PDK_20s1879741g001 (Phoenix dactylifera)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 PDK_20s1879741g001 T197218_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.867 0.917
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.857 0.861
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.847 0.806
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.847 0.806
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.810 0.833
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1879741g001 GATA 111 148

Links

Other GATA family TFs
Other Phoenix dactylifera TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I
BXY_0690000 Bursaphelenchus xylophilus BXY_0690000 I
CBG06387 Caenorhabditis briggsae CBG06387 I
CBG06599 Caenorhabditis briggsae CBG06599 I
CBG06601 Caenorhabditis briggsae CBG06601 I
CBG06609 Caenorhabditis briggsae CBG06609 I
CBG06611 Caenorhabditis briggsae CBG06611 I
CBG09320 Caenorhabditis briggsae CBG09320 I
CBG09567 Caenorhabditis briggsae CBG09567 I
CBG14515 Caenorhabditis briggsae CBG14515 I
CBG20727 Caenorhabditis briggsae CBG20727 I
CBG20729 Caenorhabditis briggsae CBG20729 I
CBG22870 Caenorhabditis briggsae CBG22870 I
CBN12210 Caenorhabditis brenneri CBN12210 I
CBN21486 Caenorhabditis brenneri CBN21486 I
CBN23838 Caenorhabditis brenneri CBN23838 I
CBN28290 Caenorhabditis brenneri CBN28290 I
CJA02156 Caenorhabditis japonica CJA02156 I
CJA09697 Caenorhabditis japonica CJA09697 I
CJA28065 Caenorhabditis japonica CJA28065 I
CRE00301 Caenorhabditis remanei CRE00301 I
CRE05044 Caenorhabditis remanei CRE05044 I
CRE08691 Caenorhabditis remanei CRE08691 I
CRE15644 Caenorhabditis remanei CRE15644 I
CRE15675 Caenorhabditis remanei CRE15675 I
CRE18430 Caenorhabditis remanei CRE18430 I
CRE18699 Caenorhabditis remanei CRE18699 I
CRE30948 Caenorhabditis remanei CRE30948 I
CRE31070 Caenorhabditis remanei CRE31070 I
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I
GPLIN_000282900 Globodera pallida GPLIN_000282900 I
HCOI00483700 Haemonchus contortus HCOI00483700 I
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I
L596_g14536 Steinernema carpocapsae L596_g14536 I
L596_g14588 Steinernema carpocapsae L596_g14588 I
L596_g14589 Steinernema carpocapsae L596_g14589 I
L596_g14590 Steinernema carpocapsae L596_g14590 I
L596_g14596 Steinernema carpocapsae L596_g14596 I
L889_g6692 Steinernema feltiae L889_g6692 I
L889_g6694 Steinernema feltiae L889_g6694 I
L889_g6695 Steinernema feltiae L889_g6695 I
L889_g6696 Steinernema feltiae L889_g6696 I
L889_g6792 Steinernema feltiae L889_g6792 I
L892_g14834 Steinernema scapterisci L892_g14834 N
L892_g2780 Steinernema scapterisci L892_g2780 I
L892_g2781 Steinernema scapterisci L892_g2781 I
L892_g2782 Steinernema scapterisci L892_g2782 I
L893_g18992 Steinernema glaseri L893_g18992 I
L893_g18997 Steinernema glaseri L893_g18997 I
L898_g12798 Steinernema monticolum L898_g12798 I
L898_g3512 Steinernema monticolum L898_g3512 I
L898_g3514 Steinernema monticolum L898_g3514 I
L898_g3515 Steinernema monticolum L898_g3515 I
maker-nMf.1.1.scaf01765-snap-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01765-snap-gene-0.13 I
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I
Minc14668 Meloidogyne incognita Minc14668 I
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I
PPA14290 Pristionchus pacificus PPA14290 I
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I
SMUV_0000241401 Syphacia muris SMUV_0000241401 I
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I
nhr-45 Caenorhabditis elegans WBGene00003635 I
nhr-102 Caenorhabditis elegans WBGene00003692 I
nhr-130 Caenorhabditis elegans WBGene00003720 I
nhr-170 Caenorhabditis elegans WBGene00008309 I
nhr-213 Caenorhabditis elegans WBGene00011520 I
nhr-231 Caenorhabditis elegans WBGene00012449 I
nhr-232 Caenorhabditis elegans WBGene00012494 D
nhr-178 Caenorhabditis elegans WBGene00017510 I
nhr-142 Caenorhabditis elegans WBGene00018430 D