CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sb01g032800
(
Sorghum bicolor
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Sb01g032800
T201318_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb01g032800.1
GRAS
158
531
AEQLLNPCAAAVEASNLSRVQHLFYVLGELASFSGDATTGWPRTGCTLPAAVGPAAAATVRVPPCECPTPAFAGAEPRLFRASLIRFHEVSPWFALPNALANAAIAQAASRGGPAAEPRPLHVVDLGVSHGVQWPTLLESLTRQPGGRAPPSVRLTVAGAAATPPAPFSASPPGYDFSPHLIRYAKSINLQLAVSRAASLDSVQHGFASPPGGGEALVVCLQFRLGHASADERTEILRKVRGLNPELVVVSELDGGGDGTAAGEFTARLELLWRFLESTSAAFKGRDGDERRLLEAEAGTSVASEAAGAGKEAWRERMAAAGFEESAFGDEAVESAKSLLRKYDGGWEMSASGAAGAVALRWKGQPVSFCSLWR
Links
Other
GRAS
family TFs
Other
Sorghum bicolor
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT3G58630
Arabidopsis thaliana
AT3G58630
D
29900.m001628
Ricinus communis
29900.m001628
I
Carubv10017646m.g
Capsella rubella
Carubv10017646m.g
I
Cagra.0686s0075
Capsella grandiflora
Cagra.0686s0075
I
Bostr.20903s0103
Boechera stricta
Bostr.20903s0103
I
Aquca_021_00219
Aquilegia coerulea
Aquca_021_00219
I
mgf006505m
Mimulus guttatus
mgf006505m
I
mgf000047m
Mimulus guttatus
mgf000047m
I
Cucsa.213120
Cucumis sativus
Cucsa.213120
I
Cucsa.213110
Cucumis sativus
Cucsa.213110
I
cassava2218.valid.m1
Manihot esculenta
cassava2218.valid.m1
I
Ciclev10016016m.g
Citrus clementina
Ciclev10016016m.g
I
29814.m000741
Ricinus communis
29814.m000741
I
Cla019967
Citrullus lanatus
Cla019967
I
Cla009854
Citrullus lanatus
Cla009854
I
Cla002288
Citrullus lanatus
Cla002288
I
Ca_19877
Cicer arietinum
Ca_19877
I
Ca_00394
Cicer arietinum
Ca_00394
I
VIT_12s0028g02150
Vitis vinifera
VIT_12s0028g02150
I
VIT_08s0058g00200
Vitis vinifera
VIT_08s0058g00200
I
orange1.1g021525m.g
Citrus sinensis
orange1.1g021525m.g
I
LjSGA_058481.1
Lotus japonicus
LjSGA_058481.1
I
PK27986.1
Cannabis sativa
PK27986.1
I
Thhalv10006105m.g
Eutrema salsugineum
Thhalv10006105m.g
I
SapurV1A.0650s0110
Salix purpurea
SapurV1A.0650s0110
I
SapurV1A.0260s0280
Salix purpurea
SapurV1A.0260s0280
I
SapurV1A.0045s0480
Salix purpurea
SapurV1A.0045s0480
I
Pavir.J33948
Panicum virgatum
Pavir.J33948
I
Pavir.J11649
Panicum virgatum
Pavir.J11649
I
orange1.1g024563m.g
Citrus sinensis
orange1.1g024563m.g
I
VIT_10s0003g01300
Vitis vinifera
VIT_10s0003g01300
I
MDP0000301451
Malus domestica
MDP0000301451
I
Lus10025404.g
Linum usitatissimum
Lus10025404.g
I
Lus10015282.g
Linum usitatissimum
Lus10015282.g
I
Gorai.011G039600
Gossypium raimondii
Gorai.011G039600
I
gene29666-v1.0-hybrid
Fragaria vesca
gene29666-v1.0-hybrid
I
evm.TU.supercontig_7.72
Carica papaya
evm.TU.supercontig_7.72
I
evm.TU.supercontig_209.41
Carica papaya
evm.TU.supercontig_209.41
I
Ciclev10033792m.g
Citrus clementina
Ciclev10033792m.g
I
GLYMA13G36650
Glycine max
GLYMA13G36650
I
TCM_029695
Theobroma cacao
TCM_029695
I
MTR_2g016140
Medicago truncatula
MTR_2g016140
I
GSMUA_Achr9G06410_001
Musa acuminata
GSMUA_Achr9G06410_001
I
GSMUA_Achr9G04510_001
Musa acuminata
GSMUA_Achr9G04510_001
I
GSMUA_Achr6G26840_001
Musa acuminata
GSMUA_Achr6G26840_001
I
GSMUA_Achr5G09160_001
Musa acuminata
GSMUA_Achr5G09160_001
I
GSMUA_Achr1G27460_001
Musa acuminata
GSMUA_Achr1G27460_001
I
GSMUA_Achr1G11500_001
Musa acuminata
GSMUA_Achr1G11500_001
I
GRMZM2G157219
Zea mays
GRMZM2G157219
I
GLYMA15G08890
Glycine max
GLYMA15G08890
I
MTR_4g079960
Medicago truncatula
MTR_4g079960
I
GLYMA13G30280
Glycine max
GLYMA13G30280
I
GLYMA12G33850
Glycine max
GLYMA12G33850
I
fgenesh2_kg.5__2307__AT3G58630.1
Arabidopsis lyrata
fgenesh2_kg.5__2307__AT3G58630.1
I
BRADI2G16780
Brachypodium distachyon
BRADI2G16780
I
Bra007407
Brassica rapa
Bra007407
I
Bra003346
Brassica rapa
Bra003346
I
Bo6g075950
Brassica oleracea
Bo6g075950
I
BGIOSGA020351
Oryza indica
BGIOSGA020351
I
BGIOSGA020349
Oryza indica
BGIOSGA020349
I
Sb09g028350
Sorghum bicolor
Sb09g028350
I
PRUPE_ppa008833mg
Prunus persica
PRUPE_ppa008833mg
I
POPTR_0008s07140
Populus trichocarpa
POPTR_0008s07140
I
POPTR_0003s11850
Populus trichocarpa
POPTR_0003s11850
I
POPTR_0001s08350
Populus trichocarpa
POPTR_0001s08350
I
PGSC0003DMG400007806
Solanum tuberosum
PGSC0003DMG400007806
I
PRUPE_ppa009171mg
Prunus persica
PRUPE_ppa009171mg
I
OS05G0560600
Oryza sativa
OS05G0560600
I
ORUFI05G27490
Oryza rufipogon
ORUFI05G27490
I
Si022565m.g
Setaria italica
Si022565m.g
I
ORGLA05G0221200
Oryza glaberrima
ORGLA05G0221200
I
OPUNC05G23220
Oryza punctata
OPUNC05G23220
I
ONIVA05G26860
Oryza nivara
ONIVA05G26860
I
Solyc12g010890.1
Solanum lycopersicum
Solyc12g010890.1
I
OBART05G25610
Oryza barthii
OBART05G25610
I
OMERI02G35600
Oryza meridionalis
OMERI02G35600
I
OGLUM05G27260
Oryza glumaepatula
OGLUM05G27260
I
TCM_042467
Theobroma cacao
TCM_042467
N
Ca_02494
Cicer arietinum
Ca_02494
N
Lus10025406.g
Linum usitatissimum
Lus10025406.g
N
Lus10007273.g
Linum usitatissimum
Lus10007273.g
N
Cucsa.195790
Cucumis sativus
Cucsa.195790
N
mgf001239m
Mimulus guttatus
mgf001239m
N
GSMUA_Achr9G14340_001
Musa acuminata
GSMUA_Achr9G14340_001
N