CRE08749 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE08749 T302103_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.880 0.514
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.880 0.514
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.823 0.457
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE08749 Nuclear receptor 20 91

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.823
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.880
nhr-202 Caenorhabditis elegans WBGene00019742 I 0.761
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.794
nhr-98 Caenorhabditis elegans WBGene00003688 I 0.777
nhr-110 Caenorhabditis elegans WBGene00003700 I 0.751
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.784
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.825
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.775
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.778
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.788
nhr-179 Caenorhabditis elegans WBGene00017512 I 0.797
nhr-184 Caenorhabditis elegans WBGene00018415 I 0.769
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.869
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.772
nhr-59 Caenorhabditis elegans WBGene00003649 I 0.871
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.789
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.856
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.856
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.770
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.856
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.770
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.788
L892_g2782 Steinernema scapterisci L892_g2782 I 0.797
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.859
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.759
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.829
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.826
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.895
CRE05778 Caenorhabditis remanei CRE05778 I 0.760
CBG06599 Caenorhabditis briggsae CBG06599 I 0.790
CBG06609 Caenorhabditis briggsae CBG06609 I 0.790
CBG09567 Caenorhabditis briggsae CBG09567 I 0.819
CBG19141 Caenorhabditis briggsae CBG19141 I 0.783
CBG20727 Caenorhabditis briggsae CBG20727 I 0.791
CBG20729 Caenorhabditis briggsae CBG20729 I 0.803
CBN00299 Caenorhabditis brenneri CBN00299 I 0.871
CBN03087 Caenorhabditis brenneri CBN03087 I 0.763
CBN18082 Caenorhabditis brenneri CBN18082 I 0.877
CBN23838 Caenorhabditis brenneri CBN23838 I 0.802
CBG06387 Caenorhabditis briggsae CBG06387 I 0.852
CJA03572 Caenorhabditis japonica CJA03572 I 0.759
CJA19466 Caenorhabditis japonica CJA19466 I 0.875
CBG01353 Caenorhabditis briggsae CBG01353 I 0.775
CRE08753 Caenorhabditis remanei CRE08753 I 0.821
CRE08754 Caenorhabditis remanei CRE08754 I 0.855
CRE08755 Caenorhabditis remanei CRE08755 I 0.813
CRE14845 Caenorhabditis remanei CRE14845 I 0.796
CRE14847 Caenorhabditis remanei CRE14847 I 0.769
CRE14848 Caenorhabditis remanei CRE14848 I 0.756
CRE15644 Caenorhabditis remanei CRE15644 I 0.802
CRE15675 Caenorhabditis remanei CRE15675 I 0.803
CRE18699 Caenorhabditis remanei CRE18699 I 0.812
CRE30948 Caenorhabditis remanei CRE30948 I 0.830
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.776
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.797
CBG01234 Caenorhabditis briggsae CBG01234 N 0.817
nhr-275 Caenorhabditis elegans WBGene00021163 N 0.795
CRE08750 Caenorhabditis remanei CRE08750 N 0.858
CBG01233 Caenorhabditis briggsae CBG01233 N 0.861