Hsal_05065--XP_001120527.1_APIME (Harpegnathos saltator)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Hsal_05065--XP_001120527.1_APIME T047387_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nau
M03600_2.00 		Drosophila melanogaster
DBAACAGCTGTYVH
DBRACAGCTGTTVH		 SELEX
Nitta et al.(2015)
nau_1 		0.884 0.942
nau
M03601_2.00 		Drosophila melanogaster
NBRACAGCTGACRC
GYGTCAGCTGTYVN		 SELEX
Nitta et al.(2015)
nau_2 		0.884 0.942
nau
M03602_2.00 		Drosophila melanogaster
RCGWCAGCTGWCGC
GCGWCAGCTGWCGY		 SELEX
Nitta et al.(2015)
nau_3 		0.884 0.942
nau
M05949_2.00 		Drosophila melanogaster
CACCTGYY
RRCAGGTG		 B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922 		0.884 0.942
nau
M05950_2.00 		Drosophila melanogaster
RACASCTGACGC
GCGTCAGSTGTY		 B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922 		0.884 0.942
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hsal_05065--XP_001120527.1_APIME bHLH 184 235

Links

Other bHLH family TFs
Other Harpegnathos saltator TFs

77 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATHB-12 Arabidopsis thaliana AT3G61890 D
PK20392.1 Cannabis sativa PK20392.1 D
Q39944_HELAN Helianthus annuus Q39944_HELAN D
Cucsa.378700 Cucumis sativus Cucsa.378700 I
Ciclev10012352m.g Citrus clementina Ciclev10012352m.g I
Carubv10017952m.g Capsella rubella Carubv10017952m.g I
Carubv10002831m.g Capsella rubella Carubv10002831m.g I
Carubv10001498m.g Capsella rubella Carubv10001498m.g I
Cagra.1036s0042 Capsella grandiflora Cagra.1036s0042 I
Cagra.0483s0055 Capsella grandiflora Cagra.0483s0055 I
Cagra.0154s0024 Capsella grandiflora Cagra.0154s0024 I
Bostr.2902s0249 Boechera stricta Bostr.2902s0249 I
Bostr.13158s0194 Boechera stricta Bostr.13158s0194 I
Aquca_009_01021 Aquilegia coerulea Aquca_009_01021 I
mgf022748m Mimulus guttatus mgf022748m I
mgf019824m Mimulus guttatus mgf019824m I
Eucgr.A01421 Eucalyptus grandis Eucgr.A01421 I
Cucsa.158420 Cucumis sativus Cucsa.158420 I
cassava39955.m1 Manihot esculenta cassava39955.m1 I
cassava13234.valid.m1 Manihot esculenta cassava13234.valid.m1 I
29822.m003500 Ricinus communis 29822.m003500 I
Pm018314 Prunus mume Pm018314 I
Pm015861 Prunus mume Pm015861 I
Cla018017 Citrullus lanatus Cla018017 I
Cla010510 Citrullus lanatus Cla010510 I
Ca_17608 Cicer arietinum Ca_17608 I
MDP0000311522 Malus domestica MDP0000311522 I
chr2.LjT39I02.10.nc Lotus japonicus chr2.LjT39I02.10.nc I
Thhalv10014157m.g Eutrema salsugineum Thhalv10014157m.g I
Thhalv10006221m.g Eutrema salsugineum Thhalv10006221m.g I
SapurV1A.2065s0030 Salix purpurea SapurV1A.2065s0030 I
SapurV1A.1260s0050 Salix purpurea SapurV1A.1260s0050 I
Pavir.Bb02633 Panicum virgatum Pavir.Bb02633 I
Pavir.Ba01249 Panicum virgatum Pavir.Ba01249 I
orange1.1g041877m.g Citrus sinensis orange1.1g041877m.g I
orange1.1g040769m.g Citrus sinensis orange1.1g040769m.g I
MDP0000737128 Malus domestica MDP0000737128 I
MDP0000316497 Malus domestica MDP0000316497 I
Ciclev10012525m.g Citrus clementina Ciclev10012525m.g I
MDP0000124827 Malus domestica MDP0000124827 I
Gorai.006G022100 Gossypium raimondii Gorai.006G022100 I
Gorai.001G256300 Gossypium raimondii Gorai.001G256300 I
gene28322-v1.0-hybrid Fragaria vesca gene28322-v1.0-hybrid I
gene18656-v1.0-hybrid Fragaria vesca gene18656-v1.0-hybrid I
evm.TU.supercontig_80.1 Carica papaya evm.TU.supercontig_80.1 I
evm.TU.supercontig_14.18 Carica papaya evm.TU.supercontig_14.18 I
Eucgr.I02255 Eucalyptus grandis Eucgr.I02255 I
Eucgr.I01934 Eucalyptus grandis Eucgr.I01934 I
Ca_10527 Cicer arietinum Ca_10527 I
Bra008717 Brassica rapa Bra008717 I
GRMZM2G034113 Zea mays GRMZM2G034113 I
GLYMA19G02490 Glycine max GLYMA19G02490 I
GLYMA18G49290 Glycine max GLYMA18G49290 I
GLYMA12G18720 Glycine max GLYMA12G18720 I
GLYMA09G37410 Glycine max GLYMA09G37410 I
GLYMA06G35050 Glycine max GLYMA06G35050 I
ATHB-12 Arabidopsis lyrata fgenesh2_kg.5__2686__AT3G61890.1 I
ATHB-3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6001192 I
BRADI4G35910 Brachypodium distachyon BRADI4G35910 I
Bra028820 Brassica rapa Bra028820 I
Bra023506 Brassica rapa Bra023506 I
GRMZM2G041462 Zea mays GRMZM2G041462 I
Bra007637 Brassica rapa Bra007637 I
Bra006285 Brassica rapa Bra006285 I
Bo9g165360 Brassica oleracea Bo9g165360 I
Bo8g097390 Brassica oleracea Bo8g097390 I
Bo4g100070 Brassica oleracea Bo4g100070 I
Bo3g010120 Brassica oleracea Bo3g010120 I
Bo3g002560 Brassica oleracea Bo3g002560 I
Bo2g012410 Brassica oleracea Bo2g012410 I
Bo2g005230 Brassica oleracea Bo2g005230 I
HAT7 Arabidopsis thaliana AT5G15150 I
AMTR_s00027p00144540 Amborella trichopoda AMTR_s00027p00144540 I
POPTR_0017s11800 Populus trichocarpa POPTR_0017s11800 I
VIT_18s0001g06430 Vitis vinifera VIT_18s0001g06430 I
VIT_16s0098g01170 Vitis vinifera VIT_16s0098g01170 I
TCM_018470 Theobroma cacao TCM_018470 I
Solyc09g008810.2 Solanum lycopersicum Solyc09g008810.2 I
Solyc06g053220.2 Solanum lycopersicum Solyc06g053220.2 I
Solyc03g082550.2 Solanum lycopersicum Solyc03g082550.2 I
Solyc02g077590.1 Solanum lycopersicum Solyc02g077590.1 I
Si030983m.g Setaria italica Si030983m.g I
Sb02g030660 Sorghum bicolor Sb02g030660 I
PRUPE_ppa020465mg Prunus persica PRUPE_ppa020465mg I
PRUPE_ppa010647mg Prunus persica PRUPE_ppa010647mg I
Al_scaffold_0006_290 Arabidopsis lyrata Al_scaffold_0006_290 I
PGSC0003DMG400031777 Solanum tuberosum PGSC0003DMG400031777 I
PGSC0003DMG400018509 Solanum tuberosum PGSC0003DMG400018509 I
PGSC0003DMG400005472 Solanum tuberosum PGSC0003DMG400005472 I
PGSC0003DMG400002692 Solanum tuberosum PGSC0003DMG400002692 I
MTR_8g026960 Medicago truncatula MTR_8g026960 I
MTR_6g011610 Medicago truncatula MTR_6g011610 I
GSMUA_Achr6G36450_001 Musa acuminata GSMUA_Achr6G36450_001 I
GSMUA_Achr6G10660_001 Musa acuminata GSMUA_Achr6G10660_001 I
GSMUA_Achr4G00550_001 Musa acuminata GSMUA_Achr4G00550_001 I
GSMUA_Achr10G18860_001 Musa acuminata GSMUA_Achr10G18860_001 I