evm.TU.supercontig_30.164 (Carica papaya)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 evm.TU.supercontig_30.164 T258222_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_30.164 MADS box 10 54

Links

Other MADS box family TFs
Other Carica papaya TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.745
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.773
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I 0.841
evm.TU.contig_35265 Carica papaya evm.TU.contig_35265 I 0.864
MDP0000846004 Malus domestica MDP0000846004 I 0.708
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.711
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I 0.814
evm.TU.contig_37084 Carica papaya evm.TU.contig_37084 I 0.826
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I 0.773
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I 0.750
evm.TU.contig_40485 Carica papaya evm.TU.contig_40485 I 0.773
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.867
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I 0.864
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I 0.778
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I 0.778
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.708
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.844
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.729
evm.TU.supercontig_1750.1 Carica papaya evm.TU.supercontig_1750.1 I 0.864
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.848
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I 0.778
evm.TU.supercontig_185.12 Carica papaya evm.TU.supercontig_185.12 I 0.822
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.778
evm.TU.supercontig_185.7 Carica papaya evm.TU.supercontig_185.7 I 0.810
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I 0.778
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.848
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.792
MDP0000925348 Malus domestica MDP0000925348 I 0.800
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.733
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.711
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.778
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.733
TCM_026842 Theobroma cacao TCM_026842 I 0.711
Ca_06495 Cicer arietinum Ca_06495 I 0.795
Ca_13275 Cicer arietinum Ca_13275 I 0.711
Pm004396 Prunus mume Pm004396 I 0.778
30199.m000879 Ricinus communis 30199.m000879 I 0.702
cassava15247.m1 Manihot esculenta cassava15247.m1 I 0.756
mgf026186m Mimulus guttatus mgf026186m I 0.727
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.711
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.733
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.778
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.867
evm.TU.contig_28089 Carica papaya evm.TU.contig_28089 I 0.822
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.955
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I 0.756
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.787
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I 0.778
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.702
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I 0.704
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.809
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.711
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.733
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I 0.767
evm.TU.supercontig_4.187 Carica papaya evm.TU.supercontig_4.187 N 0.731
evm.TU.supercontig_358.1 Carica papaya evm.TU.supercontig_358.1 N 0.745
Gorai.004G229700 Gossypium raimondii Gorai.004G229700 N 0.711
PDK_20s1688321g001 Phoenix dactylifera PDK_20s1688321g001 N 0.705
evm.TU.supercontig_34.40 Carica papaya evm.TU.supercontig_34.40 N 0.800
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N 0.766
evm.TU.supercontig_265.3 Carica papaya evm.TU.supercontig_265.3 N 0.745
evm.TU.supercontig_185.8 Carica papaya evm.TU.supercontig_185.8 N 0.717
evm.TU.supercontig_185.6 Carica papaya evm.TU.supercontig_185.6 N 0.769
evm.TU.supercontig_1256.1 Carica papaya evm.TU.supercontig_1256.1 N 0.787
evm.TU.supercontig_1169.1 Carica papaya evm.TU.supercontig_1169.1 N 0.731
evm.TU.supercontig_100.9 Carica papaya evm.TU.supercontig_100.9 N 0.711
evm.TU.supercontig_100.22 Carica papaya evm.TU.supercontig_100.22 N 0.708
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N 1.000
evm.TU.contig_35868 Carica papaya evm.TU.contig_35868 N 0.756
evm.TU.contig_35762 Carica papaya evm.TU.contig_35762 N 0.711
evm.TU.contig_28448.1 Carica papaya evm.TU.contig_28448.1 N 0.745
evm.TU.contig_25253.2 Carica papaya evm.TU.contig_25253.2 N 0.766
evm.TU.contig_25253.1 Carica papaya evm.TU.contig_25253.1 N 0.818
evm.TU.contig_25049.2 Carica papaya evm.TU.contig_25049.2 N 0.733
evm.TU.contig_24864.1 Carica papaya evm.TU.contig_24864.1 N 0.717