ONIVA05G16770 (Oryza nivara)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 ONIVA05G16770 T322842_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL7
M02476_2.00 		Arabidopsis thaliana
DGTACKDNN
NNHMGTACH		 PBM
Weirauch et al.(2014)
pTH7288 		0.971 0.813
SPL7
M00888_2.00 		Arabidopsis thaliana
GGRGDAAAGG
CCTTTHCYCC		 PBM
Franco-Zorrilla et al.(2014)
SPL7 		0.971 0.813
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA05G16770.1 SBP 168 242

Links

Other SBP family TFs
Other Oryza nivara TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29613.m000367 Ricinus communis 29613.m000367 N 0.000
30099.m001671 Ricinus communis 30099.m001671 N 0.000
30099.m001672 Ricinus communis 30099.m001672 N 0.000
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.000
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.000
AGL61 Arabidopsis thaliana AT2G24840 N 0.000
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.000
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.000
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.000
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.000
Ca_07607 Cicer arietinum Ca_07607 N 0.000
Ca_26354 Cicer arietinum Ca_26354 N 0.000
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.000
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.000
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.000
Ciclev10032637m.g Citrus clementina Ciclev10032637m.g N 0.000
Cla010744 Citrullus lanatus Cla010744 N 0.000
Cucsa.342610 Cucumis sativus Cucsa.342610 N 0.000
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.000
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.000
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.000
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.000
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.000
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.000
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.000
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.000
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.000
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.000
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.000
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.000
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.000
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.000
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.000
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.000
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.000
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.000
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.000
MDP0000168914 Malus domestica MDP0000168914 N 0.000
mgf017842m Mimulus guttatus mgf017842m N 0.000
mgf018184m Mimulus guttatus mgf018184m N 0.000
mgf018529m Mimulus guttatus mgf018529m N 0.000
mgf020533m Mimulus guttatus mgf020533m N 0.000
mgf020939m Mimulus guttatus mgf020939m N 0.000
mgf022403m Mimulus guttatus mgf022403m N 0.000
mgf023207m Mimulus guttatus mgf023207m N 0.000
mgf024307m Mimulus guttatus mgf024307m N 0.000
mgf024490m Mimulus guttatus mgf024490m N 0.000
mgf025566m Mimulus guttatus mgf025566m N 0.000
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.000
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.000
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.000
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.000
Pm016629 Prunus mume Pm016629 N 0.000
Pm021070 Prunus mume Pm021070 N 0.000
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.000
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.000
POPTR_0009s08750 Populus trichocarpa POPTR_0009s08750 N 0.000
PRUPE_ppa016038mg Prunus persica PRUPE_ppa016038mg N 0.000
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.000
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.000
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.000
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.000
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.000
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.000
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.000
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.000
Thhalv10003426m.g Eutrema salsugineum Thhalv10003426m.g N 0.000
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.000
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.000