CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_25.81
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_25.81
T287110_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TRB1
M01070_2.00
Arabidopsis thaliana
WRMCCTAR
YTAGGKYW
PBM
Sullivan et al.(2014)
pTH7117
0.805
0.787
OS01G0708000
M02326_2.00
Oryza sativa
WRMCCTAVNN
NNBTAGGKYW
PBM
Weirauch et al.(2014)
pTH8716
0.771
0.766
AT1G72740
M07033_2.00
Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD
Dap-seq
OMalley et al.(2016)
AT1G72740_col_a
0.746
0.766
AT1G72740
M07034_2.00
Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND
Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a
0.746
0.766
PK06103.1
M02348_2.00
Cannabis sativa
TGCCCTAG
CTAGGGCA
PBM
Weirauch et al.(2014)
pTH9649
0.716
0.787
TRB2
M02314_2.00
Arabidopsis thaliana
WRMCCTAR
YTAGGKYW
PBM
Weirauch et al.(2014)
pTH7094
0.705
0.766
TRB2
M01083_2.00
Arabidopsis thaliana
HRMCCTAR
YTAGGKYD
PBM
Sullivan et al.(2014)
pTH7260
0.705
0.766
TRB2
M07157_2.00
Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD
Dap-seq
OMalley et al.(2016)
TBP3_col_a
0.705
0.766
TRB2
M07158_2.00
Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD
Dap-seq
OMalley et al.(2016)
TBP3_colamp_a
0.705
0.766
estExt_fgenesh1_pg.C_Chr_13.00010057
M02366_2.00
Ostreococcus tauri
NRMCCTANN
NNTAGGKYN
PBM
Weirauch et al.(2014)
pTH9424
0.666
0.681
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_25.81
Myb
5
57
KQKWTVEEEKALVAGVDKHGPGKWRNILNDKEFGPLLTLRSNVDLKDKWRNLS
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
209 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo6g018740
Brassica oleracea
Bo6g018740
I
0.805
Bra018818
Brassica rapa
Bra018818
I
0.805
TRB1
Arabidopsis lyrata
fgenesh2_kg.1__4077__AT1G49950.2
I
0.805
Carubv10009836m.g
Capsella rubella
Carubv10009836m.g
I
0.805
Thhalv10011686m.g
Eutrema salsugineum
Thhalv10011686m.g
I
0.805
Cagra.2826s0004
Capsella grandiflora
Cagra.2826s0004
I
0.805
Bostr.26675s0174
Boechera stricta
Bostr.26675s0174
I
0.805
TRB1
Arabidopsis thaliana
AT1G49950
D
0.805
PGSC0003DMG401025742
Solanum tuberosum
PGSC0003DMG401025742
I
0.794
GSMUA_Achr2G13040_001
Musa acuminata
GSMUA_Achr2G13040_001
I
0.794
EuGene.0000030935
Micromonas pusilla
EuGene.0000030935
I
0.790
PGSC0003DMG400023131
Solanum tuberosum
PGSC0003DMG400023131
I
0.784
Solyc11g044320.1
Solanum lycopersicum
Solyc11g044320.1
I
0.784
OSTLU_27049
Ostreococcus lucimarinus
OSTLU_27049
I
0.784
Bo5g023860
Brassica oleracea
Bo5g023860
I
0.779
Bra025967
Brassica rapa
Bra025967
I
0.779
SELMODRAFT_49297
Selaginella moellendorffii
SELMODRAFT_49297
I
0.772
SELMODRAFT_49296
Selaginella moellendorffii
SELMODRAFT_49296
I
0.772
OB01G37330
Oryza brachyantha
OB01G37330
I
0.771
OBART01G28260
Oryza barthii
OBART01G28260
I
0.771
ORUFI01G31370
Oryza rufipogon
ORUFI01G31370
I
0.771
OPUNC01G28080
Oryza punctata
OPUNC01G28080
I
0.771
ORGLA01G0233700
Oryza glaberrima
ORGLA01G0233700
I
0.771
ONIVA01G32190
Oryza nivara
ONIVA01G32190
I
0.771
OMERI05G07460
Oryza meridionalis
OMERI05G07460
I
0.771
OLONG_008666
Oryza longistaminata
OLONG_008666
I
0.771
OGLUM01G32190
Oryza glumaepatula
OGLUM01G32190
I
0.771
OS01G0708000
Oryza sativa
OS01G0708000
D
0.771
BGIOSGA004300
Oryza indica
BGIOSGA004300
I
0.771
Bo8g067280
Brassica oleracea
Bo8g067280
I
0.767
AT1G17520
Arabidopsis thaliana
AT1G17520
I
0.767
Cagra.0824s0121
Capsella grandiflora
Cagra.0824s0121
I
0.767
Bra016598
Brassica rapa
Bra016598
I
0.767
scaffold_101953.1
Arabidopsis lyrata
scaffold_101953.1
I
0.767
AMTR_s00007p00193000
Amborella trichopoda
AMTR_s00007p00193000
I
0.766
Bra039650
Brassica rapa
Bra039650
I
0.766
mgf009594m
Mimulus guttatus
mgf009594m
I
0.766
Bo5g077530
Brassica oleracea
Bo5g077530
I
0.766
EuGene.1300010252
Ostreococcus RCC809
EuGene.1300010252
I
0.763
BRADI2G42240
Brachypodium distachyon
BRADI2G42240
I
0.762
GRMZM2G136887
Zea mays
GRMZM2G136887
I
0.762
Sb03g026470
Sorghum bicolor
Sb03g026470
I
0.762
Si002403m.g
Setaria italica
Si002403m.g
I
0.762
Pavir.J27218
Panicum virgatum
Pavir.J27218
I
0.762
Pavir.Ea02064
Panicum virgatum
Pavir.Ea02064
I
0.762
TRIUR3_08672
Triticum urartu
TRIUR3_08672
I
0.762
GRMZM2G087817
Zea mays
GRMZM2G087817
I
0.762
TRAES3BF118300070CFD_g
Triticum aestivum
TRAES3BF118300070CFD_g
I
0.762
Traes_3AL_CF481F6AC
Triticum aestivum
Traes_3AL_CF481F6AC
I
0.762
Bo8g104830
Brassica oleracea
Bo8g104830
I
0.757
fgenesh2_kg.2__1540__AT1G72740.1
Arabidopsis lyrata
fgenesh2_kg.2__1540__AT1G72740.1
I
0.746
Carubv10020636m.g
Capsella rubella
Carubv10020636m.g
I
0.746
Gorai.009G143000
Gossypium raimondii
Gorai.009G143000
I
0.746
AT1G72740
Arabidopsis thaliana
AT1G72740
D
0.746
Cagra.1013s0027
Capsella grandiflora
Cagra.1013s0027
I
0.746
gw1.1.287.1
Physcomitrella patens
gw1.1.287.1
I
0.745
gw1.176.27.1
Physcomitrella patens
gw1.176.27.1
I
0.745
Ca_08043
Cicer arietinum
Ca_08043
I
0.744
GSMUA_Achr6G30000_001
Musa acuminata
GSMUA_Achr6G30000_001
I
0.744
GLYMA15G14320
Glycine max
GLYMA15G14320
I
0.744
MTR_2g031870
Medicago truncatula
MTR_2g031870
I
0.744
GSMUA_Achr6G31260_001
Musa acuminata
GSMUA_Achr6G31260_001
I
0.744
gene25445-v1.0-hybrid
Fragaria vesca
gene25445-v1.0-hybrid
I
0.744
GLYMA09G03390
Glycine max
GLYMA09G03390
I
0.744
Bra030992
Brassica rapa
Bra030992
I
0.737
evm.TU.supercontig_106.31
Carica papaya
evm.TU.supercontig_106.31
I
0.728
Cucsa.341020
Cucumis sativus
Cucsa.341020
I
0.728
GLYMA07G00930
Glycine max
GLYMA07G00930
I
0.728
GLYMA08G20270
Glycine max
GLYMA08G20270
I
0.728
Carubv10009890m.g
Capsella rubella
Carubv10009890m.g
I
0.728
Thhalv10008387m.g
Eutrema salsugineum
Thhalv10008387m.g
I
0.728
cassava34930.m1
Manihot esculenta
cassava34930.m1
I
0.728
orange1.1g023740m.g
Citrus sinensis
orange1.1g023740m.g
I
0.728
29706.m001328
Ricinus communis
29706.m001328
I
0.728
Ciclev10026245m.g
Citrus clementina
Ciclev10026245m.g
I
0.728
Cla012798
Citrullus lanatus
Cla012798
I
0.728
TCM_029078
Theobroma cacao
TCM_029078
I
0.728
Bostr.7128s0363
Boechera stricta
Bostr.7128s0363
I
0.728
gene05764-v1.0-hybrid
Fragaria vesca
gene05764-v1.0-hybrid
I
0.726
Bra016037
Brassica rapa
Bra016037
I
0.725
Bo6g116150
Brassica oleracea
Bo6g116150
I
0.725
Solyc01g106940.2
Solanum lycopersicum
Solyc01g106940.2
I
0.724
MTR_0095s0040
Medicago truncatula
MTR_0095s0040
I
0.722
Pm013309
Prunus mume
Pm013309
I
0.718
PRUPE_ppa016498mg
Prunus persica
PRUPE_ppa016498mg
I
0.718
PDK_20s1413011g001
Phoenix dactylifera
PDK_20s1413011g001
I
0.716
Gorai.005G230800
Gossypium raimondii
Gorai.005G230800
I
0.716
Cla006547
Citrullus lanatus
Cla006547
I
0.716
Pm002374
Prunus mume
Pm002374
I
0.716
29661.m000926
Ricinus communis
29661.m000926
I
0.716
29812.m000204
Ricinus communis
29812.m000204
I
0.716
Cucsa.298390
Cucumis sativus
Cucsa.298390
I
0.716
VIT_07s0151g00480
Vitis vinifera
VIT_07s0151g00480
I
0.716
TRB1
Vitis vinifera
VIT_03s0091g01030
I
0.716
Eucgr.I01053
Eucalyptus grandis
Eucgr.I01053
I
0.716
Ciclev10028926m.g
Citrus clementina
Ciclev10028926m.g
I
0.716
VIT_00s1311g00020
Vitis vinifera
VIT_00s1311g00020
I
0.716
TCM_007242
Theobroma cacao
TCM_007242
I
0.716
MDP0000239354
Malus domestica
MDP0000239354
I
0.716
Aquca_004_00181
Aquilegia coerulea
Aquca_004_00181
I
0.716
SapurV1A.0019s0460
Salix purpurea
SapurV1A.0019s0460
I
0.716
cassava7508.valid.m1
Manihot esculenta
cassava7508.valid.m1
I
0.716
PK19870.1
Cannabis sativa
PK19870.1
I
0.716
PK06103.1
Cannabis sativa
PK06103.1
D
0.716
PDK_20s1467521g002
Phoenix dactylifera
PDK_20s1467521g002
I
0.716
orange1.1g022048m.g
Citrus sinensis
orange1.1g022048m.g
I
0.716
POPTR_0001s30000
Populus trichocarpa
POPTR_0001s30000
I
0.716
SapurV1A.0005s0260
Salix purpurea
SapurV1A.0005s0260
I
0.716
Lus10014653.g
Linum usitatissimum
Lus10014653.g
I
0.716
POPTR_0007s14920
Populus trichocarpa
POPTR_0007s14920
I
0.716
PRUPE_ppa009220mg
Prunus persica
PRUPE_ppa009220mg
I
0.716
Lus10033775.g
Linum usitatissimum
Lus10033775.g
I
0.716
MDP0000234807
Malus domestica
MDP0000234807
I
0.716
POPTR_0009s09020
Populus trichocarpa
POPTR_0009s09020
I
0.716
OLONG_011068
Oryza longistaminata
OLONG_011068
I
0.713
OMERI01G19490
Oryza meridionalis
OMERI01G19490
I
0.713
OB01G30760
Oryza brachyantha
OB01G30760
I
0.713
LPERR01G18090
Leersia perrieri
LPERR01G18090
I
0.713
OBART01G21150
Oryza barthii
OBART01G21150
I
0.713
OMERI01G19510
Oryza meridionalis
OMERI01G19510
I
0.713
ORGLA01G0168300
Oryza glaberrima
ORGLA01G0168300
I
0.713
OS01G0589300
Oryza sativa
OS01G0589300
I
0.713
BGIOSGA003871
Oryza indica
BGIOSGA003871
I
0.713
ORUFI01G23880
Oryza rufipogon
ORUFI01G23880
I
0.713
ONIVA01G23780
Oryza nivara
ONIVA01G23780
I
0.713
OPUNC01G21220
Oryza punctata
OPUNC01G21220
I
0.713
MTR_1g041765
Medicago truncatula
MTR_1g041765
I
0.712
Bostr.10273s0077
Boechera stricta
Bostr.10273s0077
I
0.706
Carubv10017722m.g
Capsella rubella
Carubv10017722m.g
I
0.705
Cucsa.103240
Cucumis sativus
Cucsa.103240
I
0.705
Cagra.4491s0006
Capsella grandiflora
Cagra.4491s0006
I
0.705
Cagra.0342s0046
Capsella grandiflora
Cagra.0342s0046
I
0.705
Ciclev10026089m.g
Citrus clementina
Ciclev10026089m.g
I
0.705
Bostr.6864s0256
Boechera stricta
Bostr.6864s0256
I
0.705
Bostr.0568s0184
Boechera stricta
Bostr.0568s0184
I
0.705
Carubv10026874m.g
Capsella rubella
Carubv10026874m.g
I
0.705
Gorai.007G224200
Gossypium raimondii
Gorai.007G224200
I
0.705
Thhalv10010562m.g
Eutrema salsugineum
Thhalv10010562m.g
I
0.705
orange1.1g020653m.g
Citrus sinensis
orange1.1g020653m.g
I
0.705
Bra029978
Brassica rapa
Bra029978
I
0.705
TRB2
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_8002157
I
0.705
LjT25P15.150.nd
Lotus japonicus
LjT25P15.150.nd
I
0.705
MTR_4g097130
Medicago truncatula
MTR_4g097130
I
0.705
GLYMA17G17370
Glycine max
GLYMA17G17370
I
0.705
TRB3
Arabidopsis lyrata
fgenesh2_kg.5__1337__AT3G49850.1
I
0.705
GLYMA01G40220
Glycine max
GLYMA01G40220
I
0.705
GLYMA05G22500
Glycine max
GLYMA05G22500
I
0.705
GLYMA11G05070
Glycine max
GLYMA11G05070
I
0.705
cassava37744.valid.m1
Manihot esculenta
cassava37744.valid.m1
I
0.705
Bo1g081300
Brassica oleracea
Bo1g081300
I
0.705
Ca_09355
Cicer arietinum
Ca_09355
I
0.705
Ca_02232
Cicer arietinum
Ca_02232
I
0.705
Cla014248
Citrullus lanatus
Cla014248
I
0.705
Pm021139
Prunus mume
Pm021139
I
0.705
cassava19326.valid.m1
Manihot esculenta
cassava19326.valid.m1
I
0.705
Eucgr.H02312
Eucalyptus grandis
Eucgr.H02312
I
0.705
TCM_000807
Theobroma cacao
TCM_000807
I
0.705
Thhalv10004691m.g
Eutrema salsugineum
Thhalv10004691m.g
I
0.705
TRB2
Arabidopsis thaliana
AT5G67580
D
0.705
Gorai.003G030800
Gossypium raimondii
Gorai.003G030800
I
0.705
PRUPE_ppa011492mg
Prunus persica
PRUPE_ppa011492mg
I
0.705
MTR_8g494240
Medicago truncatula
MTR_8g494240
I
0.702
Solyc02g064630.2
Solanum lycopersicum
Solyc02g064630.2
I
0.699
PGSC0003DMG402003328
Solanum tuberosum
PGSC0003DMG402003328
I
0.699
SELMODRAFT_49312
Selaginella moellendorffii
SELMODRAFT_49312
I
0.695
AMTR_s00036p00166880
Amborella trichopoda
AMTR_s00036p00166880
I
0.695
SELMODRAFT_443975
Selaginella moellendorffii
SELMODRAFT_443975
I
0.695
Bra030894
Brassica rapa
Bra030894
I
0.693
Bo3g184590
Brassica oleracea
Bo3g184590
I
0.693
Aquca_060_00026
Aquilegia coerulea
Aquca_060_00026
I
0.688
Traes_5AS_8756ECB5A
Triticum aestivum
Traes_5AS_8756ECB5A
I
0.683
SELMODRAFT_426759
Selaginella moellendorffii
SELMODRAFT_426759
I
0.683
BRADI4G01770
Brachypodium distachyon
BRADI4G01770
I
0.683
Traes_5BS_EB206B8BC
Triticum aestivum
Traes_5BS_EB206B8BC
I
0.683
Traes_5DS_3EE830A43
Triticum aestivum
Traes_5DS_3EE830A43
I
0.683
TRIUR3_10613
Triticum urartu
TRIUR3_10613
I
0.683
MLOC_10278
Hordeum vulgare
MLOC_10278
I
0.683
SELMODRAFT_413266
Selaginella moellendorffii
SELMODRAFT_413266
I
0.683
Pavir.Ea02570
Panicum virgatum
Pavir.Ea02570
I
0.681
Sb03g032530
Sorghum bicolor
Sb03g032530
I
0.681
GRMZM2G108424
Zea mays
GRMZM2G108424
I
0.681
Pavir.Eb02802
Panicum virgatum
Pavir.Eb02802
I
0.681
Traes_3AL_12B53AB09
Triticum aestivum
Traes_3AL_12B53AB09
I
0.681
TRAES3BF075800120CFD_g
Triticum aestivum
TRAES3BF075800120CFD_g
I
0.681
BRADI2G47820
Brachypodium distachyon
BRADI2G47820
I
0.681
LPERR01G24270
Leersia perrieri
LPERR01G24270
I
0.681
Si002467m.g
Setaria italica
Si002467m.g
I
0.681
mgf004823m
Mimulus guttatus
mgf004823m
I
0.679
SapurV1A.0235s0100
Salix purpurea
SapurV1A.0235s0100
I
0.677
SapurV1A.1368s0050
Salix purpurea
SapurV1A.1368s0050
I
0.677
POPTR_0014s01010
Populus trichocarpa
POPTR_0014s01010
I
0.677
Lus10011546.g
Linum usitatissimum
Lus10011546.g
I
0.677
mgf000125m
Mimulus guttatus
mgf000125m
I
0.677
mgf010975m
Mimulus guttatus
mgf010975m
I
0.677
Lus10019260.g
Linum usitatissimum
Lus10019260.g
I
0.677
MDP0000265359
Malus domestica
MDP0000265359
I
0.675
GSMUA_Achr7G01090_001
Musa acuminata
GSMUA_Achr7G01090_001
I
0.674
Cagra.1262s0035
Capsella grandiflora
Cagra.1262s0035
I
0.672
Carubv10009763m.g
Capsella rubella
Carubv10009763m.g
I
0.672
mgf011386m
Mimulus guttatus
mgf011386m
I
0.670
gene07496-v1.0-hybrid
Fragaria vesca
gene07496-v1.0-hybrid
I
0.668
estExt_fgenesh1_pg.C_Chr_13.00010057
Ostreococcus tauri
estExt_fgenesh1_pg.C_Chr_13.00010057
D
0.666
Bo3g096520
Brassica oleracea
Bo3g096520
I
0.666
TRB3
Arabidopsis thaliana
AT3G49850
I
0.666
Bra037839
Brassica rapa
Bra037839
I
0.666
MTR_5g015340
Medicago truncatula
MTR_5g015340
I
0.666
Bra037837
Brassica rapa
Bra037837
I
0.666
Bra024438
Brassica rapa
Bra024438
I
0.666
Bo9g019040
Brassica oleracea
Bo9g019040
I
0.666