CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK29071.1
(
Cannabis sativa
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
PK29071.1
T290495_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN
NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.720
0.763
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.694
0.796
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.694
0.796
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.694
0.796
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.686
0.710
F3A4.140
M02299_2.00
Arabidopsis thaliana
YAACBGYY
RRCVGTTR
PBM
Weirauch et al.(2014)
pTH7112
0.685
0.796
F3A4.140
M07095_2.00
Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA
Dap-seq
OMalley et al.(2016)
MYB77_col_a
0.685
0.796
F3A4.140
M07096_2.00
Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT
Dap-seq
OMalley et al.(2016)
MYB77_colamp_a
0.685
0.796
F3A4.140
M02701_2.00
Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS
SELEX
Mathelier et al.(2014)
MA0575.1
0.685
0.796
F3A4.140
M11044_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB77_01
0.685
0.796
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.679
0.742
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK29071.1
Myb
71
117
KGPWSTEEDRILTRLVDRYGARNWSLISRYIKGRSGKSCRLRWCNQL
PK29071.1
Myb
123
168
HRPFSPAEDETILAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Cannabis sativa
TFs
222 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla022889
Citrullus lanatus
Cla022889
I
0.862
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
0.862
TCM_033907
Theobroma cacao
TCM_033907
I
0.858
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
0.842
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
0.824
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
0.824
GLYMA06G04010
Glycine max
GLYMA06G04010
I
0.818
evm.TU.supercontig_376.4
Carica papaya
evm.TU.supercontig_376.4
I
0.817
Gorai.010G016800
Gossypium raimondii
Gorai.010G016800
I
0.816
Ca_01522
Cicer arietinum
Ca_01522
I
0.814
orange1.1g025351m.g
Citrus sinensis
orange1.1g025351m.g
I
0.808
30170.m013927
Ricinus communis
30170.m013927
I
0.808
Ciclev10002239m.g
Citrus clementina
Ciclev10002239m.g
I
0.808
cassava16103.m1
Manihot esculenta
cassava16103.m1
I
0.808
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.807
mgf006151m
Mimulus guttatus
mgf006151m
I
0.798
VIT_18s0001g11170
Vitis vinifera
VIT_18s0001g11170
I
0.796
Gorai.009G208900
Gossypium raimondii
Gorai.009G208900
I
0.791
SapurV1A.0017s0390
Salix purpurea
SapurV1A.0017s0390
I
0.789
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.787
cassava46434.m1
Manihot esculenta
cassava46434.m1
I
0.787
MDP0000894463
Malus domestica
MDP0000894463
I
0.776
Cucsa.123440
Cucumis sativus
Cucsa.123440
I
0.776
PRUPE_ppa010735mg
Prunus persica
PRUPE_ppa010735mg
I
0.776
Pm005220
Prunus mume
Pm005220
I
0.776
POPTR_0002s13030
Populus trichocarpa
POPTR_0002s13030
I
0.776
GLYMA04G03910
Glycine max
GLYMA04G03910
I
0.767
mgf003084m
Mimulus guttatus
mgf003084m
I
0.766
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.755
Lus10021762.g
Linum usitatissimum
Lus10021762.g
I
0.751
Cla021015
Citrullus lanatus
Cla021015
I
0.751
gene09039-v1.0-hybrid
Fragaria vesca
gene09039-v1.0-hybrid
I
0.751
Si032789m.g
Setaria italica
Si032789m.g
I
0.750
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.750
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.750
MDP0000641708
Malus domestica
MDP0000641708
I
0.749
MDP0000477900
Malus domestica
MDP0000477900
I
0.749
MDP0000480596
Malus domestica
MDP0000480596
I
0.749
MDP0000823270
Malus domestica
MDP0000823270
I
0.749
MDP0000784297
Malus domestica
MDP0000784297
I
0.749
Lus10032764.g
Linum usitatissimum
Lus10032764.g
I
0.747
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.746
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.746
OB09G10200
Oryza brachyantha
OB09G10200
I
0.746
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.746
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.746
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.746
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.746
OBART09G00310
Oryza barthii
OBART09G00310
I
0.746
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.746
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.746
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.746
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.746
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.746
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.746
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.746
OS09G0106700
Oryza sativa
OS09G0106700
I
0.746
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.737
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.737
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.737
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.737
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.737
Si017917m.g
Setaria italica
Si017917m.g
I
0.737
cassava7558.valid.m1
Manihot esculenta
cassava7558.valid.m1
I
0.734
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.733
mgf025567m
Mimulus guttatus
mgf025567m
I
0.732
Gorai.009G275100
Gossypium raimondii
Gorai.009G275100
I
0.729
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
0.726
GSMUA_Achr1G26140_001
Musa acuminata
GSMUA_Achr1G26140_001
I
0.725
29801.m003096
Ricinus communis
29801.m003096
I
0.721
OPUNC06G19910
Oryza punctata
OPUNC06G19910
I
0.721
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.721
MLOC_7426
Hordeum vulgare
MLOC_7426
I
0.720
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
0.720
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
0.720
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
0.720
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
0.720
OS02G0187700
Oryza sativa
OS02G0187700
D
0.720
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
0.720
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
0.720
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
0.720
GSMUA_Achr4G20150_001
Musa acuminata
GSMUA_Achr4G20150_001
I
0.718
GSMUA_Achr3G13070_001
Musa acuminata
GSMUA_Achr3G13070_001
I
0.718
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.716
VIT_03s0180g00210
Vitis vinifera
VIT_03s0180g00210
I
0.714
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.713
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.713
Eucgr.F02372
Eucalyptus grandis
Eucgr.F02372
I
0.713
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.713
Lus10014103.g
Linum usitatissimum
Lus10014103.g
I
0.712
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.712
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.712
LPERR06G18380
Leersia perrieri
LPERR06G18380
I
0.708
Solyc09g011780.2
Solanum lycopersicum
Solyc09g011780.2
I
0.707
PGSC0003DMG400020338
Solanum tuberosum
PGSC0003DMG400020338
I
0.707
GSMUA_Achr9G22600_001
Musa acuminata
GSMUA_Achr9G22600_001
I
0.705
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
0.705
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.704
27798.m000612
Ricinus communis
27798.m000612
I
0.704
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.704
Gorai.006G179700
Gossypium raimondii
Gorai.006G179700
I
0.704
TCM_021796
Theobroma cacao
TCM_021796
I
0.704
Eucgr.F00031
Eucalyptus grandis
Eucgr.F00031
I
0.704
Pm002576
Prunus mume
Pm002576
I
0.704
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.704
PRUPE_ppa006851mg
Prunus persica
PRUPE_ppa006851mg
I
0.704
Cla018417
Citrullus lanatus
Cla018417
I
0.704
Cucsa.066910
Cucumis sativus
Cucsa.066910
I
0.704
TCM_007138
Theobroma cacao
TCM_007138
I
0.702
GSMUA_Achr3G28230_001
Musa acuminata
GSMUA_Achr3G28230_001
I
0.701
GLYMA17G36370
Glycine max
GLYMA17G36370
I
0.700
Sb10g024950
Sorghum bicolor
Sb10g024950
I
0.700
PGSC0003DMG400027190
Solanum tuberosum
PGSC0003DMG400027190
I
0.699
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.697
GLYMA05G21220
Glycine max
GLYMA05G21220
I
0.696
Cucsa.102710
Cucumis sativus
Cucsa.102710
I
0.695
SELMODRAFT_77255
Selaginella moellendorffii
SELMODRAFT_77255
I
0.695
SELMODRAFT_113522
Selaginella moellendorffii
SELMODRAFT_113522
I
0.695
Cla014191
Citrullus lanatus
Cla014191
I
0.695
MTR_4g094982
Medicago truncatula
MTR_4g094982
I
0.695
MYB44
Arabidopsis thaliana
AT5G67300
D
0.694
Carubv10027659m.g
Capsella rubella
Carubv10027659m.g
I
0.694
Bostr.0568s0154
Boechera stricta
Bostr.0568s0154
I
0.694
ATMYBR1
Arabidopsis lyrata
scaffold_803378.1
I
0.694
Thhalv10004676m.g
Eutrema salsugineum
Thhalv10004676m.g
I
0.694
Cagra.0342s0017
Capsella grandiflora
Cagra.0342s0017
I
0.694
Bra012149
Brassica rapa
Bra012149
I
0.694
Bo7g063830
Brassica oleracea
Bo7g063830
I
0.694
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.693
OS06G0637500
Oryza sativa
OS06G0637500
I
0.691
ONIVA06G26080
Oryza nivara
ONIVA06G26080
I
0.691
OMERI06G22090
Oryza meridionalis
OMERI06G22090
I
0.691
BGIOSGA020819
Oryza indica
BGIOSGA020819
I
0.691
ORGLA06G0184100
Oryza glaberrima
ORGLA06G0184100
I
0.691
OGLUM06G23260
Oryza glumaepatula
OGLUM06G23260
I
0.691
ORUFI06G23790
Oryza rufipogon
ORUFI06G23790
I
0.691
Gorai.009G215900
Gossypium raimondii
Gorai.009G215900
I
0.691
mgf025114m
Mimulus guttatus
mgf025114m
N
0.690
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.688
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.688
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.688
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
0.688
MYB1
Arabidopsis thaliana
AT3G09230
D
0.686
MDP0000187872
Malus domestica
MDP0000187872
I
0.686
mgf018580m
Mimulus guttatus
mgf018580m
I
0.685
Bo2g167960
Brassica oleracea
Bo2g167960
I
0.685
F3A4.140
Arabidopsis thaliana
AT3G50060
D
0.685
PK12959.1
Cannabis sativa
PK12959.1
I
0.684
VIT_08s0007g01540
Vitis vinifera
VIT_08s0007g01540
I
0.684
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
0.684
GSMUA_Achr5G28780_001
Musa acuminata
GSMUA_Achr5G28780_001
I
0.684
GSMUA_Achr6G33470_001
Musa acuminata
GSMUA_Achr6G33470_001
I
0.684
Pavir.Db00693
Panicum virgatum
Pavir.Db00693
I
0.683
GRMZM5G803308
Zea mays
GRMZM5G803308
I
0.683
Pavir.Da00404
Panicum virgatum
Pavir.Da00404
I
0.683
mgf015566m
Mimulus guttatus
mgf015566m
I
0.683
CM0528.210.nd
Lotus japonicus
CM0528.210.nd
I
0.683
Si006938m.g
Setaria italica
Si006938m.g
I
0.683
MLOC_10322
Hordeum vulgare
MLOC_10322
I
0.682
MDP0000478512
Malus domestica
MDP0000478512
I
0.682
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.682
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.682
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
0.682
Ciclev10001979m.g
Citrus clementina
Ciclev10001979m.g
I
0.680
orange1.1g022144m.g
Citrus sinensis
orange1.1g022144m.g
I
0.680
MDP0000203733
Malus domestica
MDP0000203733
I
0.679
MDP0000319124
Malus domestica
MDP0000319124
I
0.679
PK07741.1
Cannabis sativa
PK07741.1
D
0.679
GRMZM2G078820
Zea mays
GRMZM2G078820
I
0.678
Aquca_083_00054
Aquilegia coerulea
Aquca_083_00054
I
0.678
PK17282.1
Cannabis sativa
PK17282.1
I
0.677
SapurV1A.0597s0060
Salix purpurea
SapurV1A.0597s0060
I
0.677
PRUPE_ppa023154mg
Prunus persica
PRUPE_ppa023154mg
I
0.677
cassava47374.m1
Manihot esculenta
cassava47374.m1
I
0.677
30170.m013698
Ricinus communis
30170.m013698
I
0.677
Pm021211
Prunus mume
Pm021211
I
0.677
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.676
Gorai.011G278500
Gossypium raimondii
Gorai.011G278500
I
0.675
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.675
AMTR_s00006p00225600
Amborella trichopoda
AMTR_s00006p00225600
I
0.675
TCM_042629
Theobroma cacao
TCM_042629
I
0.675
Lus10028250.g
Linum usitatissimum
Lus10028250.g
I
0.674
Solyc05g052850.2
Solanum lycopersicum
Solyc05g052850.2
I
0.674
MTR_6g015455
Medicago truncatula
MTR_6g015455
I
0.674
Lus10040239.g
Linum usitatissimum
Lus10040239.g
I
0.674
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.673
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.673
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.673
GLYMA09G12164
Glycine max
GLYMA09G12164
N
0.673
orange1.1g017566m.g
Citrus sinensis
orange1.1g017566m.g
I
0.672
Ciclev10012003m.g
Citrus clementina
Ciclev10012003m.g
I
0.672
PK16550.1
Cannabis sativa
PK16550.1
I
0.671
mgf023922m
Mimulus guttatus
mgf023922m
I
0.671
e_gw1.72.10.1
Physcomitrella patens
e_gw1.72.10.1
I
0.670
e_gw1.53.214.1
Physcomitrella patens
e_gw1.53.214.1
I
0.670
Pm018862
Prunus mume
Pm018862
I
0.669
Cla020946
Citrullus lanatus
Cla020946
I
0.668
MDP0000284922
Malus domestica
MDP0000284922
I
0.668
PRUPE_ppa008979mg
Prunus persica
PRUPE_ppa008979mg
I
0.668
Pm005332
Prunus mume
Pm005332
I
0.668
Eucgr.J00250
Eucalyptus grandis
Eucgr.J00250
I
0.668
MDP0000463846
Malus domestica
MDP0000463846
I
0.668
MYB109
Arabidopsis lyrata
fgenesh2_kg.5__1999__AT3G55730.1
I
0.667
Cagra.0003s0013
Capsella grandiflora
Cagra.0003s0013
I
0.667
Carubv10017397m.g
Capsella rubella
Carubv10017397m.g
I
0.667
Cucsa.244650
Cucumis sativus
Cucsa.244650
I
0.666
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
0.666
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
0.666
Bo4g151410
Brassica oleracea
Bo4g151410
I
0.665
MDP0000275800
Malus domestica
MDP0000275800
I
0.664
gene00185-v1.0-hybrid
Fragaria vesca
gene00185-v1.0-hybrid
I
0.663
Eucgr.F00002
Eucalyptus grandis
Eucgr.F00002
I
0.663
BRADI2G28910
Brachypodium distachyon
BRADI2G28910
N
0.662
29970.m000987
Ricinus communis
29970.m000987
I
0.662
TCM_000696
Theobroma cacao
TCM_000696
I
0.662
Gorai.007G218100
Gossypium raimondii
Gorai.007G218100
I
0.662
Gorai.007G055600
Gossypium raimondii
Gorai.007G055600
I
0.662
Gorai.010G023500
Gossypium raimondii
Gorai.010G023500
I
0.662
Solyc02g092930.1
Solanum lycopersicum
Solyc02g092930.1
I
0.662
cassava43120.valid.m1
Manihot esculenta
cassava43120.valid.m1
I
0.662
PGSC0003DMG400024983
Solanum tuberosum
PGSC0003DMG400024983
I
0.662
GSMUA_Achr1G09750_001
Musa acuminata
GSMUA_Achr1G09750_001
I
0.661