evm.TU.supercontig_2.186 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_2.186 T287101_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.362.4.1
M02341_2.00 		Physcomitrella patens
NNNRDATCNN
NNGATHYNNN		 PBM
Weirauch et al.(2014)
pTH8461 		0.862 0.936
ARR14
M00873_2.00 		Arabidopsis thaliana
NNAGATHCKS
SMGDATCTNN		 PBM
Franco-Zorrilla et al.(2014)
ARR14 		0.813 0.915
ARR14
M02293_2.00 		Arabidopsis thaliana
NAGATHYBNN
NNVRDATCTN		 PBM
Weirauch et al.(2014)
pTH7531 		0.813 0.915
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00 		Ostreococcus tauri
NNNDATCN
NGATHNNN		 PBM
Weirauch et al.(2014)
pTH9644 		0.802 0.894
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.797 0.894
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.795 0.894
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.682 0.809
AT5G05090
M02305_2.00 		Arabidopsis thaliana
NHAGATHCKNN
NNMGDATCTDN		 PBM
Weirauch et al.(2014)
pTH7104 		0.668 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_2.186 Myb 225 275

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

468 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29669.m000844 Ricinus communis 29669.m000844 I 0.000
29701.m000600 Ricinus communis 29701.m000600 I 0.000
30131.m007272 Ricinus communis 30131.m007272 I 0.000
30170.m014386 Ricinus communis 30170.m014386 I 0.000
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.000
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.000
AMTR_s00029p00240750 Amborella trichopoda AMTR_s00029p00240750 I 0.000
AMTR_s00044p00160130 Amborella trichopoda AMTR_s00044p00160130 I 0.000
AMTR_s00046p00227790 Amborella trichopoda AMTR_s00046p00227790 N 0.000
AMTR_s00171p00070550 Amborella trichopoda AMTR_s00171p00070550 I 0.000
Aquca_004_00335 Aquilegia coerulea Aquca_004_00335 I 0.000
Aquca_007_00897 Aquilegia coerulea Aquca_007_00897 I 0.000
Aquca_015_00344 Aquilegia coerulea Aquca_015_00344 I 0.000
Aquca_035_00040 Aquilegia coerulea Aquca_035_00040 I 0.000
Aquca_045_00054 Aquilegia coerulea Aquca_045_00054 I 0.000
HMGB2 Arabidopsis thaliana AT1G20693 I 0.000
HMGB3 Arabidopsis thaliana AT1G20696 I 0.000
HMGB4 Arabidopsis thaliana AT2G17560 I 0.000
HMGB1 Arabidopsis thaliana AT3G51880 I 0.000
HMGB7 Arabidopsis thaliana AT5G23420 N 0.000
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.000
BGIOSGA027814 Oryza indica BGIOSGA027814 I 0.000
BGIOSGA027819 Oryza indica BGIOSGA027819 I 0.000
Bo1g006360 Brassica oleracea Bo1g006360 I 0.000
Bo2g160920 Brassica oleracea Bo2g160920 I 0.000
Bo5g030580 Brassica oleracea Bo5g030580 I 0.000
Bo7g014280 Brassica oleracea Bo7g014280 I 0.000
Bo7g061420 Brassica oleracea Bo7g061420 I 0.000
Bo7g101270 Brassica oleracea Bo7g101270 I 0.000
Bo7g117500 Brassica oleracea Bo7g117500 I 0.000
Bo8g070350 Brassica oleracea Bo8g070350 I 0.000
Bo8g081200 Brassica oleracea Bo8g081200 I 0.000
Bo9g014140 Brassica oleracea Bo9g014140 I 0.000
Bostr.10199s0131 Boechera stricta Bostr.10199s0131 N 0.000
Bostr.18351s0219 Boechera stricta Bostr.18351s0219 I 0.000
Bostr.6864s0060 Boechera stricta Bostr.6864s0060 I 0.000
Bostr.7128s0662 Boechera stricta Bostr.7128s0662 I 0.000
Bostr.7128s0663 Boechera stricta Bostr.7128s0663 I 0.000
Bra002073 Brassica rapa Bra002073 I 0.000
Bra011624 Brassica rapa Bra011624 I 0.000
Bra017723 Brassica rapa Bra017723 I 0.000
Bra025838 Brassica rapa Bra025838 I 0.000
Bra026498 Brassica rapa Bra026498 I 0.000
Bra029371 Brassica rapa Bra029371 I 0.000
Bra037266 Brassica rapa Bra037266 I 0.000
BRADI1G29730 Brachypodium distachyon BRADI1G29730 I 0.000
BRADI4G37247 Brachypodium distachyon BRADI4G37247 I 0.000
Cagra.0086s0060 Capsella grandiflora Cagra.0086s0060 I 0.000
Cagra.1043s0022 Capsella grandiflora Cagra.1043s0022 I 0.000
Cagra.1891s0017 Capsella grandiflora Cagra.1891s0017 I 0.000
Cagra.6160s0027 Capsella grandiflora Cagra.6160s0027 I 0.000
Cagra.6160s0028 Capsella grandiflora Cagra.6160s0028 I 0.000
Carubv10001858m.g Capsella rubella Carubv10001858m.g I 0.000
Carubv10010586m.g Capsella rubella Carubv10010586m.g I 0.000
Carubv10012681m.g Capsella rubella Carubv10012681m.g I 0.000
Carubv10014808m.g Capsella rubella Carubv10014808m.g I 0.000
Carubv10018109m.g Capsella rubella Carubv10018109m.g I 0.000
cassava1392.valid.m1 Manihot esculenta cassava1392.valid.m1 I 0.000
cassava17389.m1 Manihot esculenta cassava17389.m1 I 0.000
cassava18624.valid.m1 Manihot esculenta cassava18624.valid.m1 I 0.000
cassava18625.valid.m1 Manihot esculenta cassava18625.valid.m1 I 0.000
cassava18626.valid.m1 Manihot esculenta cassava18626.valid.m1 I 0.000
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.000
cassava24859.valid.m1 Manihot esculenta cassava24859.valid.m1 I 0.000
cassava35948.valid.m1 Manihot esculenta cassava35948.valid.m1 I 0.000
cassava42371.valid.m1 Manihot esculenta cassava42371.valid.m1 I 0.000
cassava42372.valid.m1 Manihot esculenta cassava42372.valid.m1 I 0.000
cassava42373.valid.m1 Manihot esculenta cassava42373.valid.m1 I 0.000
cassava44923.m1 Manihot esculenta cassava44923.m1 I 0.000
Ca_05351 Cicer arietinum Ca_05351 I 0.000
Ca_09896 Cicer arietinum Ca_09896 I 0.000
Ca_10725 Cicer arietinum Ca_10725 I 0.000
Ca_19340 Cicer arietinum Ca_19340 I 0.000
chr1.CM0113.560.nc Lotus japonicus chr1.CM0113.560.nc I 0.000
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I 0.000
Ciclev10002782m.g Citrus clementina Ciclev10002782m.g I 0.000
Ciclev10012868m.g Citrus clementina Ciclev10012868m.g I 0.000
Ciclev10016587m.g Citrus clementina Ciclev10016587m.g N 0.000
Cla009093 Citrullus lanatus Cla009093 I 0.000
Cla009222 Citrullus lanatus Cla009222 I 0.000
Cla018386 Citrullus lanatus Cla018386 I 0.000
Cla023817 Citrullus lanatus Cla023817 I 0.000
Cucsa.067200 Cucumis sativus Cucsa.067200 I 0.000
Cucsa.272190 Cucumis sativus Cucsa.272190 I 0.000
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.000
Cucsa.323100 Cucumis sativus Cucsa.323100 I 0.000
estExt_fgenesh1_pm.C_880025 Physcomitrella patens estExt_fgenesh1_pm.C_880025 I 0.000
Eucgr.A00506 Eucalyptus grandis Eucgr.A00506 I 0.000
Eucgr.F03571 Eucalyptus grandis Eucgr.F03571 I 0.000
Eucgr.J02535 Eucalyptus grandis Eucgr.J02535 I 0.000
evm.TU.supercontig_11.167 Carica papaya evm.TU.supercontig_11.167 I 0.000
evm.TU.supercontig_19.183 Carica papaya evm.TU.supercontig_19.183 I 0.000
evm.TU.supercontig_247.1 Carica papaya evm.TU.supercontig_247.1 N 0.000
F775_27510 Aegilops tauschii F775_27510 I 0.000
GH21151 Drosophila grimshawi FBgn0128613 N 0.000
HMGB1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001281 I 0.000
HMGB2 Arabidopsis lyrata fgenesh2_kg.1__2255__AT1G20693.2 I 0.000
HMGB3 Arabidopsis lyrata fgenesh2_kg.1__2258__AT1G20696.3 I 0.000
HMGB4 Arabidopsis lyrata fgenesh2_kg.3__3350__AT2G17560.1 I 0.000
gene00778-v1.0-hybrid Fragaria vesca gene00778-v1.0-hybrid N 0.000
gene13043-v1.0-hybrid Fragaria vesca gene13043-v1.0-hybrid I 0.000
gene20487-v1.0-hybrid Fragaria vesca gene20487-v1.0-hybrid I 0.000
GLYMA01G28820 Glycine max GLYMA01G28820 I 0.000
GLYMA03G08270 Glycine max GLYMA03G08270 I 0.000
GLYMA10G43440 Glycine max GLYMA10G43440 I 0.000
GLYMA20G23370 Glycine max GLYMA20G23370 I 0.000
Gorai.001G198900 Gossypium raimondii Gorai.001G198900 I 0.000
Gorai.002G115100 Gossypium raimondii Gorai.002G115100 I 0.000
Gorai.002G263800 Gossypium raimondii Gorai.002G263800 I 0.000
Gorai.005G114500 Gossypium raimondii Gorai.005G114500 I 0.000
Gorai.006G181900 Gossypium raimondii Gorai.006G181900 I 0.000
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.000
Gorai.013G018500 Gossypium raimondii Gorai.013G018500 I 0.000
GRMZM2G066528 Zea mays GRMZM2G066528 I 0.000
GRMZM2G125648 Zea mays GRMZM2G125648 N 0.000
GRMZM2G162284 Zea mays GRMZM2G162284 I 0.000
GRMZM5G834758 Zea mays GRMZM5G834758 I 0.000
GSMUA_Achr10G07270_001 Musa acuminata GSMUA_Achr10G07270_001 I 0.000
GSMUA_Achr11G07320_001 Musa acuminata GSMUA_Achr11G07320_001 I 0.000
GSMUA_Achr2G03630_001 Musa acuminata GSMUA_Achr2G03630_001 I 0.000
GSMUA_Achr4G25860_001 Musa acuminata GSMUA_Achr4G25860_001 I 0.000
GSMUA_Achr9G21200_001 Musa acuminata GSMUA_Achr9G21200_001 I 0.000
GSMUA_AchrUn_randomG05290_001 Musa acuminata GSMUA_AchrUn_randomG05290_001 I 0.000
GSMUA_AchrUn_randomG22010_001 Musa acuminata GSMUA_AchrUn_randomG22010_001 I 0.000
gw1.106.59.1 Physcomitrella patens gw1.106.59.1 I 0.000
gw1.106.60.1 Physcomitrella patens gw1.106.60.1 I 0.000
HMEL015307 Heliconius melpomene HMEL015307 N 0.000
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.000
LjT35D08.150.nd Lotus japonicus LjT35D08.150.nd I 0.000
LPERR06G23570 Leersia perrieri LPERR06G23570 I 0.000
LPERR08G00140 Leersia perrieri LPERR08G00140 N 0.000
LPERR09G14820 Leersia perrieri LPERR09G14820 I 0.000
Lus10012252.g Linum usitatissimum Lus10012252.g I 0.000
Lus10016025.g Linum usitatissimum Lus10016025.g I 0.000
Lus10028298.g Linum usitatissimum Lus10028298.g I 0.000
Lus10035511.g Linum usitatissimum Lus10035511.g I 0.000
Lus10040192.g Linum usitatissimum Lus10040192.g I 0.000
Lus10041009.g Linum usitatissimum Lus10041009.g N 0.000
MDP0000205665 Malus domestica MDP0000205665 I 0.000
MDP0000275042 Malus domestica MDP0000275042 I 0.000
MDP0000362980 Malus domestica MDP0000362980 I 0.000
MDP0000607529 Malus domestica MDP0000607529 I 0.000
MDP0000757111 Malus domestica MDP0000757111 I 0.000
mgf000913m Mimulus guttatus mgf000913m I 0.000
mgf006113m Mimulus guttatus mgf006113m I 0.000
mgf008076m Mimulus guttatus mgf008076m I 0.000
mgf009124m Mimulus guttatus mgf009124m N 0.000
mgf009330m Mimulus guttatus mgf009330m I 0.000
mgf014518m Mimulus guttatus mgf014518m I 0.000
mgf016363m Mimulus guttatus mgf016363m I 0.000
mgf016608m Mimulus guttatus mgf016608m I 0.000
MLOC_78556 Hordeum vulgare MLOC_78556 I 0.000
MTR_1g115220 Medicago truncatula MTR_1g115220 I 0.000
MTR_3g115580 Medicago truncatula MTR_3g115580 I 0.000
MTR_5g024180 Medicago truncatula MTR_5g024180 I 0.000
MTR_7g068280 Medicago truncatula MTR_7g068280 I 0.000
MTR_8g073345 Medicago truncatula MTR_8g073345 I 0.000
OB06G35870 Oryza brachyantha OB06G35870 I 0.000
OB08G10120 Oryza brachyantha OB08G10120 N 0.000
OB09G25530 Oryza brachyantha OB09G25530 I 0.000
OBART06G28090 Oryza barthii OBART06G28090 I 0.000
OBART08G00070 Oryza barthii OBART08G00070 I 0.000
OGLUM06G29480 Oryza glumaepatula OGLUM06G29480 I 0.000
OGLUM08G00090 Oryza glumaepatula OGLUM08G00090 I 0.000
OLONG_007465 Oryza longistaminata OLONG_007465 I 0.000
OLONG_014445 Oryza longistaminata OLONG_014445 I 0.000
OMERI06G28030 Oryza meridionalis OMERI06G28030 I 0.000
ONIVA06G31070 Oryza nivara ONIVA06G31070 I 0.000
ONIVA08G00070 Oryza nivara ONIVA08G00070 I 0.000
OPUNC06G25640 Oryza punctata OPUNC06G25640 I 0.000
OPUNC08G00150 Oryza punctata OPUNC08G00150 I 0.000
orange1.1g026850m.g Citrus sinensis orange1.1g026850m.g N 0.000
orange1.1g030283m.g Citrus sinensis orange1.1g030283m.g I 0.000
orange1.1g031906m.g Citrus sinensis orange1.1g031906m.g I 0.000
ORGLA06G0238300 Oryza glaberrima ORGLA06G0238300 I 0.000
ORUFI06G30030 Oryza rufipogon ORUFI06G30030 I 0.000
ORUFI08G00080 Oryza rufipogon ORUFI08G00080 I 0.000
OS06G0728000 Oryza sativa OS06G0728000 I 0.000
OS08G0101100 Oryza sativa OS08G0101100 I 0.000
Pavir.Ba01379 Panicum virgatum Pavir.Ba01379 I 0.000
Pavir.Bb02550 Panicum virgatum Pavir.Bb02550 I 0.000
Pavir.Db00040 Panicum virgatum Pavir.Db00040 I 0.000
Pavir.J04920 Panicum virgatum Pavir.J04920 I 0.000
Pavir.J10680 Panicum virgatum Pavir.J10680 N 0.000
PDK_20s1306741g001 Phoenix dactylifera PDK_20s1306741g001 I 0.000
PDK_20s1355261g001 Phoenix dactylifera PDK_20s1355261g001 N 0.000
PDK_20s1709771g002 Phoenix dactylifera PDK_20s1709771g002 N 0.000
PGSC0003DMG400001567 Solanum tuberosum PGSC0003DMG400001567 I 0.000
PGSC0003DMG400008501 Solanum tuberosum PGSC0003DMG400008501 I 0.000
PGSC0003DMG400018685 Solanum tuberosum PGSC0003DMG400018685 I 0.000
PGSC0003DMG400025304 Solanum tuberosum PGSC0003DMG400025304 I 0.000
PK03866.1 Cannabis sativa PK03866.1 I 0.000
PK11149.1 Cannabis sativa PK11149.1 I 0.000
PK29786.1 Cannabis sativa PK29786.1 I 0.000
Pm002934 Prunus mume Pm002934 I 0.000
Pm006054 Prunus mume Pm006054 I 0.000
Pm018913 Prunus mume Pm018913 I 0.000
Pm026798 Prunus mume Pm026798 I 0.000
POPTR_0002s01000 Populus trichocarpa POPTR_0002s01000 I 0.000
POPTR_0005s10440 Populus trichocarpa POPTR_0005s10440 I 0.000
XM_002306945.1 Populus trichocarpa POPTR_0005s27390 I 0.000
HMGB6 Populus trichocarpa POPTR_0007s15320 I 0.000
POPTR_0010s19720 Populus trichocarpa POPTR_0010s19720 I 0.000
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.000
PRUPE_ppa007518mg Prunus persica PRUPE_ppa007518mg I 0.000
PRUPE_ppa011596mg Prunus persica PRUPE_ppa011596mg I 0.000
PRUPE_ppa012424mg Prunus persica PRUPE_ppa012424mg I 0.000
PRUPE_ppa012972mg Prunus persica PRUPE_ppa012972mg I 0.000
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.000
HMG-1 Pisum sativum Q41026_PEA D 0.000
SapurV1A.0016s0600 Salix purpurea SapurV1A.0016s0600 I 0.000
SapurV1A.0061s0170 Salix purpurea SapurV1A.0061s0170 I 0.000
SapurV1A.0085s0030 Salix purpurea SapurV1A.0085s0030 I 0.000
SapurV1A.0266s0310 Salix purpurea SapurV1A.0266s0310 I 0.000
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.000
SapurV1A.2780s0020 Salix purpurea SapurV1A.2780s0020 I 0.000
Sb02g032140 Sorghum bicolor Sb02g032140 I 0.000
Sb07g000230 Sorghum bicolor Sb07g000230 N 0.000
Sb10g030910 Sorghum bicolor Sb10g030910 I 0.000
scaffold_602413.1 Arabidopsis lyrata scaffold_602413.1 N 0.000
Si007288m.g Setaria italica Si007288m.g I 0.000
Si014434m.g Setaria italica Si014434m.g N 0.000
Si031512m.g Setaria italica Si031512m.g I 0.000
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N 0.000
Solyc02g082700.2 Solanum lycopersicum Solyc02g082700.2 I 0.000
Solyc04g008820.2 Solanum lycopersicum Solyc04g008820.2 I 0.000
TCM_000068 Theobroma cacao TCM_000068 I 0.000
TCM_007659 Theobroma cacao TCM_007659 I 0.000
TCM_021706 Theobroma cacao TCM_021706 I 0.000
TCM_034406 Theobroma cacao TCM_034406 I 0.000
TCM_042534 Theobroma cacao TCM_042534 I 0.000
Thhalv10004817m.g Eutrema salsugineum Thhalv10004817m.g N 0.000
Thhalv10009371m.g Eutrema salsugineum Thhalv10009371m.g I 0.000
Thhalv10009970m.g Eutrema salsugineum Thhalv10009970m.g I 0.000
Thhalv10010751m.g Eutrema salsugineum Thhalv10010751m.g I 0.000
Thhalv10022905m.g Eutrema salsugineum Thhalv10022905m.g I 0.000
Thhalv10026524m.g Eutrema salsugineum Thhalv10026524m.g I 0.000
Traes_5BL_9CC98DD38 Triticum aestivum Traes_5BL_9CC98DD38 I 0.000
Traes_5DL_DD9491112 Triticum aestivum Traes_5DL_DD9491112 I 0.000
TRIUR3_13577 Triticum urartu TRIUR3_13577 I 0.000
TRIUR3_27273 Triticum urartu TRIUR3_27273 I 0.000
VIT_04s0044g00110 Vitis vinifera VIT_04s0044g00110 I 0.000
HMGB1 Vitis vinifera VIT_08s0007g02200 I 0.000
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.000
VIT_13s0067g00640 Vitis vinifera VIT_13s0067g00640 I 0.000
VIT_18s0122g01190 Vitis vinifera VIT_18s0122g01190 I 0.000
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.000