Solyc03g045030.1 (Solanum lycopersicum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Solyc03g045030.1 T344406_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.823 0.382
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc03g045030.1.1 TCP 71 183

Links

Other TCP family TFs
Other Solanum lycopersicum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.952
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.870
mgf019480m Mimulus guttatus mgf019480m I 0.862
mgf022233m Mimulus guttatus mgf022233m I 0.862
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.859
29738.m001041 Ricinus communis 29738.m001041 I 0.858
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.858
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.853
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.844
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.841
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.841
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.836
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.836
BRC2 Arabidopsis thaliana AT1G68800 I 0.834
MDP0000272980 Malus domestica MDP0000272980 I 0.832
Pm029002 Prunus mume Pm029002 I 0.832
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.832
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.831
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.829
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.827
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.826
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.826
Cla016709 Citrullus lanatus Cla016709 I 0.826
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.826
MDP0000173048 Malus domestica MDP0000173048 I 0.824
PK12240.1 Cannabis sativa PK12240.1 D 0.823
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.823