Lus10014103.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10014103.g T287971_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.694 0.742
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.683 0.699
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.675 0.763
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.675 0.763
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.675 0.763
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.669 0.785
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.667 0.742
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.666 0.763
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.666 0.763
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.666 0.763
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.666 0.763
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.666 0.763
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.665 0.785
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.665 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10014103 Myb 11 57
Lus10014103 Myb 63 108

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.805
29801.m003096 Ricinus communis 29801.m003096 I 0.796
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.793
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.787
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.787
MDP0000187872 Malus domestica MDP0000187872 I 0.785
Pm021211 Prunus mume Pm021211 I 0.777
PRUPE_ppa023154mg Prunus persica PRUPE_ppa023154mg I 0.777
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.773
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.759
mgf025567m Mimulus guttatus mgf025567m I 0.750
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.749
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.746
PK16550.1 Cannabis sativa PK16550.1 I 0.745
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.742
SapurV1A.0262s0270 Salix purpurea SapurV1A.0262s0270 I 0.742
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.741
Si032789m.g Setaria italica Si032789m.g I 0.741
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.741
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.740
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.738
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.738
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.737
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.737
OBART09G00310 Oryza barthii OBART09G00310 I 0.737
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.737
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.737
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.737
TCM_007138 Theobroma cacao TCM_007138 I 0.737
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.737
OB09G10200 Oryza brachyantha OB09G10200 I 0.737
Cla013306 Citrullus lanatus Cla013306 I 0.737
OS09G0106700 Oryza sativa OS09G0106700 I 0.737
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.737
LPERR05G10150 Leersia perrieri LPERR05G10150 I 0.732
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.728
BRADI2G28910 Brachypodium distachyon BRADI2G28910 N 0.728
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.728
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.728
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.728
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.724
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.724
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.721
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.720
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I 0.718
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.712
PK29071.1 Cannabis sativa PK29071.1 I 0.712
Cla022889 Citrullus lanatus Cla022889 I 0.712
mgf006151m Mimulus guttatus mgf006151m I 0.712
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.712
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.711
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.711
Si017917m.g Setaria italica Si017917m.g I 0.711
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.711
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.711
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.711
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.711
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.711
MLOC_26177 Hordeum vulgare MLOC_26177 N 0.709
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.709
TCM_033907 Theobroma cacao TCM_033907 I 0.708
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.707
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I 0.706
mgf023922m Mimulus guttatus mgf023922m I 0.705
POPTR_0009s09890 Populus trichocarpa POPTR_0009s09890 I 0.704
Cla020946 Citrullus lanatus Cla020946 I 0.704
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.703
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.703
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.703
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.702
mgf014089m Mimulus guttatus mgf014089m I 0.702
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.701
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.701
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I 0.700
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I 0.700
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.700
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.700
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.700
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.700
GSMUA_Achr9G03720_001 Musa acuminata GSMUA_Achr9G03720_001 I 0.700
MTR_5g082910 Medicago truncatula MTR_5g082910 I 0.699
Cucsa.244650 Cucumis sativus Cucsa.244650 I 0.697
Cagra.1549s0005 Capsella grandiflora Cagra.1549s0005 I 0.696
MYB77 Arabidopsis lyrata fgenesh2_kg.5__1356__AT3G50060.1 I 0.696
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.696
Carubv10019440m.g Capsella rubella Carubv10019440m.g I 0.696
Thhalv10010581m.g Eutrema salsugineum Thhalv10010581m.g I 0.696
Bostr.6864s0236 Boechera stricta Bostr.6864s0236 I 0.696
Bo8g079430 Brassica oleracea Bo8g079430 I 0.696
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.695
OS02G0187700 Oryza sativa OS02G0187700 D 0.694
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.694
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.694
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.694
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.694
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.694
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.694
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.694
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.694
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.694
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.694
Si024344m.g Setaria italica Si024344m.g I 0.694
Cla022947 Citrullus lanatus Cla022947 I 0.692
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.692
Cucsa.395890 Cucumis sativus Cucsa.395890 I 0.692
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.692
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.692
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.692
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.692
TCM_000696 Theobroma cacao TCM_000696 I 0.691
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.691
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.691
30170.m013698 Ricinus communis 30170.m013698 I 0.691
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.691
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.690
ONIVA05G13470 Oryza nivara ONIVA05G13470 I 0.688
TCM_042629 Theobroma cacao TCM_042629 I 0.688
OGLUM05G13590 Oryza glumaepatula OGLUM05G13590 I 0.688
OMERI05G11510 Oryza meridionalis OMERI05G11510 I 0.688
BGIOSGA018238 Oryza indica BGIOSGA018238 I 0.688
OPUNC05G11020 Oryza punctata OPUNC05G11020 I 0.688
PK17282.1 Cannabis sativa PK17282.1 I 0.688
ORUFI05G13850 Oryza rufipogon ORUFI05G13850 I 0.688
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.688
ORGLA05G0109400 Oryza glaberrima ORGLA05G0109400 I 0.688
mgf003084m Mimulus guttatus mgf003084m I 0.687
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.687
GLYMA02G42030 Glycine max GLYMA02G42030 I 0.687
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.687
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.687
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.687
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.687
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I 0.686
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.685
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.685
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.683
MYB1 Arabidopsis thaliana AT3G09230 D 0.683
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I 0.683
Pm005332 Prunus mume Pm005332 I 0.682
MDP0000463846 Malus domestica MDP0000463846 I 0.682
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.682
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.682
Pm018862 Prunus mume Pm018862 I 0.681
mgf025114m Mimulus guttatus mgf025114m N 0.681
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I 0.681
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.681
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.680
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.680
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.680
SapurV1A.0708s0130 Salix purpurea SapurV1A.0708s0130 I 0.679
mgf002573m Mimulus guttatus mgf002573m I 0.679
MDP0000275800 Malus domestica MDP0000275800 I 0.678
MDP0000284922 Malus domestica MDP0000284922 I 0.677
MDP0000807341 Malus domestica MDP0000807341 I 0.677
LPERR06G18380 Leersia perrieri LPERR06G18380 I 0.677
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.677
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.677
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.677
Bo3g153550 Brassica oleracea Bo3g153550 I 0.676
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I 0.676
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.676
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I 0.676
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.676
MYB44 Arabidopsis thaliana AT5G67300 D 0.675
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.675
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I 0.675
Carubv10027659m.g Capsella rubella Carubv10027659m.g I 0.675
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I 0.675
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I 0.675
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I 0.675
Bo7g063830 Brassica oleracea Bo7g063830 I 0.675
BGIOSGA018239 Oryza indica BGIOSGA018239 I 0.675
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.675
Bra012149 Brassica rapa Bra012149 I 0.675
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.674
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.674
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.674
MTR_6g015455 Medicago truncatula MTR_6g015455 I 0.673
Bra036048 Brassica rapa Bra036048 I 0.673
Bo7g099180 Brassica oleracea Bo7g099180 I 0.672
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.672
Bra012910 Brassica rapa Bra012910 I 0.672
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.672
Lus10010055.g Linum usitatissimum Lus10010055.g I 0.672
27798.m000612 Ricinus communis 27798.m000612 I 0.672
Cla018417 Citrullus lanatus Cla018417 I 0.672
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.672
PK12959.1 Cannabis sativa PK12959.1 I 0.672
VIT_08s0007g01540 Vitis vinifera VIT_08s0007g01540 I 0.672
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.672
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.671
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.670
Pavir.J13677 Panicum virgatum Pavir.J13677 I 0.670
Sb03g039950 Sorghum bicolor Sb03g039950 I 0.670
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I 0.670
Si001686m.g Setaria italica Si001686m.g I 0.670
GRMZM2G169316 Zea mays GRMZM2G169316 I 0.670
Gorai.009G276400 Gossypium raimondii Gorai.009G276400 I 0.670
MYB73 Arabidopsis thaliana AT4G37260 D 0.669
Bo1g004900 Brassica oleracea Bo1g004900 I 0.669
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I 0.669
Carubv10007638m.g Capsella rubella Carubv10007638m.g I 0.669
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I 0.669
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.669
Bra011749 Brassica rapa Bra011749 I 0.669
mgf015566m Mimulus guttatus mgf015566m I 0.668
Sb10g024950 Sorghum bicolor Sb10g024950 I 0.668
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.667
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.667
PK07741.1 Cannabis sativa PK07741.1 D 0.667
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.667
29970.m000987 Ricinus communis 29970.m000987 I 0.667
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I 0.666
F3A4.140 Arabidopsis thaliana AT3G50060 D 0.666
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.666
Cla014191 Citrullus lanatus Cla014191 I 0.665
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.665
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.665
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.665
Bra010593 Brassica rapa Bra010593 I 0.665
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.665
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.665
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.665
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.665
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.665
GRMZM2G078820 Zea mays GRMZM2G078820 I 0.665
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.665
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.665
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.665
MTR_3g101290 Medicago truncatula MTR_3g101290 I 0.665
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.665
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.664
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I 0.664
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.664
Bo4g151410 Brassica oleracea Bo4g151410 I 0.663
Cla021015 Citrullus lanatus Cla021015 I 0.663
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.663
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.663
Bra032176 Brassica rapa Bra032176 I 0.663
AC213884.3_FG002 Zea mays AC213884.3_FG002 N 0.662
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I 0.662
OS01G0850400 Oryza sativa OS01G0850400 I 0.661
ORUFI01G40770 Oryza rufipogon ORUFI01G40770 I 0.661
OBART01G37390 Oryza barthii OBART01G37390 I 0.661
BGIOSGA000485 Oryza indica BGIOSGA000485 I 0.661
OB01G46120 Oryza brachyantha OB01G46120 I 0.661
LPERR01G32110 Leersia perrieri LPERR01G32110 I 0.661
OGLUM01G41330 Oryza glumaepatula OGLUM01G41330 I 0.661
OLONG_001357 Oryza longistaminata OLONG_001357 I 0.661
OPUNC01G36300 Oryza punctata OPUNC01G36300 I 0.661
ONIVA01G42300 Oryza nivara ONIVA01G42300 I 0.661
OMERI01G34370 Oryza meridionalis OMERI01G34370 I 0.661
ORGLA01G0312200 Oryza glaberrima ORGLA01G0312200 I 0.661