Solyc11g061750.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc11g061750.1 T005543_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.878 0.856
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.878 0.856
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.847 0.837
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.847 0.837
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.835 0.827
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.835 0.827
AIL7
M06688_2.00 		Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG		 Dap-seq
OMalley et al.(2016)
AIL7_col_a 		0.823 0.837
AIL7
M06689_2.00 		Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH		 Dap-seq
OMalley et al.(2016)
AIL7_colamp_a 		0.823 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc11g061750.1.1 AP2 179 236
Solyc11g061750.1.1 AP2 278 330

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

525 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29648.m001978 Ricinus communis 29648.m001978 I
29782.m000119 Ricinus communis 29782.m000119 I
AGL20 Arabidopsis lyrata scaffold_403512.1 I
AMTR_s00001p00217560 Amborella trichopoda AMTR_s00001p00217560 I
AMTR_s00001p00266470 Amborella trichopoda AMTR_s00001p00266470 I
AMTR_s00066p00109320 Amborella trichopoda AMTR_s00066p00109320 I
AMTR_s00089p00081270 Amborella trichopoda AMTR_s00089p00081270 I
AP3 Arabidopsis thaliana AT3G54340 D
AP3 Arabidopsis lyrata fgenesh2_kg.5__1825__AT3G54340.1 I
AP3 Populus trichocarpa POPTR_0002s02990 I
AP3 Vitis vinifera VIT_18s0001g13460 I
Aquca_006_00072 Aquilegia coerulea Aquca_006_00072 I
Aquca_006_00074 Aquilegia coerulea Aquca_006_00074 I
Aquca_007_00336 Aquilegia coerulea Aquca_007_00336 I
BGIOSGA020546 Oryza indica BGIOSGA020546 I
Bo1g157450 Brassica oleracea Bo1g157450 I
Bo3g038880 Brassica oleracea Bo3g038880 I
Bo4g120010 Brassica oleracea Bo4g120010 I
Bo4g195720 Brassica oleracea Bo4g195720 I
Bo5g152700 Brassica oleracea Bo5g152700 I
Bo8g083600 Brassica oleracea Bo8g083600 I
Bostr.0697s0046 Boechera stricta Bostr.0697s0046 I
Bostr.12659s0367 Boechera stricta Bostr.12659s0367 I
Bostr.1460s0147 Boechera stricta Bostr.1460s0147 I
Bostr.25993s0208 Boechera stricta Bostr.25993s0208 I
Bra000393 Brassica rapa Bra000393 I
Bra007067 Brassica rapa Bra007067 I
Bra014822 Brassica rapa Bra014822 I
Bra021470 Brassica rapa Bra021470 I
Bra039170 Brassica rapa Bra039170 I
Bra039324 Brassica rapa Bra039324 I
BRADI1G35000 Brachypodium distachyon BRADI1G35000 I
Cagra.0050s0134 Capsella grandiflora Cagra.0050s0134 I
Cagra.0562s0025 Capsella grandiflora Cagra.0562s0025 I
Cagra.1194s0071 Capsella grandiflora Cagra.1194s0071 I
Cagra.6677s0007 Capsella grandiflora Cagra.6677s0007 I
CAL Arabidopsis thaliana AT1G26310 I
CAL Arabidopsis lyrata scaffold_102909.1 I
Carubv10011954m.g Capsella rubella Carubv10011954m.g I
Carubv10014470m.g Capsella rubella Carubv10014470m.g I
Carubv10018833m.g Capsella rubella Carubv10018833m.g I
Carubv10024046m.g Capsella rubella Carubv10024046m.g I
cassava1567.valid.m1 Manihot esculenta cassava1567.valid.m1 I
cassava21176.m1 Manihot esculenta cassava21176.m1 I
cassava32003.m1 Manihot esculenta cassava32003.m1 I
cassava33649.m1 Manihot esculenta cassava33649.m1 I
cassava33721.m1 Manihot esculenta cassava33721.m1 I
cassava37821.valid.m1 Manihot esculenta cassava37821.valid.m1 I
cassava37822.valid.m1 Manihot esculenta cassava37822.valid.m1 I
cassava41235.m1 Manihot esculenta cassava41235.m1 I
Ca_01994 Cicer arietinum Ca_01994 I
Ca_03887 Cicer arietinum Ca_03887 I
Ca_04909 Cicer arietinum Ca_04909 I
Ca_13111 Cicer arietinum Ca_13111 I
chr1.CM0195.210.nc Lotus japonicus chr1.CM0195.210.nc I
chr2.CM0249.370.nd Lotus japonicus chr2.CM0249.370.nd I
chr4.CM0046.610.nc Lotus japonicus chr4.CM0046.610.nc I
chr4.CM0126.630.nc Lotus japonicus chr4.CM0126.630.nc I
Ciclev10002410m.g Citrus clementina Ciclev10002410m.g I
Ciclev10002422m.g Citrus clementina Ciclev10002422m.g I
Ciclev10002471m.g Citrus clementina Ciclev10002471m.g I
Ciclev10009338m.g Citrus clementina Ciclev10009338m.g I
Ciclev10026433m.g Citrus clementina Ciclev10026433m.g I
Ciclev10026457m.g Citrus clementina Ciclev10026457m.g I
Cla021117 Citrullus lanatus Cla021117 I
Cla023547 Citrullus lanatus Cla023547 I
Cucsa.018420 Cucumis sativus Cucsa.018420 I
Cucsa.342790 Cucumis sativus Cucsa.342790 I
estExt_fgenesh1_pg.C_1180093 Physcomitrella patens estExt_fgenesh1_pg.C_1180093 I
estExt_fgenesh1_pm.C_80015 Physcomitrella patens estExt_fgenesh1_pm.C_80015 I
estExt_gwp_gw1.C_1630046 Physcomitrella patens estExt_gwp_gw1.C_1630046 I
estExt_gwp_gw1.C_900087 Physcomitrella patens estExt_gwp_gw1.C_900087 I
Eucgr.E01006 Eucalyptus grandis Eucgr.E01006 I
Eucgr.E01007 Eucalyptus grandis Eucgr.E01007 I
Eucgr.F01615 Eucalyptus grandis Eucgr.F01615 I
Eucgr.I02376 Eucalyptus grandis Eucgr.I02376 I
evm.TU.supercontig_18.166 Carica papaya evm.TU.supercontig_18.166 I
evm.TU.supercontig_26.316 Carica papaya evm.TU.supercontig_26.316 I
evm.TU.supercontig_6.199 Carica papaya evm.TU.supercontig_6.199 I
evm.TU.supercontig_6.202 Carica papaya evm.TU.supercontig_6.202 I
e_gw1.55.5.1 Physcomitrella patens e_gw1.55.5.1 I
F775_30609 Aegilops tauschii F775_30609 I
FBP1_PETHY Petunia x hybrida FBP1_PETHY D
fgenesh1_pg.scaffold_163000049 Physcomitrella patens fgenesh1_pg.scaffold_163000049 I
gene11267-v1.0-hybrid Fragaria vesca gene11267-v1.0-hybrid I
gene11268-v1.0-hybrid Fragaria vesca gene11268-v1.0-hybrid I
gene14896-v1.0-hybrid Fragaria vesca gene14896-v1.0-hybrid I
gene24852-v1.0-hybrid Fragaria vesca gene24852-v1.0-hybrid I
GLYMA01G37470 Glycine max GLYMA01G37470 I
GLYMA04G02980 Glycine max GLYMA04G02980 I
GLYMA04G42420 Glycine max GLYMA04G42420 I
GLYMA04G43640 Glycine max GLYMA04G43640 I
GLYMA06G02990 Glycine max GLYMA06G02990 I
GLYMA06G12380 Glycine max GLYMA06G12380 I
GLYMA11G07820 Glycine max GLYMA11G07820 I
GLYMA13G09660 Glycine max GLYMA13G09660 I
GLYMA14G24590 Glycine max GLYMA14G24590 I
Gorai.002G223100 Gossypium raimondii Gorai.002G223100 I
Gorai.003G011500 Gossypium raimondii Gorai.003G011500 I
Gorai.004G155700 Gossypium raimondii Gorai.004G155700 I
Gorai.005G087600 Gossypium raimondii Gorai.005G087600 I
Gorai.008G064900 Gossypium raimondii Gorai.008G064900 I
Gorai.009G271100 Gossypium raimondii Gorai.009G271100 I
Gorai.011G035500 Gossypium raimondii Gorai.011G035500 I
GRMZM2G055782 Zea mays GRMZM2G055782 I
GRMZM2G139073 Zea mays GRMZM2G139073 I
GSMUA_Achr3G23580_001 Musa acuminata GSMUA_Achr3G23580_001 I
GSMUA_Achr9G20940_001 Musa acuminata GSMUA_Achr9G20940_001 I
GSMUA_Achr9G20950_001 Musa acuminata GSMUA_Achr9G20950_001 I
LjSGA_047687.2 Lotus japonicus LjSGA_047687.2 I
LjT13A22.130.nc Lotus japonicus LjT13A22.130.nc I
LPERR04G11770 Leersia perrieri LPERR04G11770 I
LPERR06G22780 Leersia perrieri LPERR06G22780 I
Lus10010630.g Linum usitatissimum Lus10010630.g I
Lus10029719.g Linum usitatissimum Lus10029719.g I
Lus10031960.g Linum usitatissimum Lus10031960.g I
Lus10033187.g Linum usitatissimum Lus10033187.g I
Lus10042749.g Linum usitatissimum Lus10042749.g I
MADS16 Oryza sativa OS06G0712700 D
MADS2_PETHY Petunia x hybrida MADS2_PETHY D
MADS50 Oryza sativa OS03G0122600 D
MDP0000133037 Malus domestica MDP0000133037 I
MDP0000184294 Malus domestica MDP0000184294 I
MDP0000224779 Malus domestica MDP0000224779 I
MDP0000242009 Malus domestica MDP0000242009 I
MDP0000250080 Malus domestica MDP0000250080 I
MDP0000315938 Malus domestica MDP0000315938 I
MDP0000324166 Malus domestica MDP0000324166 I
mgf000046m Mimulus guttatus mgf000046m I
mgf003143m Mimulus guttatus mgf003143m I
mgf006158m Mimulus guttatus mgf006158m I
mgf008207m Mimulus guttatus mgf008207m I
mgf015533m Mimulus guttatus mgf015533m I
MLOC_31575 Hordeum vulgare MLOC_31575 I
MTR_3g088615 Medicago truncatula MTR_3g088615 I
MTR_3g113030 Medicago truncatula MTR_3g113030 I
MTR_4g102530 Medicago truncatula MTR_4g102530 I
MTR_5g021270 Medicago truncatula MTR_5g021270 I
OB03G11760 Oryza brachyantha OB03G11760 I
OB06G35020 Oryza brachyantha OB06G35020 I
OBART03G01800 Oryza barthii OBART03G01800 I
OBART06G27230 Oryza barthii OBART06G27230 I
OGLUM03G01750 Oryza glumaepatula OGLUM03G01750 I
OGLUM06G28660 Oryza glumaepatula OGLUM06G28660 I
OLONG_004226 Oryza longistaminata OLONG_004226 I
OLONG_010918 Oryza longistaminata OLONG_010918 I
OMERI03G01730 Oryza meridionalis OMERI03G01730 I
OMERI06G27290 Oryza meridionalis OMERI06G27290 I
ONIVA03G01420 Oryza nivara ONIVA03G01420 I
ONIVA06G29820 Oryza nivara ONIVA06G29820 I
OPUNC03G01630 Oryza punctata OPUNC03G01630 I
OPUNC04G12890 Oryza punctata OPUNC04G12890 I
OPUNC06G24880 Oryza punctata OPUNC06G24880 I
orange1.1g024093m.g Citrus sinensis orange1.1g024093m.g I
orange1.1g034384m.g Citrus sinensis orange1.1g034384m.g I
orange1.1g036452m.g Citrus sinensis orange1.1g036452m.g I
orange1.1g040046m.g Citrus sinensis orange1.1g040046m.g I
orange1.1g040096m.g Citrus sinensis orange1.1g040096m.g I
orange1.1g042044m.g Citrus sinensis orange1.1g042044m.g I
ORGLA03G0015400 Oryza glaberrima ORGLA03G0015400 I
ORGLA06G0229200 Oryza glaberrima ORGLA06G0229200 I
ORUFI03G01510 Oryza rufipogon ORUFI03G01510 I
ORUFI06G29170 Oryza rufipogon ORUFI06G29170 I
Pavir.Db00185 Panicum virgatum Pavir.Db00185 I
Pavir.J11672 Panicum virgatum Pavir.J11672 I
PGSC0003DMG400003541 Solanum tuberosum PGSC0003DMG400003541 I
PGSC0003DMG400003709 Solanum tuberosum PGSC0003DMG400003709 I
PGSC0003DMG400017295 Solanum tuberosum PGSC0003DMG400017295 I
PGSC0003DMG401007392 Solanum tuberosum PGSC0003DMG401007392 I
PI Vitis vinifera VIT_18s0001g01760 I
Pm004718 Prunus mume Pm004718 I
Pm006266 Prunus mume Pm006266 I
Pm010346 Prunus mume Pm010346 I
Pm018087 Prunus mume Pm018087 I
Pm026712 Prunus mume Pm026712 I
POPTR_0002s07920 Populus trichocarpa POPTR_0002s07920 I
POPTR_0005s12000 Populus trichocarpa POPTR_0005s12000 I
POPTR_0005s20480 Populus trichocarpa POPTR_0005s20480 I
POPTR_0007s13660 Populus trichocarpa POPTR_0007s13660 I
POPTR_0012s10190 Populus trichocarpa POPTR_0012s10190 I
POPTR_0013s09960 Populus trichocarpa POPTR_0013s09960 I
PRUPE_ppa010595mg Prunus persica PRUPE_ppa010595mg I
PRUPE_ppa010727mg Prunus persica PRUPE_ppa010727mg I
PRUPE_ppa012927mg Prunus persica PRUPE_ppa012927mg I
PRUPE_ppa019932mg Prunus persica PRUPE_ppa019932mg I
PRUPE_ppa026083mg Prunus persica PRUPE_ppa026083mg I
Q38742_ANTMA Antirrhinum majus Q38742_ANTMA D
Q40513_TOBAC Nicotiana tabacum Q40513_TOBAC D
Q8VWZ2_MALDO Malus domestica Q8VWZ2_MALDO D
Q8VWZ4_MALDO Malus domestica Q8VWZ4_MALDO D
Q9ATE3_PETHY Petunia x hybrida Q9ATE3_PETHY D
Q9AVU7_MALDO Malus domestica Q9AVU7_MALDO D
SapurV1A.0025s0830 Salix purpurea SapurV1A.0025s0830 I
SapurV1A.0383s0080 Salix purpurea SapurV1A.0383s0080 I
SapurV1A.0396s0210 Salix purpurea SapurV1A.0396s0210 I
SapurV1A.0569s0080 Salix purpurea SapurV1A.0569s0080 I
SapurV1A.2002s0050 Salix purpurea SapurV1A.2002s0050 I
SapurV1A.2206s0010 Salix purpurea SapurV1A.2206s0010 I
Sb10g029810 Sorghum bicolor Sb10g029810 I
SELMODRAFT_449545 Selaginella moellendorffii SELMODRAFT_449545 I
SELMODRAFT_449594 Selaginella moellendorffii SELMODRAFT_449594 I
SELMODRAFT_450804 Selaginella moellendorffii SELMODRAFT_450804 I
SELMODRAFT_450837 Selaginella moellendorffii SELMODRAFT_450837 I
SEP2 Arabidopsis thaliana AT3G02310 D
SEP2 Arabidopsis lyrata scaffold_300166.1 I
Si007221m.g Setaria italica Si007221m.g I
SOC1 Arabidopsis thaliana AT2G45660 D
Solyc02g084630.2 Solanum lycopersicum Solyc02g084630.2 I
Solyc04g081000.2 Solanum lycopersicum Solyc04g081000.2 I
Solyc06g059970.2 Solanum lycopersicum Solyc06g059970.2 I
Solyc07g055920.2 Solanum lycopersicum Solyc07g055920.2 I
Solyc08g067230.2 Solanum lycopersicum Solyc08g067230.2 I
squamosa Antirrhinum majus CAA45228.1 D
TCM_000266 Theobroma cacao TCM_000266 I
TCM_034148 Theobroma cacao TCM_034148 I
TCM_035212 Theobroma cacao TCM_035212 I
Thhalv10001632m.g Eutrema salsugineum Thhalv10001632m.g I
Thhalv10010683m.g Eutrema salsugineum Thhalv10010683m.g I
Thhalv10021390m.g Eutrema salsugineum Thhalv10021390m.g I
Traes_7AL_1C76E543C Triticum aestivum Traes_7AL_1C76E543C I
Traes_7DL_DDCC09B24 Triticum aestivum Traes_7DL_DDCC09B24 I
TRIUR3_29719 Triticum urartu TRIUR3_29719 I
TT16 Vitis vinifera VIT_01s0011g01560 I
VIT_04s0023g02820 Vitis vinifera VIT_04s0023g02820 I
VIT_15s0048g01240 Vitis vinifera VIT_15s0048g01240 I