Pavir.Ca00949 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.Ca00949 T356700_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.898 0.915
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.898 0.915
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.898 0.915
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.897 0.932
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.897 0.932
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.894 0.915
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.894 0.915
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.894 0.915
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.894 0.915
WRKY21
M02553_2.00 		Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7422 		0.809 0.576
WRKY21
M07389_2.00 		Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a 		0.809 0.576
WRKY21
M07390_2.00 		Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_col 		0.809 0.576
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca00949.1.p WRKY 338 396

Links

Other WRKY family TFs
Other Panicum virgatum TFs

670 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-1 Caenorhabditis elegans WBGene00003600 D
WUBG_08038 Wuchereria bancrofti WUBG_08038 I
Bm5319 Brugia malayi Bm5319 I
Bm5520 Brugia malayi Bm5520 I
CBG00093 Caenorhabditis briggsae CBG00093 I
CBG01866 Caenorhabditis briggsae CBG01866 I
CBG02077 Caenorhabditis briggsae CBG02077 I
CBG09380 Caenorhabditis briggsae CBG09380 I
CBG10857 Caenorhabditis briggsae CBG10857 I
CBG16594 Caenorhabditis briggsae CBG16594 I
CBG23318 Caenorhabditis briggsae CBG23318 I
CBG23319 Caenorhabditis briggsae CBG23319 I
CBN07240 Caenorhabditis brenneri CBN07240 I
CBN19235 Caenorhabditis brenneri CBN19235 I
CBN20518 Caenorhabditis brenneri CBN20518 I
CBN21115 Caenorhabditis brenneri CBN21115 I
CBN30215 Caenorhabditis brenneri CBN30215 I
CJA00680 Caenorhabditis japonica CJA00680 I
CJA01292 Caenorhabditis japonica CJA01292 I
CJA06153 Caenorhabditis japonica CJA06153 I
CJA13458 Caenorhabditis japonica CJA13458 I
CJA37776 Caenorhabditis japonica CJA37776 I
CRE00606 Caenorhabditis remanei CRE00606 I
CRE03310 Caenorhabditis remanei CRE03310 I
CRE07549 Caenorhabditis remanei CRE07549 I
CRE24074 Caenorhabditis remanei CRE24074 I
CRE25378 Caenorhabditis remanei CRE25378 I
CRE26981 Caenorhabditis remanei CRE26981 I
CRE26982 Caenorhabditis remanei CRE26982 I
LOAG_00300 Loa loa LOAG_00300 I
LOAG_03407 Loa loa LOAG_03407 I
LOAG_16377 Loa loa LOAG_16377 I
Ppa-nhr-120 Pristionchus pacificus PPA00183 I
PPA16374 Pristionchus pacificus PPA16374 I
PPA20196 Pristionchus pacificus PPA20196 I
PPA24481 Pristionchus pacificus PPA24481 I
Ppa-nhr-3 Pristionchus pacificus PPA28597 I
nhr-10 Caenorhabditis elegans WBGene00003609 I
nhr-17 Caenorhabditis elegans WBGene00003616 I
nhr-40 Caenorhabditis elegans WBGene00003630 I
nhr-68 Caenorhabditis elegans WBGene00003658 I
nhr-101 Caenorhabditis elegans WBGene00003691 I
nhr-173 Caenorhabditis elegans WBGene00016975 I
WBGene00240403 Onchocerca volvulus WBGene00240403 I
WBGene00240723 Onchocerca volvulus WBGene00240723 I
WBGene00241993 Onchocerca volvulus WBGene00241993 I
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I
ACOC_0000048701 Angiostrongylus costaricensis ACOC_0000048701 I
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I
ACOC_0000744201 Angiostrongylus costaricensis ACOC_0000744201 I
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I
ANCCAN_19046 Ancylostoma caninum ANCCAN_19046 I
ANCCAN_24419 Ancylostoma caninum ANCCAN_24419 I
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I
ANCDUO_17367 Ancylostoma duodenale ANCDUO_17367 I
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I
ASU_02770 Ascaris suum ASU_02770 I
ASU_03657 Ascaris suum ASU_03657 I
ASU_10584 Ascaris suum ASU_10584 I
ASU_12501 Ascaris suum ASU_12501 I
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I
BTMF_0000941401 Brugia timori BTMF_0000941401 I
BTMF_0001127801 Brugia timori BTMF_0001127801 I
BTMF_0001388101 Brugia timori BTMF_0001388101 I
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I
DICVIV_12420 Dictyocaulus viviparus DICVIV_12420 I
DICVIV_13545 Dictyocaulus viviparus DICVIV_13545 I
DME_0000693601 Dracunculus medinensis DME_0000693601 I
DME_0001010101 Dracunculus medinensis DME_0001010101 I
EEL_0000987201 Elaeophora elaphi EEL_0000987201 I
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I
HCOI00052900 Haemonchus contortus HCOI00052900 I
HCOI00601000 Haemonchus contortus HCOI00601000 I
HCOI00618700 Haemonchus contortus HCOI00618700 I
HCOI01525900 Haemonchus contortus HCOI01525900 I
HCOI01554200 Haemonchus contortus HCOI01554200 I
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I
L596_g12276 Steinernema carpocapsae L596_g12276 I
L596_g12321 Steinernema carpocapsae L596_g12321 I
L596_g14199 Steinernema carpocapsae L596_g14199 I
L596_g19151 Steinernema carpocapsae L596_g19151 I
L596_g23777 Steinernema carpocapsae L596_g23777 I
L596_g702 Steinernema carpocapsae L596_g702 I
L889_g1557 Steinernema feltiae L889_g1557 I
L889_g22901 Steinernema feltiae L889_g22901 I
L889_g29879 Steinernema feltiae L889_g29879 I
L889_g7780 Steinernema feltiae L889_g7780 I
L889_g8914 Steinernema feltiae L889_g8914 I
L892_g4169 Steinernema scapterisci L892_g4169 I
L892_g5067 Steinernema scapterisci L892_g5067 I
L892_g5079 Steinernema scapterisci L892_g5079 I
L892_g8671 Steinernema scapterisci L892_g8671 I
L893_g15045 Steinernema glaseri L893_g15045 I
L893_g15276 Steinernema glaseri L893_g15276 I
L893_g22683 Steinernema glaseri L893_g22683 I
L893_g25227 Steinernema glaseri L893_g25227 I
L893_g28857 Steinernema glaseri L893_g28857 I
L893_g3010 Steinernema glaseri L893_g3010 I
L898_g22454 Steinernema monticolum L898_g22454 I
L898_g2764 Steinernema monticolum L898_g2764 I
L898_g30390 Steinernema monticolum L898_g30390 I
L898_g8573 Steinernema monticolum L898_g8573 I
L898_g9866 Steinernema monticolum L898_g9866 I
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I
nAv.1.0.1.g02923 Acanthocheilonema viteae nAv.1.0.1.g02923 I
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I
NECAME_00872 Necator americanus NECAME_00872 I
NECAME_01070 Necator americanus NECAME_01070 I
NECAME_01944 Necator americanus NECAME_01944 I
NECAME_06702 Necator americanus NECAME_06702 I
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I
nOo.2.0.1.g03355 Onchocerca ochengi nOo.2.0.1.g03355 I
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I
PEQ_0000894301 Parascaris equorum PEQ_0000894301 I
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I
scaffold584-EXSNAP2012.2 Pristionchus exspectatus scaffold584-EXSNAP2012.2 I
scaffold726-EXSNAP2012.5 Pristionchus exspectatus scaffold726-EXSNAP2012.5 I
SMUV_0000230901 Syphacia muris SMUV_0000230901 I
SMUV_0000475001 Syphacia muris SMUV_0000475001 I
SMUV_0000657401 Syphacia muris SMUV_0000657401 I
SMUV_0000708401 Syphacia muris SMUV_0000708401 I
SMUV_0000795201 Syphacia muris SMUV_0000795201 I
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I
TELCIR_00491 Teladorsagia circumcincta TELCIR_00491 I
L889_g22425 Steinernema feltiae L889_g22425 N