SapurV1A.0260s0280 (Salix purpurea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 SapurV1A.0260s0280 T250846_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.902 0.667
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.902 0.667
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0260s0280.1.p MADF 39 119

Links

Other MADF family TFs
Other Salix purpurea TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29814.m000741 Ricinus communis 29814.m000741 I 0.816
29900.m001628 Ricinus communis 29900.m001628 I 0.902
AT3G58630 Arabidopsis thaliana AT3G58630 D 0.902
BGIOSGA020349 Oryza indica BGIOSGA020349 I 0.830
BGIOSGA020351 Oryza indica BGIOSGA020351 I 0.830
Bo6g075950 Brassica oleracea Bo6g075950 I 0.901
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I 0.902
Bra003346 Brassica rapa Bra003346 I 0.901
Bra007407 Brassica rapa Bra007407 I 0.858
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I 0.874
Carubv10017646m.g Capsella rubella Carubv10017646m.g I 0.874
cassava21220.m1 Manihot esculenta cassava21220.m1 I 0.902
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I 0.902
Ca_00394 Cicer arietinum Ca_00394 I 0.960
Ca_19877 Cicer arietinum Ca_19877 I 0.888
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I 0.945
Cla002288 Citrullus lanatus Cla002288 I 0.840
Cla009854 Citrullus lanatus Cla009854 I 0.948
Cla019967 Citrullus lanatus Cla019967 I 0.879
Cucsa.213110 Cucumis sativus Cucsa.213110 I 0.879
Cucsa.213120 Cucumis sativus Cucsa.213120 I 0.879
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I 0.887
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I 0.953
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I 0.901
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I 0.937
GLYMA12G33850 Glycine max GLYMA12G33850 I 0.849
GLYMA13G30280 Glycine max GLYMA13G30280 I 0.960
GLYMA13G36650 Glycine max GLYMA13G36650 I 0.893
GLYMA15G08890 Glycine max GLYMA15G08890 I 0.960
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I 0.960
GRMZM2G157219 Zea mays GRMZM2G157219 I 0.813
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I 0.851
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I 0.842
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I 0.844
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I 0.901
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I 0.814
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I 0.878
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I 0.892
Lus10007273.g Linum usitatissimum Lus10007273.g N 0.853
Lus10015282.g Linum usitatissimum Lus10015282.g I 0.864
Lus10025404.g Linum usitatissimum Lus10025404.g I 0.864
Lus10025406.g Linum usitatissimum Lus10025406.g N 0.864
MDP0000301451 Malus domestica MDP0000301451 I 0.939
mgf001239m Mimulus guttatus mgf001239m N 0.841
MTR_2g016140 Medicago truncatula MTR_2g016140 I 0.953
MTR_4g079960 Medicago truncatula MTR_4g079960 I 0.901
OBART05G25610 Oryza barthii OBART05G25610 I 0.830
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I 0.830
OMERI02G35600 Oryza meridionalis OMERI02G35600 I 0.830
ONIVA05G26860 Oryza nivara ONIVA05G26860 I 0.830
OPUNC05G23220 Oryza punctata OPUNC05G23220 I 0.815
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I 0.945
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I 0.830
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I 0.830
OS05G0560600 Oryza sativa OS05G0560600 I 0.830
Pavir.J11649 Panicum virgatum Pavir.J11649 I 0.813
Pavir.J33948 Panicum virgatum Pavir.J33948 I 0.813
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I 0.929
PGSC0003DMG400010197 Solanum tuberosum PGSC0003DMG400010197 I 0.872
PGSC0003DMG400020421 Solanum tuberosum PGSC0003DMG400020421 N 0.871
PK27986.1 Cannabis sativa PK27986.1 I 0.949
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I 0.959
POPTR_0003s11850 Populus trichocarpa POPTR_0003s11850 I 0.940
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I 0.817
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I 0.934
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I 0.892
SapurV1A.0045s0480 Salix purpurea SapurV1A.0045s0480 I 0.923
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I 0.817
Sb09g028350 Sorghum bicolor Sb09g028350 I 0.813
Si022565m.g Setaria italica Si022565m.g I 0.813
Solyc02g076810.2 Solanum lycopersicum Solyc02g076810.2 I 0.862
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I 0.939
TCM_029695 Theobroma cacao TCM_029695 I 0.960
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I 0.902
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I 0.909
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I 0.932