Eucgr.G02354 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.G02354 T344802_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.921 0.319
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.921 0.319
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.921 0.319
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.919 0.312
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G02354.1 TCP 31 110
Eucgr.G02354.1 TCP 97 154

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29822.m003500 Ricinus communis 29822.m003500 I
Al_scaffold_0006_290 Arabidopsis lyrata Al_scaffold_0006_290 I
AMTR_s00027p00144540 Amborella trichopoda AMTR_s00027p00144540 I
Aquca_009_01021 Aquilegia coerulea Aquca_009_01021 I
ATHB-12 Arabidopsis thaliana AT3G61890 D
HAT7 Arabidopsis thaliana AT5G15150 I
Bo2g005230 Brassica oleracea Bo2g005230 I
Bo2g012410 Brassica oleracea Bo2g012410 I
Bo3g002560 Brassica oleracea Bo3g002560 I
Bo3g010120 Brassica oleracea Bo3g010120 I
Bo4g100070 Brassica oleracea Bo4g100070 I
Bo8g097390 Brassica oleracea Bo8g097390 I
Bo9g165360 Brassica oleracea Bo9g165360 I
Bostr.13158s0194 Boechera stricta Bostr.13158s0194 I
Bostr.2902s0249 Boechera stricta Bostr.2902s0249 I
Bra006285 Brassica rapa Bra006285 I
Bra007637 Brassica rapa Bra007637 I
Bra008717 Brassica rapa Bra008717 I
Bra023506 Brassica rapa Bra023506 I
Bra028820 Brassica rapa Bra028820 I
BRADI4G35910 Brachypodium distachyon BRADI4G35910 I
Cagra.0154s0024 Capsella grandiflora Cagra.0154s0024 I
Cagra.0483s0055 Capsella grandiflora Cagra.0483s0055 I
Cagra.1036s0042 Capsella grandiflora Cagra.1036s0042 I
Carubv10001498m.g Capsella rubella Carubv10001498m.g I
Carubv10002831m.g Capsella rubella Carubv10002831m.g I
Carubv10017952m.g Capsella rubella Carubv10017952m.g I
cassava13234.valid.m1 Manihot esculenta cassava13234.valid.m1 I
cassava39955.m1 Manihot esculenta cassava39955.m1 I
Ca_10527 Cicer arietinum Ca_10527 I
Ca_17608 Cicer arietinum Ca_17608 I
chr2.LjT39I02.10.nc Lotus japonicus chr2.LjT39I02.10.nc I
Ciclev10012352m.g Citrus clementina Ciclev10012352m.g I
Ciclev10012525m.g Citrus clementina Ciclev10012525m.g I
Cla010510 Citrullus lanatus Cla010510 I
Cla018017 Citrullus lanatus Cla018017 I
Cucsa.158420 Cucumis sativus Cucsa.158420 I
Cucsa.378700 Cucumis sativus Cucsa.378700 I
Eucgr.A01421 Eucalyptus grandis Eucgr.A01421 I
Eucgr.I01934 Eucalyptus grandis Eucgr.I01934 I
Eucgr.I02255 Eucalyptus grandis Eucgr.I02255 I
evm.TU.supercontig_14.18 Carica papaya evm.TU.supercontig_14.18 I
evm.TU.supercontig_80.1 Carica papaya evm.TU.supercontig_80.1 I
ATHB-3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001192 I
ATHB-12 Arabidopsis lyrata fgenesh2_kg.5__2686__AT3G61890.1 I
gene18656-v1.0-hybrid Fragaria vesca gene18656-v1.0-hybrid I
gene28322-v1.0-hybrid Fragaria vesca gene28322-v1.0-hybrid I
GLYMA06G35050 Glycine max GLYMA06G35050 I
GLYMA09G37410 Glycine max GLYMA09G37410 I
GLYMA12G18720 Glycine max GLYMA12G18720 I
GLYMA18G49290 Glycine max GLYMA18G49290 I
GLYMA19G02490 Glycine max GLYMA19G02490 I
Gorai.001G256300 Gossypium raimondii Gorai.001G256300 I
Gorai.006G022100 Gossypium raimondii Gorai.006G022100 I
GRMZM2G034113 Zea mays GRMZM2G034113 I
GRMZM2G041462 Zea mays GRMZM2G041462 I
GSMUA_Achr10G18860_001 Musa acuminata GSMUA_Achr10G18860_001 I
GSMUA_Achr4G00550_001 Musa acuminata GSMUA_Achr4G00550_001 I
GSMUA_Achr6G10660_001 Musa acuminata GSMUA_Achr6G10660_001 I
GSMUA_Achr6G36450_001 Musa acuminata GSMUA_Achr6G36450_001 I
MDP0000124827 Malus domestica MDP0000124827 I
MDP0000311522 Malus domestica MDP0000311522 I
MDP0000316497 Malus domestica MDP0000316497 I
MDP0000737128 Malus domestica MDP0000737128 I
mgf019824m Mimulus guttatus mgf019824m I
mgf022748m Mimulus guttatus mgf022748m I
MTR_6g011610 Medicago truncatula MTR_6g011610 I
MTR_8g026960 Medicago truncatula MTR_8g026960 I
orange1.1g040769m.g Citrus sinensis orange1.1g040769m.g I
orange1.1g041877m.g Citrus sinensis orange1.1g041877m.g I
Pavir.Ba01249 Panicum virgatum Pavir.Ba01249 I
Pavir.Bb02633 Panicum virgatum Pavir.Bb02633 I
PGSC0003DMG400002692 Solanum tuberosum PGSC0003DMG400002692 I
PGSC0003DMG400005472 Solanum tuberosum PGSC0003DMG400005472 I
PGSC0003DMG400018509 Solanum tuberosum PGSC0003DMG400018509 I
PGSC0003DMG400031777 Solanum tuberosum PGSC0003DMG400031777 I
PK20392.1 Cannabis sativa PK20392.1 D
Pm015861 Prunus mume Pm015861 I
Pm018314 Prunus mume Pm018314 I
POPTR_0017s11800 Populus trichocarpa POPTR_0017s11800 I
PRUPE_ppa010647mg Prunus persica PRUPE_ppa010647mg I
PRUPE_ppa020465mg Prunus persica PRUPE_ppa020465mg I
Q39944_HELAN Helianthus annuus Q39944_HELAN D
SapurV1A.1260s0050 Salix purpurea SapurV1A.1260s0050 I
SapurV1A.2065s0030 Salix purpurea SapurV1A.2065s0030 I
Sb02g030660 Sorghum bicolor Sb02g030660 I
Si030983m.g Setaria italica Si030983m.g I
Solyc02g077590.1 Solanum lycopersicum Solyc02g077590.1 I
Solyc03g082550.2 Solanum lycopersicum Solyc03g082550.2 I
Solyc06g053220.2 Solanum lycopersicum Solyc06g053220.2 I
Solyc09g008810.2 Solanum lycopersicum Solyc09g008810.2 I
TCM_018470 Theobroma cacao TCM_018470 I
Thhalv10006221m.g Eutrema salsugineum Thhalv10006221m.g I
Thhalv10014157m.g Eutrema salsugineum Thhalv10014157m.g I
VIT_16s0098g01170 Vitis vinifera VIT_16s0098g01170 I
VIT_18s0001g06430 Vitis vinifera VIT_18s0001g06430 I