PGSC0003DMG400022709 (Solanum tuberosum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 PGSC0003DMG400022709 T201140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400058477 GRAS 48 469

Links

Other GRAS family TFs
Other Solanum tuberosum TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30024.m001746 Ricinus communis 30024.m001746 N 0.762
30131.m007244 Ricinus communis 30131.m007244 N 0.719
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.737
SCL3 Arabidopsis thaliana AT1G50420 N 0.718
Bo5g078760 Brassica oleracea Bo5g078760 N 0.706
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.718
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.713
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.710
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.730
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.730
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.762
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.713
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.747
Ca_11133 Cicer arietinum Ca_11133 N 0.768
Ca_27441 Cicer arietinum Ca_27441 N 0.764
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.774
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.778
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.770
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.760
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.710
Cla006433 Citrullus lanatus Cla006433 N 0.738
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.730
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.733
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.717
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.778
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.713
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.701
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.756
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.752
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.784
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.701
mgf008315m Mimulus guttatus mgf008315m N 0.749
mgf022906m Mimulus guttatus mgf022906m N 0.745
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.737
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.759
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.710
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.763
PDK_20s1303935g001 Phoenix dactylifera PDK_20s1303935g001 N 0.704
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.874
PK02707.1 Cannabis sativa PK02707.1 N 0.712
Pm012190 Prunus mume Pm012190 N 0.755
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.719
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.770
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.752
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.706
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.751
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.716
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.713
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.950
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.866
TCM_040833 Theobroma cacao TCM_040833 N 0.781
TCM_042392 Theobroma cacao TCM_042392 N 0.719
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.705
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.778
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.714