SELMODRAFT_447089 (Selaginella moellendorffii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SELMODRAFT_447089 T223110_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.661 0.754
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ11318 Homeodomain 18 74

Links

Other Homeodomain family TFs
Other Selaginella moellendorffii TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29983.m003128 Ricinus communis 29983.m003128 I 0.776
30190.m011307 Ricinus communis 30190.m011307 I 0.619
AMTR_s00058p00137050 Amborella trichopoda AMTR_s00058p00137050 I 0.798
Aquca_051_00028 Aquilegia coerulea Aquca_051_00028 I 0.787
RLT1 Arabidopsis thaliana AT1G28420 D 0.661
AT4G03250 Arabidopsis thaliana AT4G03250 I 0.619
RLT2 Arabidopsis thaliana AT5G44180 I 0.771
BGIOSGA004179 Oryza indica BGIOSGA004179 I 0.647
BGIOSGA022450 Oryza indica BGIOSGA022450 I 0.657
Bo3g143570 Brassica oleracea Bo3g143570 I 0.656
Bo5g055970 Brassica oleracea Bo5g055970 I 0.656
Bo7g067190 Brassica oleracea Bo7g067190 I 0.775
Bo9g006450 Brassica oleracea Bo9g006450 I 0.615
Bostr.15697s0165 Boechera stricta Bostr.15697s0165 I 0.657
Bostr.3148s0041 Boechera stricta Bostr.3148s0041 I 0.788
Bra010869 Brassica rapa Bra010869 I 0.656
Bra032908 Brassica rapa Bra032908 I 0.655
Bra033725 Brassica rapa Bra033725 I 0.773
Bra034196 Brassica rapa Bra034196 I 0.615
BRADI2G16647 Brachypodium distachyon BRADI2G16647 I 0.650
BRADI2G46230 Brachypodium distachyon BRADI2G46230 I 0.645
Cagra.0381s0009 Capsella grandiflora Cagra.0381s0009 I 0.787
Cagra.1822s0015 Capsella grandiflora Cagra.1822s0015 I 0.657
Cagra.2552s0003 Capsella grandiflora Cagra.2552s0003 I 0.619
Carubv10002996m.g Capsella rubella Carubv10002996m.g I 0.619
Carubv10025737m.g Capsella rubella Carubv10025737m.g I 0.787
cassava1593.valid.m1 Manihot esculenta cassava1593.valid.m1 I 0.653
cassava43653.valid.m1 Manihot esculenta cassava43653.valid.m1 I 0.776
Ca_00337 Cicer arietinum Ca_00337 I 0.653
Ca_06343 Cicer arietinum Ca_06343 I 0.653
Ca_11272 Cicer arietinum Ca_11272 I 0.786
Ca_21400 Cicer arietinum Ca_21400 I 0.666
Ciclev10014022m.g Citrus clementina Ciclev10014022m.g I 0.808
Ciclev10014023m.g Citrus clementina Ciclev10014023m.g I 0.653
Cla008712 Citrullus lanatus Cla008712 I 0.702
Cla009803 Citrullus lanatus Cla009803 I 0.653
Cucsa.046480 Cucumis sativus Cucsa.046480 I 0.653
Cucsa.087050 Cucumis sativus Cucsa.087050 I 0.704
Eucgr.D00596 Eucalyptus grandis Eucgr.D00596 I 0.630
Eucgr.K01058 Eucalyptus grandis Eucgr.K01058 I 0.776
evm.TU.supercontig_27.2 Carica papaya evm.TU.supercontig_27.2 I 0.653
evm.TU.supercontig_83.97 Carica papaya evm.TU.supercontig_83.97 I 0.637
F775_01844 Aegilops tauschii F775_01844 I 0.645
fgenesh1_pg.scaffold_15000027 Physcomitrella patens fgenesh1_pg.scaffold_15000027 I 0.638
HB-1 Arabidopsis lyrata fgenesh2_kg.1__3015__AT1G28420.1 I 0.657
fgenesh2_kg.8__392__AT5G44180.1 Arabidopsis lyrata fgenesh2_kg.8__392__AT5G44180.1 I 0.788
gene17756-v1.0-hybrid Fragaria vesca gene17756-v1.0-hybrid I 0.820
gene29752-v1.0-hybrid Fragaria vesca gene29752-v1.0-hybrid I 0.653
GLYMA02G44910 Glycine max GLYMA02G44910 I 0.702
GLYMA04G15260 Glycine max GLYMA04G15260 I 0.702
GLYMA06G44290 Glycine max GLYMA06G44290 I 0.767
GLYMA07G32180 Glycine max GLYMA07G32180 I 0.653
GLYMA13G24370 Glycine max GLYMA13G24370 I 0.653
GLYMA13G30860 Glycine max GLYMA13G30860 I 0.653
GLYMA14G03850 Glycine max GLYMA14G03850 I 0.702
Gorai.008G155100 Gossypium raimondii Gorai.008G155100 I 0.776
Gorai.010G243500 Gossypium raimondii Gorai.010G243500 I 0.637
Gorai.010G256900 Gossypium raimondii Gorai.010G256900 I 0.637
GRMZM2G060541 Zea mays GRMZM2G060541 I 0.647
GRMZM2G122750 Zea mays GRMZM2G122750 I 0.646
GRMZM2G125294 Zea mays GRMZM2G125294 I 0.646
GRMZM2G159357 Zea mays GRMZM2G159357 I 0.647
GSMUA_Achr6G26980_001 Musa acuminata GSMUA_Achr6G26980_001 I 0.774
LPERR01G22320 Leersia perrieri LPERR01G22320 I 0.647
LPERR05G21380 Leersia perrieri LPERR05G21380 I 0.657
Lus10013979.g Linum usitatissimum Lus10013979.g I 0.640
Lus10015325.g Linum usitatissimum Lus10015325.g I 0.629
Lus10015400.g Linum usitatissimum Lus10015400.g I 0.652
Lus10017688.g Linum usitatissimum Lus10017688.g N 0.690
Lus10018634.g Linum usitatissimum Lus10018634.g I 0.776
Lus10025454.g Linum usitatissimum Lus10025454.g I 0.629
Lus10039870.g Linum usitatissimum Lus10039870.g I 0.776
MDP0000192108 Malus domestica MDP0000192108 I 0.653
MDP0000207866 Malus domestica MDP0000207866 I 0.702
MDP0000288192 Malus domestica MDP0000288192 I 0.641
mgf006635m Mimulus guttatus mgf006635m I 0.637
mgf006858m Mimulus guttatus mgf006858m I 0.652
MLOC_62571 Hordeum vulgare MLOC_62571 I 0.645
MTR_2g014490 Medicago truncatula MTR_2g014490 I 0.653
MTR_3g045830 Medicago truncatula MTR_3g045830 I 0.702
MTR_4g078860 Medicago truncatula MTR_4g078860 N 0.701
MTR_4g088375 Medicago truncatula MTR_4g088375 I 0.653
MTR_5g089870 Medicago truncatula MTR_5g089870 N 0.666
OB01G35240 Oryza brachyantha OB01G35240 I 0.647
OBART05G25730 Oryza barthii OBART05G25730 I 0.657
OGLUM01G29920 Oryza glumaepatula OGLUM01G29920 I 0.647
OGLUM05G27370 Oryza glumaepatula OGLUM05G27370 I 0.657
OMERI01G23740 Oryza meridionalis OMERI01G23740 I 0.647
ONIVA01G29520 Oryza nivara ONIVA01G29520 I 0.647
ONIVA05G27640 Oryza nivara ONIVA05G27640 I 0.657
OPUNC01G25990 Oryza punctata OPUNC01G25990 I 0.647
orange1.1g000279m.g Citrus sinensis orange1.1g000279m.g I 0.653
orange1.1g004454m.g Citrus sinensis orange1.1g004454m.g I 0.808
ORGLA05G0222200 Oryza glaberrima ORGLA05G0222200 I 0.657
ORUFI01G29060 Oryza rufipogon ORUFI01G29060 I 0.647
ORUFI05G27630 Oryza rufipogon ORUFI05G27630 I 0.657
OS01G0672201 Oryza sativa OS01G0672201 I 0.647
Pavir.Ca00923 Panicum virgatum Pavir.Ca00923 I 0.645
Pavir.J20612 Panicum virgatum Pavir.J20612 I 0.645
PDK_20s1402391g002 Phoenix dactylifera PDK_20s1402391g002 I 0.651
PDK_20s1551001g001 Phoenix dactylifera PDK_20s1551001g001 I 0.684
PK06068.1 Cannabis sativa PK06068.1 I 0.820
PK13272.1 Cannabis sativa PK13272.1 I 0.653
Pm010098 Prunus mume Pm010098 I 0.653
POPTR_0007s01330 Populus trichocarpa POPTR_0007s01330 I 0.775
POPTR_0011s05660 Populus trichocarpa POPTR_0011s05660 I 0.642
POPTR_0017s04760 Populus trichocarpa POPTR_0017s04760 I 0.776
PRUPE_ppa000115mg Prunus persica PRUPE_ppa000115mg I 0.653
PRUPE_ppa005223mg Prunus persica PRUPE_ppa005223mg I 0.697
SapurV1A.0012s0660 Salix purpurea SapurV1A.0012s0660 I 0.653
SapurV1A.0032s0540 Salix purpurea SapurV1A.0032s0540 I 0.652
SapurV1A.0118s0310 Salix purpurea SapurV1A.0118s0310 I 0.775
SapurV1A.0693s0030 Salix purpurea SapurV1A.0693s0030 I 0.776
SapurV1A.3333s0010 Salix purpurea SapurV1A.3333s0010 I 0.775
SapurV1A.3547s0010 Salix purpurea SapurV1A.3547s0010 I 0.775
Sb03g030770 Sorghum bicolor Sb03g030770 I 0.647
Sb03g030782 Sorghum bicolor Sb03g030782 I 0.647
SELMODRAFT_422900 Selaginella moellendorffii SELMODRAFT_422900 I 0.756
SELMODRAFT_428998 Selaginella moellendorffii SELMODRAFT_428998 I 0.756
SELMODRAFT_447019 Selaginella moellendorffii SELMODRAFT_447019 I 0.867
Si004333m.g Setaria italica Si004333m.g I 0.647
Si020949m.g Setaria italica Si020949m.g I 0.646
Solyc02g077660.2 Solanum lycopersicum Solyc02g077660.2 I 0.631
Solyc07g053610.2 Solanum lycopersicum Solyc07g053610.2 I 0.788
TCM_008214 Theobroma cacao TCM_008214 I 0.776
TCM_029805 Theobroma cacao TCM_029805 I 0.637
Thhalv10003131m.g Eutrema salsugineum Thhalv10003131m.g I 0.788
Thhalv10006543m.g Eutrema salsugineum Thhalv10006543m.g I 0.657
Thhalv10028592m.g Eutrema salsugineum Thhalv10028592m.g I 0.619
VIT_10s0003g00290 Vitis vinifera VIT_10s0003g00290 I 0.652
VIT_12s0028g03080 Vitis vinifera VIT_12s0028g03080 I 0.788