Eucgr.J02841 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.J02841 T286963_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.766 0.894
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.766 0.894
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.728 0.723
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.723 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.J02841.1 Myb 5 57

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRB2 Arabidopsis thaliana AT5G67580 D
Bo1g081300 Brassica oleracea Bo1g081300 I
Thhalv10010562m.g Eutrema salsugineum Thhalv10010562m.g I
Thhalv10004691m.g Eutrema salsugineum Thhalv10004691m.g I
orange1.1g020653m.g Citrus sinensis orange1.1g020653m.g I
Gorai.007G224200 Gossypium raimondii Gorai.007G224200 I
Gorai.003G030800 Gossypium raimondii Gorai.003G030800 I
Ciclev10026089m.g Citrus clementina Ciclev10026089m.g I
Carubv10026874m.g Capsella rubella Carubv10026874m.g I
Carubv10017722m.g Capsella rubella Carubv10017722m.g I
Cagra.4491s0006 Capsella grandiflora Cagra.4491s0006 I
Cagra.0342s0046 Capsella grandiflora Cagra.0342s0046 I
Bostr.6864s0256 Boechera stricta Bostr.6864s0256 I
Bostr.10273s0077 Boechera stricta Bostr.10273s0077 I 0.738
Bostr.0568s0184 Boechera stricta Bostr.0568s0184 I
Aquca_004_00181 Aquilegia coerulea Aquca_004_00181 I
cassava37744.valid.m1 Manihot esculenta cassava37744.valid.m1 I
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I
Bo3g184590 Brassica oleracea Bo3g184590 I 0.703
Bo5g077530 Brassica oleracea Bo5g077530 I
Bra029978 Brassica rapa Bra029978 I
Bra030894 Brassica rapa Bra030894 I 0.703
Bra039650 Brassica rapa Bra039650 I
TRB2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8002157 I
GSMUA_Achr2G13040_001 Musa acuminata GSMUA_Achr2G13040_001 I
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I
SELMODRAFT_49296 Selaginella moellendorffii SELMODRAFT_49296 I
SELMODRAFT_49297 Selaginella moellendorffii SELMODRAFT_49297 I
TCM_000807 Theobroma cacao TCM_000807 I
29661.m000926 Ricinus communis 29661.m000926 I
TRB3 Arabidopsis lyrata fgenesh2_kg.5__1337__AT3G49850.1 I
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N
gene10278-v1.0-hybrid Fragaria vesca gene10278-v1.0-hybrid N
evm.TU.supercontig_34.111 Carica papaya evm.TU.supercontig_34.111 N
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N
Carubv10005638m.g Capsella rubella Carubv10005638m.g N
Cagra.1225s0078 Capsella grandiflora Cagra.1225s0078 N
Bostr.7867s0654 Boechera stricta Bostr.7867s0654 N
Cucsa.147930 Cucumis sativus Cucsa.147930 N
cassava18740.valid.m1 Manihot esculenta cassava18740.valid.m1 N
cassava12533.valid.m1 Manihot esculenta cassava12533.valid.m1 N
Lus10018560.g Linum usitatissimum Lus10018560.g N
Lus10039791.g Linum usitatissimum Lus10039791.g N
MDP0000089136 Malus domestica MDP0000089136 N
MDP0000237588 Malus domestica MDP0000237588 N
MDP0000315130 Malus domestica MDP0000315130 N
SapurV1A.0048s0510 Salix purpurea SapurV1A.0048s0510 N
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N
SapurV1A.2807s0020 Salix purpurea SapurV1A.2807s0020 N
PK16281.1 Cannabis sativa PK16281.1 N
chr3.CM0711.550.nd Lotus japonicus chr3.CM0711.550.nd N
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N
AMTR_s00003p00264810 Amborella trichopoda AMTR_s00003p00264810 N
Bo1g051270 Brassica oleracea Bo1g051270 N
Bo7g111950 Brassica oleracea Bo7g111950 N
Bra026276 Brassica rapa Bra026276 N
ULT1 Arabidopsis lyrata fgenesh2_kg.7__1389__AT4G28190.1 N
GLYMA06G45180 Glycine max GLYMA06G45180 N
GLYMA12G11800 Glycine max GLYMA12G11800 N
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N
29983.m003255 Ricinus communis 29983.m003255 N
MTR_0072s0040 Medicago truncatula MTR_0072s0040 N
POPTR_0013s14170 Populus trichocarpa POPTR_0013s14170 N
POPTR_0019s13550 Populus trichocarpa POPTR_0019s13550 N
PRUPE_ppa017439mg Prunus persica PRUPE_ppa017439mg N
TCM_007971 Theobroma cacao TCM_007971 N
VIT_12s0059g01980 Vitis vinifera VIT_12s0059g01980 N
Ca_19014 Cicer arietinum Ca_19014 N
Cla007849 Citrullus lanatus Cla007849 N
Pm015354 Prunus mume Pm015354 N