1G26140_001
I
0.704
MYB109
Arabidopsis lyrata
fgenesh2_kg.5__1999__AT3G55730.1
I
0.704
MDP0000478512
Malus domestica
MDP0000478512
I
0.703
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.703
29801.m003096
Ricinus communis
29801.m003096
I
0.700
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.700
TCM_042629
Theobroma cacao
TCM_042629
I
0.700
Gorai.011G278500
Gossypium raimondii
Gorai.011G278500
I
0.700
PK07741.1
Cannabis sativa
PK07741.1
D
0.700
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.697
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.696
GSMUA_Achr4G20150_001
Musa acuminata
GSMUA_Achr4G20150_001
I
0.696
GSMUA_Achr3G13070_001
Musa acuminata
GSMUA_Achr3G13070_001
I
0.696
Pavir.Ea03398
Panicum virgatum
Pavir.Ea03398
I
0.693
Sb03g039950
Sorghum bicolor
Sb03g039950
I
0.693
Pavir.J13677
Panicum virgatum
Pavir.J13677
I
0.693
GRMZM2G169316
Zea mays
GRMZM2G169316
I
0.693
Eucgr.J00250
Eucalyptus grandis
Eucgr.J00250
I
0.692
MDP0000284922
Malus domestica
MDP0000284922
I
0.692
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.692
VIT_03s0180g00210
Vitis vinifera
VIT_03s0180g00210
I
0.692
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.691
e_gw1.53.214.1
Physcomitrella patens
e_gw1.53.214.1
I
0.691
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.691
Lus10014103.g
Linum usitatissimum
Lus10014103.g
I
0.691
e_gw1.72.10.1
Physcomitrella patens
e_gw1.72.10.1
I
0.691
GLYMA17G36370
Glycine max
GLYMA17G36370
I
0.689
mgf015566m
Mimulus guttatus
mgf015566m
I
0.689
Pm018862
Prunus mume
Pm018862
I
0.689
OS06G0637500
Oryza sativa
OS06G0637500
I
0.687
ONIVA06G26080
Oryza nivara
ONIVA06G26080
I
0.687
OMERI06G22090
Oryza meridionalis
OMERI06G22090
I
0.687
ORUFI06G23790
Oryza rufipogon
ORUFI06G23790
I
0.687
LPERR06G18380
Leersia perrieri
LPERR06G18380
I
0.687
OGLUM06G23260
Oryza glumaepatula
OGLUM06G23260
I
0.687
OPUNC06G19910
Oryza punctata
OPUNC06G19910
I
0.687
BGIOSGA020819
Oryza indica
BGIOSGA020819
I
0.687
ORGLA06G0184100
Oryza glaberrima
ORGLA06G0184100
I
0.687
GSMUA_Achr9G22600_001
Musa acuminata
GSMUA_Achr9G22600_001
I
0.684
AtMYB1
Arabidopsis lyrata
scaffold_301043.1
I
0.684
Thhalv10021963m.g
Eutrema salsugineum
Thhalv10021963m.g
I
0.684
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
0.684
MLOC_10322
Hordeum vulgare
MLOC_10322
I
0.682
TCM_007138
Theobroma cacao
TCM_007138
I
0.681
mgf018580m
Mimulus guttatus
mgf018580m
I
0.681
SapurV1A.0709s0060
Salix purpurea
SapurV1A.0709s0060
I
0.680
Pavir.Db00693
Panicum virgatum
Pavir.Db00693
I
0.679
Si006938m.g
Setaria italica
Si006938m.g
I
0.679
Sb10g024950
Sorghum bicolor
Sb10g024950
I
0.679
Pavir.Da00404
Panicum virgatum
Pavir.Da00404
I
0.679
GRMZM5G803308
Zea mays
GRMZM5G803308
I
0.679
Solyc09g011780.2
Solanum lycopersicum
Solyc09g011780.2
I
0.678
PGSC0003DMG400020338
Solanum tuberosum
PGSC0003DMG400020338
I
0.678
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.676
Bo3g062160
Brassica oleracea
Bo3g062160
I
0.676
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.675
GLYMA05G21220
Glycine max
GLYMA05G21220
I
0.675
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.675
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.675
Pm002576
Prunus mume
Pm002576
I
0.675
PRUPE_ppa006851mg
Prunus persica
PRUPE_ppa006851mg
I
0.675
Cagra.2515s0014
Capsella grandiflora
Cagra.2515s0014
I
0.675
Carubv10013882m.g
Capsella rubella
Carubv10013882m.g
I
0.675
Cagra.0003s0013
Capsella grandiflora
Cagra.0003s0013
I
0.674
Aquca_083_00054
Aquilegia coerulea
Aquca_083_00054
I
0.674
Cla014191
Citrullus lanatus
Cla014191
I
0.674
Cucsa.102710
Cucumis sativus
Cucsa.102710
I
0.674
Carubv10017397m.g
Capsella rubella
Carubv10017397m.g
I
0.674
GRMZM2G078820
Zea mays
GRMZM2G078820
I
0.674
Thhalv10016794m.g
Eutrema salsugineum
Thhalv10016794m.g
I
0.674
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.672
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
0.671
Bo4g025810
Brassica oleracea
Bo4g025810
I
0.670
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.670
mgf025114m
Mimulus guttatus
mgf025114m
N
0.669
MDP0000807341
Malus domestica
MDP0000807341
I
0.669
MYB109
Arabidopsis thaliana
AT3G55730
I
0.668
mgf020432m
Mimulus guttatus
mgf020432m
I
0.668
PK16550.1
Cannabis sativa
PK16550.1
I
0.667
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.666
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.666
Bra005006
Brassica rapa
Bra005006
I
0.665
MDP0000187872
Malus domestica
MDP0000187872
I
0.665
GSMUA_Achr3G28230_001
Musa acuminata
GSMUA_Achr3G28230_001
I
0.663
Si001686m.g
Setaria italica
Si001686m.g
I
0.663
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
0.662
CM0528.210.nd
Lotus japonicus
CM0528.210.nd
I
0.662
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
0.662
GSMUA_Achr4G12950_001
Musa acuminata
GSMUA_Achr4G12950_001
I
0.661
SELMODRAFT_113522
Selaginella moellendorffii
SELMODRAFT_113522
I
0.661
SELMODRAFT_77255
Selaginella moellendorffii
SELMODRAFT_77255
I
0.661