Pvit_19024 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_19024 T137544_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB22
M04651_2.00 		Homo sapiens
HKCACWAYNRTWGTGMD
HKCACWAYNRTWGTGMD		 SELEX
Yin et al.(2017)
ZBTB22_eDBD_HT-SELEX 		0.822 0.977
ZBTB22
M04652_2.00 		Homo sapiens
HKCACWAYWRTWGTGMD
HKCACWAYWRTWGTGMD		 SELEX
Yin et al.(2017)
ZBTB22_eDBD_Methyl-HT-SELEX 		0.822 0.977
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_19024 C2H2 ZF 352 372
Pvit_19024 C2H2 ZF 378 400

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000639 Ricinus communis 27810.m000639 I 0.000
30170.m014115 Ricinus communis 30170.m014115 I 0.000
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.000
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.000
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.000
DREB2F Arabidopsis thaliana AT3G57600 D 0.000
DREB2G Arabidopsis thaliana AT5G18450 D 0.000
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.000
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.000
Bo4g111040 Brassica oleracea Bo4g111040 I 0.000
Bo6g073020 Brassica oleracea Bo6g073020 I 0.000
Bo6g086320 Brassica oleracea Bo6g086320 I 0.000
Bo8g092010 Brassica oleracea Bo8g092010 I 0.000
Bo9g155940 Brassica oleracea Bo9g155940 I 0.000
Bostr.20903s0012 Boechera stricta Bostr.20903s0012 I 0.000
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.000
Bra002159 Brassica rapa Bra002159 I 0.000
Bra003752 Brassica rapa Bra003752 I 0.000
Bra007341 Brassica rapa Bra007341 I 0.000
Bra014617 Brassica rapa Bra014617 I 0.000
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.000
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.000
Cagra.0578s0089 Capsella grandiflora Cagra.0578s0089 I 0.000
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.000
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.000
Carubv10017800m.g Capsella rubella Carubv10017800m.g I 0.000
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.000
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.000
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.000
chr1.CM0318.570.nd Lotus japonicus chr1.CM0318.570.nd I 0.000
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.000
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.000
Cla012194 Citrullus lanatus Cla012194 I 0.000
Cla017778 Citrullus lanatus Cla017778 I 0.000
Cucsa.336890 Cucumis sativus Cucsa.336890 I 0.000
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.000
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.000
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.000
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.000
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.000
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.000
fgenesh2_kg.5__2201__AT3G57600.1 Arabidopsis lyrata fgenesh2_kg.5__2201__AT3G57600.1 I 0.000
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.000
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.000
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.000
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.000
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.000
GLYMA14G32210 Glycine max GLYMA14G32210 I 0.000
GLYMA19G04461 Glycine max GLYMA19G04461 I 0.000
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.000
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.000
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.000
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.000
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.000
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.000
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.000
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.000
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.000
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.000
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.000
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.000
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.000
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.000
MDP0000250927 Malus domestica MDP0000250927 I 0.000
MDP0000703626 Malus domestica MDP0000703626 I 0.000
MDP0000871361 Malus domestica MDP0000871361 I 0.000
mgf017629m Mimulus guttatus mgf017629m I 0.000
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.000
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.000
OB01G13930 Oryza brachyantha OB01G13930 I 0.000
OBART01G04210 Oryza barthii OBART01G04210 I 0.000
OBART03G05550 Oryza barthii OBART03G05550 I 0.000
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.000
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.000
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.000
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.000
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.000
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.000
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.000
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.000
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.000
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.000
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.000
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.000
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.000
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.000
DREB2A Oryza sativa OS01G0165000 I 0.000
DREB2E Oryza sativa OS03G0174400 I 0.000
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.000
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.000
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.000
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.000
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.000
PK07402.1 Cannabis sativa PK07402.1 D 0.000
PK08602.1 Cannabis sativa PK08602.1 D 0.000
Pm003634 Prunus mume Pm003634 I 0.000
Pm025865 Prunus mume Pm025865 I 0.000
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.000
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.000
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.000
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.000
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.000
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.000
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.000
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.000
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.000
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.000
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.000
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.000
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.000
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.000
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.000
Solyc10g080310.1 Solanum lycopersicum Solyc10g080310.1 I 0.000
TCM_024756 Theobroma cacao TCM_024756 I 0.000
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.000
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.000
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.000
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.000