CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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A1O5_10914
(
Cladophialophora psammophila
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
A1O5_10914
T078601_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06503
M01888_2.00
Neurospora crassa
NNCCCCDCNN
NNGHGGGGNN
PBM
Weirauch et al.(2014)
pTH8898
0.816
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXJ65938
C2H2 ZF
36
58
YKCQYCNRAFSRSEHRSRHERSH
EXJ65938
C2H2 ZF
64
87
FKCQKCRSTFVRRDLLLRHDRTVH
Links
Other
C2H2 ZF
family TFs
Other
Cladophialophora psammophila
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00114p00142630
Amborella trichopoda
AMTR_s00114p00142630
I
BGIOSGA014498
Oryza indica
BGIOSGA014498
I
Bo4g197410
Brassica oleracea
Bo4g197410
I
Bra040478
Brassica rapa
Bra040478
I
BRADI5G19260
Brachypodium distachyon
BRADI5G19260
I
GLYMA02G36090
Glycine max
GLYMA02G36090
I
GLYMA03G42301
Glycine max
GLYMA03G42301
I
GLYMA07G05381
Glycine max
GLYMA07G05381
I
GLYMA10G08871
Glycine max
GLYMA10G08871
I
GLYMA16G01951
Glycine max
GLYMA16G01951
I
GLYMA19G45090
Glycine max
GLYMA19G45090
I
GRMZM2G018336
Zea mays
GRMZM2G018336
I
GRMZM2G065538
Zea mays
GRMZM2G065538
I
GSMUA_Achr1G03600_001
Musa acuminata
GSMUA_Achr1G03600_001
I
GSMUA_Achr4G26430_001
Musa acuminata
GSMUA_Achr4G26430_001
I
LPERR02G22870
Leersia perrieri
LPERR02G22870
I
MLOC_44012
Hordeum vulgare
MLOC_44012
I
MLOC_66387
Hordeum vulgare
MLOC_66387
I
MTR_7g117455
Medicago truncatula
MTR_7g117455
I
MTR_8g023990
Medicago truncatula
MTR_8g023990
I
OB01G36520
Oryza brachyantha
OB01G36520
I
OB02G35380
Oryza brachyantha
OB02G35380
I
OB05G32250
Oryza brachyantha
OB05G32250
I
OBART04G22880
Oryza barthii
OBART04G22880
I
OGLUM04G22780
Oryza glumaepatula
OGLUM04G22780
I
OLONG_000415
Oryza longistaminata
OLONG_000415
I
OLONG_010584
Oryza longistaminata
OLONG_010584
I
ONIVA04G22030
Oryza nivara
ONIVA04G22030
I
OPUNC04G20430
Oryza punctata
OPUNC04G20430
I
ORGLA04G0198400
Oryza glaberrima
ORGLA04G0198400
I
ORUFI04G24570
Oryza rufipogon
ORUFI04G24570
I
OS04G0581400
Oryza sativa
OS04G0581400
I
PGSC0003DMG400005856
Solanum tuberosum
PGSC0003DMG400005856
I
PGSC0003DMG400005857
Solanum tuberosum
PGSC0003DMG400005857
I
PGSC0003DMG400012222
Solanum tuberosum
PGSC0003DMG400012222
I
POPTR_0001s45650
Populus trichocarpa
POPTR_0001s45650
I
POPTR_0011s15270
Populus trichocarpa
POPTR_0011s15270
I
POPTR_0014s10290
Populus trichocarpa
POPTR_0014s10290
I
PRUPE_ppa019131mg
Prunus persica
PRUPE_ppa019131mg
I
PRUPE_ppa019539mg
Prunus persica
PRUPE_ppa019539mg
I
NGA4
Arabidopsis lyrata
scaffold_604140.1
I
Solyc08g013690.1
Solanum lycopersicum
Solyc08g013690.1
I
Solyc08g013700.1
Solanum lycopersicum
Solyc08g013700.1
I
Solyc08g083400.2
Solanum lycopersicum
Solyc08g083400.2
I
TCM_005014
Theobroma cacao
TCM_005014
I
TCM_015590
Theobroma cacao
TCM_015590
I
Traes_1BL_53C31B54B
Triticum aestivum
Traes_1BL_53C31B54B
I
Traes_1BL_60A56C455
Triticum aestivum
Traes_1BL_60A56C455
I
Traes_1BL_B8B4C1FB6
Triticum aestivum
Traes_1BL_B8B4C1FB6
I
Traes_1BL_F14523046
Triticum aestivum
Traes_1BL_F14523046
I
Traes_2AL_41E2E66D9
Triticum aestivum
Traes_2AL_41E2E66D9
I
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
Traes_4DL_59B1C9052
Triticum aestivum
Traes_4DL_59B1C9052
I
Traes_6AL_44AA5642C
Triticum aestivum
Traes_6AL_44AA5642C
I
Traes_6DL_359607E93
Triticum aestivum
Traes_6DL_359607E93
I
TRIUR3_24950
Triticum urartu
TRIUR3_24950
I
VIT_02s0025g03000
Vitis vinifera
VIT_02s0025g03000
I
VIT_15s0048g02370
Vitis vinifera
VIT_15s0048g02370
I
Ca_01368
Cicer arietinum
Ca_01368
I
Ca_25633
Cicer arietinum
Ca_25633
I
Cla006845
Citrullus lanatus
Cla006845
I
Cla017937
Citrullus lanatus
Cla017937
I
Pm024248
Prunus mume
Pm024248
I
30068.m002615
Ricinus communis
30068.m002615
I
30076.m004471
Ricinus communis
30076.m004471
I
cassava29779.valid.m1
Manihot esculenta
cassava29779.valid.m1
I
cassava36125.valid.m1
Manihot esculenta
cassava36125.valid.m1
I
cassava39049.m1
Manihot esculenta
cassava39049.m1
I
Cucsa.193290
Cucumis sativus
Cucsa.193290
I
Cucsa.241440
Cucumis sativus
Cucsa.241440
I
Aquca_037_00291
Aquilegia coerulea
Aquca_037_00291
I
Aquca_072_00063
Aquilegia coerulea
Aquca_072_00063
I
Bostr.7365s0004
Boechera stricta
Bostr.7365s0004
I
Cagra.0483s0046
Capsella grandiflora
Cagra.0483s0046
I
Carubv10017696m.g
Capsella rubella
Carubv10017696m.g
I
Ciclev10012008m.g
Citrus clementina
Ciclev10012008m.g
I
Ciclev10020034m.g
Citrus clementina
Ciclev10020034m.g
I
Ciclev10020450m.g
Citrus clementina
Ciclev10020450m.g
I
Eucgr.E01093
Eucalyptus grandis
Eucgr.E01093
I
Eucgr.L00348
Eucalyptus grandis
Eucgr.L00348
I
evm.TU.contig_29173.1
Carica papaya
evm.TU.contig_29173.1
I
evm.TU.supercontig_37.108
Carica papaya
evm.TU.supercontig_37.108
I
evm.TU.supercontig_57.71
Carica papaya
evm.TU.supercontig_57.71
I
gene01855-v1.0-hybrid
Fragaria vesca
gene01855-v1.0-hybrid
I
gene15627-v1.0-hybrid
Fragaria vesca
gene15627-v1.0-hybrid
I
gene18594-v1.0-hybrid
Fragaria vesca
gene18594-v1.0-hybrid
I
Gorai.001G150200
Gossypium raimondii
Gorai.001G150200
I
Gorai.003G073600
Gossypium raimondii
Gorai.003G073600
I
Gorai.007G114200
Gossypium raimondii
Gorai.007G114200
I
Gorai.008G132400
Gossypium raimondii
Gorai.008G132400
I
Gorai.008G261100
Gossypium raimondii
Gorai.008G261100
I
Lus10034276.g
Linum usitatissimum
Lus10034276.g
I
orange1.1g013565m.g
Citrus sinensis
orange1.1g013565m.g
I
orange1.1g015743m.g
Citrus sinensis
orange1.1g015743m.g
I
orange1.1g019261m.g
Citrus sinensis
orange1.1g019261m.g
I
Pavir.Ab02711
Panicum virgatum
Pavir.Ab02711
I
SapurV1A.0003s0340
Salix purpurea
SapurV1A.0003s0340
I
SapurV1A.0162s0420
Salix purpurea
SapurV1A.0162s0420
I
SapurV1A.0285s0040
Salix purpurea
SapurV1A.0285s0040
I
SapurV1A.0666s0090
Salix purpurea
SapurV1A.0666s0090
I
Thhalv10006123m.g
Eutrema salsugineum
Thhalv10006123m.g
I
PK04952.1
Cannabis sativa
PK04952.1
I
PK11025.1
Cannabis sativa
PK11025.1
I
PK21157.1
Cannabis sativa
PK21157.1
I
chr1.CM0105.800.nc
Lotus japonicus
chr1.CM0105.800.nc
I
LjT15D16.50.nc
Lotus japonicus
LjT15D16.50.nc
I
AMTR_s00018p00040300
Amborella trichopoda
AMTR_s00018p00040300
N
NGA3
Arabidopsis thaliana
AT1G01030
N
ARF31
Arabidopsis thaliana
AT2G36080
N
NGA1
Arabidopsis thaliana
AT2G46870
N
AT3G11580
Arabidopsis thaliana
AT3G11580
N
NGA2
Arabidopsis thaliana
AT3G61970
N
AT5G06250
Arabidopsis thaliana
AT5G06250
N
BGIOSGA005835
Oryza indica
BGIOSGA005835
N
BGIOSGA011738
Oryza indica
BGIOSGA011738
N
BGIOSGA022090
Oryza indica
BGIOSGA022090
N
BGIOSGA028020
Oryza indica
BGIOSGA028020
N
BGIOSGA031489
Oryza indica
BGIOSGA031489
N
Bo01079s020
Brassica oleracea
Bo01079s020
N
Bo3g001110
Brassica oleracea
Bo3g001110
N
Bo3g039420
Brassica oleracea
Bo3g039420
N
Bo4g006900
Brassica oleracea
Bo4g006900
N
Bo4g035110
Brassica oleracea
Bo4g035110
N
Bo4g099000
Brassica oleracea
Bo4g099000
N
Bo5g002790
Brassica oleracea
Bo5g002790
N
Bo6g079210
Brassica oleracea
Bo6g079210
N
Bo8g097490
Brassica oleracea
Bo8g097490
N
Bo9g176470
Brassica oleracea
Bo9g176470
N
Bra000434
Brassica rapa
Bra000434
N
Bra003482
Brassica rapa
Bra003482
N
Bra004501
Brassica rapa
Bra004501
N
Bra005301
Brassica rapa
Bra005301
N
Bra007646
Brassica rapa
Bra007646
N
Bra014415
Brassica rapa
Bra014415
N
Bra017262
Brassica rapa
Bra017262
N
Bra030497
Brassica rapa
Bra030497
N
Bra033294
Brassica rapa
Bra033294
N
BRADI1G77150
Brachypodium distachyon
BRADI1G77150
N
BRADI3G32140
Brachypodium distachyon
BRADI3G32140
N
F775_04153
Aegilops tauschii
F775_04153
N
F775_09801
Aegilops tauschii
F775_09801
N
NGA3
Arabidopsis lyrata
fgenesh2_kg.1__134__AT1G01030.1
N
fgenesh2_kg.181__3__AT2G46870.1
Arabidopsis lyrata
fgenesh2_kg.181__3__AT2G46870.1
N
fgenesh2_kg.4__2914__AT2G46870.1
Arabidopsis lyrata
fgenesh2_kg.4__2914__AT2G46870.1
N
NGA2
Arabidopsis lyrata
fgenesh2_kg.5__2696__AT3G61970.1
N
fgenesh2_kg.6__566__AT5G06250.2
Arabidopsis lyrata
fgenesh2_kg.6__566__AT5G06250.2
N
GRMZM2G018485
Zea mays
GRMZM2G018485
N
GRMZM2G024948
Zea mays
GRMZM2G024948
N
GRMZM2G082227
Zea mays
GRMZM2G082227
N
GRMZM2G098443
Zea mays
GRMZM2G098443
N
GRMZM2G102059
Zea mays
GRMZM2G102059
N
GRMZM2G125095
Zea mays
GRMZM2G125095
N
GRMZM2G142999
Zea mays
GRMZM2G142999
N
GRMZM5G805685
Zea mays
GRMZM5G805685
N
GSMUA_Achr4G30170_001
Musa acuminata
GSMUA_Achr4G30170_001
N
GSMUA_Achr5G20340_001
Musa acuminata
GSMUA_Achr5G20340_001
N
LPERR03G01560
Leersia perrieri
LPERR03G01560
N
LPERR04G18630
Leersia perrieri
LPERR04G18630
N
LPERR06G00460
Leersia perrieri
LPERR06G00460
N
LPERR07G08550
Leersia perrieri
LPERR07G08550
N
LPERR10G12990
Leersia perrieri
LPERR10G12990
N
MLOC_47091
Hordeum vulgare
MLOC_47091
N
MLOC_74058
Hordeum vulgare
MLOC_74058
N
MTR_1g058350
Medicago truncatula
MTR_1g058350
N
OB03G11610
Oryza brachyantha
OB03G11610
N
OB10G24100
Oryza brachyantha
OB10G24100
N
OB12G13420
Oryza brachyantha
OB12G13420
N
OBART02G28100
Oryza barthii
OBART02G28100
N
OBART03G01650
Oryza barthii
OBART03G01650
N
OBART10G17010
Oryza barthii
OBART10G17010
N
OGLUM02G28660
Oryza glumaepatula
OGLUM02G28660
N
OGLUM03G01630
Oryza glumaepatula
OGLUM03G01630
N
OGLUM08G03520
Oryza glumaepatula
OGLUM08G03520
N
OGLUM10G17040
Oryza glumaepatula
OGLUM10G17040
N
OLONG_022770
Oryza longistaminata
OLONG_022770
N
OMERI03G01600
Oryza meridionalis
OMERI03G01600
N
OMERI06G00450
Oryza meridionalis
OMERI06G00450
N
OMERI10G13480
Oryza meridionalis
OMERI10G13480
N
OMERI12G01740
Oryza meridionalis
OMERI12G01740
N
ONIVA02G30750
Oryza nivara
ONIVA02G30750
N
ONIVA06G00500
Oryza nivara
ONIVA06G00500
N
ONIVA08G03420
Oryza nivara
ONIVA08G03420
N
ONIVA10G18740
Oryza nivara
ONIVA10G18740
N
ONIVA12G15340
Oryza nivara
ONIVA12G15340
N
OPUNC02G25780
Oryza punctata
OPUNC02G25780
N
OPUNC03G01540
Oryza punctata
OPUNC03G01540
N
OPUNC07G09160
Oryza punctata
OPUNC07G09160
N
OPUNC08G03290
Oryza punctata
OPUNC08G03290
N
OPUNC10G16940
Oryza punctata
OPUNC10G16940
N
OPUNC12G03300
Oryza punctata
OPUNC12G03300
N
ORGLA02G0241100
Oryza glaberrima
ORGLA02G0241100
N
ORGLA03G0014300
Oryza glaberrima
ORGLA03G0014300
N
ORGLA08G0028800
Oryza glaberrima
ORGLA08G0028800
N
ORGLA10G0119700
Oryza glaberrima
ORGLA10G0119700
N
ORUFI02G29620
Oryza rufipogon
ORUFI02G29620
N
ORUFI08G03850
Oryza rufipogon
ORUFI08G03850
N
ORUFI10G18030
Oryza rufipogon
ORUFI10G18030
N
OS02G0683500
Oryza sativa
OS02G0683500
N
OS03G0120900
Oryza sativa
OS03G0120900
N
OS08G0157700
Oryza sativa
OS08G0157700
N
OS10G0537100
Oryza sativa
OS10G0537100
N
PGSC0003DMG400008936
Solanum tuberosum
PGSC0003DMG400008936
N
POPTR_0002s18260
Populus trichocarpa
POPTR_0002s18260
N
POPTR_0016s07540
Populus trichocarpa
POPTR_0016s07540
N
PRUPE_ppa015999mg
Prunus persica
PRUPE_ppa015999mg
N
Sb01g030520
Sorghum bicolor
Sb01g030520
N
Sb01g049150
Sorghum bicolor
Sb01g049150
N
Sb04g031710
Sorghum bicolor
Sb04g031710
N
Sb06g026370
Sorghum bicolor
Sb06g026370
N
scaffold_301330.1
Arabidopsis lyrata
scaffold_301330.1
N
scaffold_402221.1
Arabidopsis lyrata
scaffold_402221.1
N
Si011823m.g
Setaria italica
Si011823m.g
N
Si020241m.g
Setaria italica
Si020241m.g
N
Si036864m.g
Setaria italica
Si036864m.g
N
Si039972m.g
Setaria italica
Si039972m.g
N
Solyc09g010230.1
Solanum lycopersicum
Solyc09g010230.1
N
TCM_022729
Theobroma cacao
TCM_022729
N
Traes_1AL_29F610E15
Triticum aestivum
Traes_1AL_29F610E15
N
Traes_2BL_439C794F5
Triticum aestivum
Traes_2BL_439C794F5
N
Traes_2DL_2D1980C7B
Triticum aestivum
Traes_2DL_2D1980C7B
N
Traes_4BL_D9784B20C1
Triticum aestivum
Traes_4BL_D9784B20C1
N
Traes_4DL_A83084AC1
Triticum aestivum
Traes_4DL_A83084AC1
N
Traes_4DL_D0F3E9568
Triticum aestivum
Traes_4DL_D0F3E9568
N
TRIUR3_01515
Triticum urartu
TRIUR3_01515
N
TRIUR3_06598
Triticum urartu
TRIUR3_06598
N
TRIUR3_29732
Triticum urartu
TRIUR3_29732
N
VIT_08s0007g02810
Vitis vinifera
VIT_08s0007g02810
N
Cla005055
Citrullus lanatus
Cla005055
N
Cla014858
Citrullus lanatus
Cla014858
N
Pm028725
Prunus mume
Pm028725
N
cassava19218.valid.m1
Manihot esculenta
cassava19218.valid.m1
N
Cucsa.106780
Cucumis sativus
Cucsa.106780
N
Cucsa.349830
Cucumis sativus
Cucsa.349830
N
mgf018965m
Mimulus guttatus
mgf018965m
N
mgf019085m
Mimulus guttatus
mgf019085m
N
mgf023769m
Mimulus guttatus
mgf023769m
N
Bostr.13129s0349
Boechera stricta
Bostr.13129s0349
N
Bostr.13158s0202
Boechera stricta
Bostr.13158s0202
N
Bostr.19424s1090
Boechera stricta
Bostr.19424s1090
N
Bostr.23794s0488
Boechera stricta
Bostr.23794s0488
N
Bostr.25993s0080
Boechera stricta
Bostr.25993s0080
N
Bostr.5325s0023
Boechera stricta
Bostr.5325s0023
N
Cagra.0050s0013
Capsella grandiflora
Cagra.0050s0013
N
Cagra.0993s0119
Capsella grandiflora
Cagra.0993s0119
N
Cagra.1655s0012
Capsella grandiflora
Cagra.1655s0012
N
Cagra.1968s0048
Capsella grandiflora
Cagra.1968s0048
N
Carubv10009540m.g
Capsella rubella
Carubv10009540m.g
N
Carubv10014376m.g
Capsella rubella
Carubv10014376m.g
N
Carubv10023656m.g
Capsella rubella
Carubv10023656m.g
N
Carubv10023925m.g
Capsella rubella
Carubv10023925m.g
N
Gorai.004G128200
Gossypium raimondii
Gorai.004G128200
N
MDP0000128295
Malus domestica
MDP0000128295
N
MDP0000138163
Malus domestica
MDP0000138163
N
MDP0000288808
Malus domestica
MDP0000288808
N
Pavir.Aa00929
Panicum virgatum
Pavir.Aa00929
N
Pavir.Ca00165
Panicum virgatum
Pavir.Ca00165
N
Pavir.Cb02052
Panicum virgatum
Pavir.Cb02052
N
Pavir.Ga00960
Panicum virgatum
Pavir.Ga00960
N
Pavir.Ia04549
Panicum virgatum
Pavir.Ia04549
N
Pavir.Ib00059
Panicum virgatum
Pavir.Ib00059
N
Pavir.J06582
Panicum virgatum
Pavir.J06582
N
Pavir.J27608
Panicum virgatum
Pavir.J27608
N
Pavir.J35382
Panicum virgatum
Pavir.J35382
N
Pavir.J38226
Panicum virgatum
Pavir.J38226
N
SapurV1A.0974s0140
Salix purpurea
SapurV1A.0974s0140
N
SapurV1A.1586s0010
Salix purpurea
SapurV1A.1586s0010
N
Thhalv10001555m.g
Eutrema salsugineum
Thhalv10001555m.g
N
Thhalv10008068m.g
Eutrema salsugineum
Thhalv10008068m.g
N
Thhalv10017156m.g
Eutrema salsugineum
Thhalv10017156m.g
N
Thhalv10021305m.g
Eutrema salsugineum
Thhalv10021305m.g
N