CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_418047
(
Selaginella moellendorffii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
SELMODRAFT_418047
T044591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ20751
bHLH
130
179
QRENHILAERQRREEMNEKFTALKALLPKSTKKDKASIVGETINYVLELE
Links
Other
bHLH
family TFs
Other
Selaginella moellendorffii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
28752.m000339
Ricinus communis
28752.m000339
I
29169.m000017
Ricinus communis
29169.m000017
I
29805.m001494
Ricinus communis
29805.m001494
I
AMTR_s00035p00205430
Amborella trichopoda
AMTR_s00035p00205430
I
AMTR_s00058p00216470
Amborella trichopoda
AMTR_s00058p00216470
I
AP2
Arabidopsis thaliana
AT4G36920
I
AP2
Arabidopsis lyrata
fgenesh2_kg.7__332__AT4G36920.1
I
Aquca_007_00714
Aquilegia coerulea
Aquca_007_00714
I
Aquca_010_00628
Aquilegia coerulea
Aquca_010_00628
I
Aquca_027_00133
Aquilegia coerulea
Aquca_027_00133
I
BGIOSGA013826
Oryza indica
BGIOSGA013826
I
BGIOSGA017250
Oryza indica
BGIOSGA017250
I
BGIOSGA018911
Oryza indica
BGIOSGA018911
I
BGIOSGA020813
Oryza indica
BGIOSGA020813
I
BGIOSGA025426
Oryza indica
BGIOSGA025426
I
Bo1g004960
Brassica oleracea
Bo1g004960
I
Bo3g040110
Brassica oleracea
Bo3g040110
N
Bo4g070350
Brassica oleracea
Bo4g070350
I
Bo7g064000
Brassica oleracea
Bo7g064000
I
Bo7g118400
Brassica oleracea
Bo7g118400
I
Bostr.0568s0140
Boechera stricta
Bostr.0568s0140
I
Bostr.27991s0069
Boechera stricta
Bostr.27991s0069
N
Bostr.7867s1579
Boechera stricta
Bostr.7867s1579
I
Bra011741
Brassica rapa
Bra011741
I
Bra011939
Brassica rapa
Bra011939
I
Bra012139
Brassica rapa
Bra012139
I
Bra017809
Brassica rapa
Bra017809
I
BRADI1G30337
Brachypodium distachyon
BRADI1G30337
I
BRADI1G53650
Brachypodium distachyon
BRADI1G53650
I
BRADI2G37800
Brachypodium distachyon
BRADI2G37800
I
BRADI5G24100
Brachypodium distachyon
BRADI5G24100
I
Cagra.0342s0004
Capsella grandiflora
Cagra.0342s0004
I
Cagra.1809s0003
Capsella grandiflora
Cagra.1809s0003
I
Cagra.4909s0048
Capsella grandiflora
Cagra.4909s0048
I
Carubv10004818m.g
Capsella rubella
Carubv10004818m.g
I
Carubv10025387m.g
Capsella rubella
Carubv10025387m.g
I
Carubv10026667m.g
Capsella rubella
Carubv10026667m.g
I
cassava12358.valid.m1
Manihot esculenta
cassava12358.valid.m1
I
cassava13566.valid.m1
Manihot esculenta
cassava13566.valid.m1
I
cassava13884.valid.m1
Manihot esculenta
cassava13884.valid.m1
I
cassava2301.valid.m1
Manihot esculenta
cassava2301.valid.m1
I
cassava24954.valid.m1
Manihot esculenta
cassava24954.valid.m1
I
Ca_02499
Cicer arietinum
Ca_02499
I
Ca_09295
Cicer arietinum
Ca_09295
I
Ca_12010
Cicer arietinum
Ca_12010
I
Ca_14618
Cicer arietinum
Ca_14618
I
chr1.CM0033.300.nc
Lotus japonicus
chr1.CM0033.300.nc
I
chr3.LjT05P05.30.nd
Lotus japonicus
chr3.LjT05P05.30.nd
I
Ciclev10011588m.g
Citrus clementina
Ciclev10011588m.g
I
Ciclev10025364m.g
Citrus clementina
Ciclev10025364m.g
I
Ciclev10028259m.g
Citrus clementina
Ciclev10028259m.g
I
Ciclev10031306m.g
Citrus clementina
Ciclev10031306m.g
I
Cla000716
Citrullus lanatus
Cla000716
I
Cla013460
Citrullus lanatus
Cla013460
N
Cla018124
Citrullus lanatus
Cla018124
I
Cla018549
Citrullus lanatus
Cla018549
I
Cla020549
Citrullus lanatus
Cla020549
I
Cucsa.051660
Cucumis sativus
Cucsa.051660
I
Cucsa.065640
Cucumis sativus
Cucsa.065640
I
Cucsa.102550
Cucumis sativus
Cucsa.102550
I
Cucsa.307230
Cucumis sativus
Cucsa.307230
I
Cucsa.367290
Cucumis sativus
Cucsa.367290
I
Eucgr.B02453
Eucalyptus grandis
Eucgr.B02453
I
Eucgr.I00892
Eucalyptus grandis
Eucgr.I00892
I
Eucgr.J02113
Eucalyptus grandis
Eucgr.J02113
I
evm.TU.supercontig_114.55
Carica papaya
evm.TU.supercontig_114.55
I
evm.TU.supercontig_139.43
Carica papaya
evm.TU.supercontig_139.43
I
evm.TU.supercontig_55.116
Carica papaya
evm.TU.supercontig_55.116
I
F775_32962
Aegilops tauschii
F775_32962
I
gene18102-v1.0-hybrid
Fragaria vesca
gene18102-v1.0-hybrid
I
gene23876-v1.0-hybrid
Fragaria vesca
gene23876-v1.0-hybrid
I
gene25394-v1.0-hybrid
Fragaria vesca
gene25394-v1.0-hybrid
I
GLYMA01G39520
Glycine max
GLYMA01G39520
I
GLYMA03G33470
Glycine max
GLYMA03G33470
I
GLYMA05G18041
Glycine max
GLYMA05G18041
I
GLYMA11G15650
Glycine max
GLYMA11G15650
I
GLYMA12G07800
Glycine max
GLYMA12G07800
I
GLYMA13G40470
Glycine max
GLYMA13G40470
I
GLYMA15G04930
Glycine max
GLYMA15G04930
I
GLYMA17G18640
Glycine max
GLYMA17G18640
I
GLYMA19G36200
Glycine max
GLYMA19G36200
I
Gorai.002G251500
Gossypium raimondii
Gorai.002G251500
I
Gorai.003G025900
Gossypium raimondii
Gorai.003G025900
I
Gorai.004G002100
Gossypium raimondii
Gorai.004G002100
I
Gorai.007G215900
Gossypium raimondii
Gorai.007G215900
I
Gorai.008G077800
Gossypium raimondii
Gorai.008G077800
I
Gorai.009G104200
Gossypium raimondii
Gorai.009G104200
I
Gorai.011G106200
Gossypium raimondii
Gorai.011G106200
I
GRMZM2G160730
Zea mays
GRMZM2G160730
I
GRMZM2G174784
Zea mays
GRMZM2G174784
I
GRMZM2G176175
Zea mays
GRMZM2G176175
I
GRMZM2G416701
Zea mays
GRMZM2G416701
I
GRMZM2G700665
Zea mays
GRMZM2G700665
I
GRMZM5G862109
Zea mays
GRMZM5G862109
I
GSMUA_Achr10G03230_001
Musa acuminata
GSMUA_Achr10G03230_001
I
GSMUA_Achr11G23870_001
Musa acuminata
GSMUA_Achr11G23870_001
I
GSMUA_Achr1G09830_001
Musa acuminata
GSMUA_Achr1G09830_001
I
GSMUA_Achr1G26080_001
Musa acuminata
GSMUA_Achr1G26080_001
I
GSMUA_Achr3G13180_001
Musa acuminata
GSMUA_Achr3G13180_001
I
GSMUA_Achr3G28340_001
Musa acuminata
GSMUA_Achr3G28340_001
I
GSMUA_Achr4G06100_001
Musa acuminata
GSMUA_Achr4G06100_001
I
GSMUA_Achr5G07270_001
Musa acuminata
GSMUA_Achr5G07270_001
I
GSMUA_Achr5G29290_001
Musa acuminata
GSMUA_Achr5G29290_001
I
GSMUA_Achr6G33140_001
Musa acuminata
GSMUA_Achr6G33140_001
I
GSMUA_Achr6G34420_001
Musa acuminata
GSMUA_Achr6G34420_001
I
GSMUA_Achr8G01980_001
Musa acuminata
GSMUA_Achr8G01980_001
I
GSMUA_Achr8G18550_001
Musa acuminata
GSMUA_Achr8G18550_001
I
GSMUA_Achr8G21030_001
Musa acuminata
GSMUA_Achr8G21030_001
I
GSMUA_Achr9G03060_001
Musa acuminata
GSMUA_Achr9G03060_001
I
GSMUA_Achr9G04270_001
Musa acuminata
GSMUA_Achr9G04270_001
I
GSMUA_AchrUn_randomG10320_001
Musa acuminata
GSMUA_AchrUn_randomG10320_001
I
GSMUA_AchrUn_randomG16200_001
Musa acuminata
GSMUA_AchrUn_randomG16200_001
I
LjSGA_005424.1
Lotus japonicus
LjSGA_005424.1
I
LjT39B13.80.nc
Lotus japonicus
LjT39B13.80.nc
I
LPERR05G01420
Leersia perrieri
LPERR05G01420
I
LPERR06G18460
Leersia perrieri
LPERR06G18460
I
Lus10004990.g
Linum usitatissimum
Lus10004990.g
I
Lus10009374.g
Linum usitatissimum
Lus10009374.g
I
Lus10015055.g
Linum usitatissimum
Lus10015055.g
I
Lus10018124.g
Linum usitatissimum
Lus10018124.g
I
Lus10019331.g
Linum usitatissimum
Lus10019331.g
I
Lus10019905.g
Linum usitatissimum
Lus10019905.g
I
Lus10023165.g
Linum usitatissimum
Lus10023165.g
I
Lus10026477.g
Linum usitatissimum
Lus10026477.g
I
Lus10036141.g
Linum usitatissimum
Lus10036141.g
I
Lus10041595.g
Linum usitatissimum
Lus10041595.g
I
MDP0000137561
Malus domestica
MDP0000137561
I
MDP0000163645
Malus domestica
MDP0000163645
I
MDP0000181606
Malus domestica
MDP0000181606
I
MDP0000200319
Malus domestica
MDP0000200319
I
mgf005133m
Mimulus guttatus
mgf005133m
I
mgf009315m
Mimulus guttatus
mgf009315m
I
mgf010466m
Mimulus guttatus
mgf010466m
I
mgf021945m
Mimulus guttatus
mgf021945m
I
MLOC_43041
Hordeum vulgare
MLOC_43041
I
MLOC_43575
Hordeum vulgare
MLOC_43575
I
MTR_2g093060
Medicago truncatula
MTR_2g093060
I
MTR_4g061200
Medicago truncatula
MTR_4g061200
I
MTR_4g094868
Medicago truncatula
MTR_4g094868
I
MTR_5g016810
Medicago truncatula
MTR_5g016810
I
MTR_7g100590
Medicago truncatula
MTR_7g100590
I
OB03G45870
Oryza brachyantha
OB03G45870
I
OB06G29960
Oryza brachyantha
OB06G29960
I
OBART07G08110
Oryza barthii
OBART07G08110
I
OGLUM03G38790
Oryza glumaepatula
OGLUM03G38790
I
OGLUM04G27380
Oryza glumaepatula
OGLUM04G27380
I
OGLUM05G01570
Oryza glumaepatula
OGLUM05G01570
N
OGLUM06G23380
Oryza glumaepatula
OGLUM06G23380
I
OGLUM07G07330
Oryza glumaepatula
OGLUM07G07330
I
OLONG_021321
Oryza longistaminata
OLONG_021321
I
OLONG_026757
Oryza longistaminata
OLONG_026757
I
OMERI03G35820
Oryza meridionalis
OMERI03G35820
I
OMERI04G22900
Oryza meridionalis
OMERI04G22900
I
OMERI05G01620
Oryza meridionalis
OMERI05G01620
N
OMERI06G22190
Oryza meridionalis
OMERI06G22190
I
OMERI07G06850
Oryza meridionalis
OMERI07G06850
I
ONIVA03G25220
Oryza nivara
ONIVA03G25220
I
ONIVA03G40610
Oryza nivara
ONIVA03G40610
I
ONIVA04G25920
Oryza nivara
ONIVA04G25920
I
ONIVA05G01600
Oryza nivara
ONIVA05G01600
N
ONIVA06G26190
Oryza nivara
ONIVA06G26190
I
OPUNC03G36030
Oryza punctata
OPUNC03G36030
I
OPUNC04G24930
Oryza punctata
OPUNC04G24930
I
OPUNC05G01480
Oryza punctata
OPUNC05G01480
I
OPUNC06G19990
Oryza punctata
OPUNC06G19990
I
OPUNC07G07690
Oryza punctata
OPUNC07G07690
I
orange1.1g009943m.g
Citrus sinensis
orange1.1g009943m.g
I
orange1.1g010454m.g
Citrus sinensis
orange1.1g010454m.g
I
orange1.1g010763m.g
Citrus sinensis
orange1.1g010763m.g
I
ORGLA04G0237800
Oryza glaberrima
ORGLA04G0237800
I
ORGLA05G0015400
Oryza glaberrima
ORGLA05G0015400
I
ORGLA07G0068600
Oryza glaberrima
ORGLA07G0068600
I
ORUFI03G40640
Oryza rufipogon
ORUFI03G40640
I
ORUFI04G29120
Oryza rufipogon
ORUFI04G29120
I
ORUFI05G01620
Oryza rufipogon
ORUFI05G01620
N
ORUFI06G23930
Oryza rufipogon
ORUFI06G23930
I
ORUFI07G08180
Oryza rufipogon
ORUFI07G08180
I
OS03G0818800
Oryza sativa
OS03G0818800
I
OS05G0121600
Oryza sativa
OS05G0121600
I
OS07G0235800
Oryza sativa
OS07G0235800
I
P93632_MAIZE
Zea mays
P93632_MAIZE
D
Pavir.Ba03394
Panicum virgatum
Pavir.Ba03394
I
Pavir.Da00466
Panicum virgatum
Pavir.Da00466
I
Pavir.J11433
Panicum virgatum
Pavir.J11433
I
Pavir.J23348
Panicum virgatum
Pavir.J23348
I
Pavir.J23520
Panicum virgatum
Pavir.J23520
I
Pavir.J27340
Panicum virgatum
Pavir.J27340
I
Pavir.J37968
Panicum virgatum
Pavir.J37968
I
Pavir.J41060
Panicum virgatum
Pavir.J41060
I
PDK_20s1506731g001
Phoenix dactylifera
PDK_20s1506731g001
I
PGSC0003DMG400004006
Solanum tuberosum
PGSC0003DMG400004006
I
PGSC0003DMG400006482
Solanum tuberosum
PGSC0003DMG400006482
I
PGSC0003DMG400011046
Solanum tuberosum
PGSC0003DMG400011046
I
PGSC0003DMG400025390
Solanum tuberosum
PGSC0003DMG400025390
I
PGSC0003DMG400025479
Solanum tuberosum
PGSC0003DMG400025479
I
PGSC0003DMG400027904
Solanum tuberosum
PGSC0003DMG400027904
I
PK02403.1
Cannabis sativa
PK02403.1
I
PK07183.1
Cannabis sativa
PK07183.1
I
PK14490.1
Cannabis sativa
PK14490.1
I
Pm000974
Prunus mume
Pm000974
I
Pm002492
Prunus mume
Pm002492
I
Pm030172
Prunus mume
Pm030172
I
POPTR_0005s18400
Populus trichocarpa
POPTR_0005s18400
I
POPTR_0006s13460
Populus trichocarpa
POPTR_0006s13460
I
POPTR_0007s10780
Populus trichocarpa
POPTR_0007s10780
I
POPTR_0008s04490
Populus trichocarpa
POPTR_0008s04490
I
POPTR_0010s22320
Populus trichocarpa
POPTR_0010s22320
I
POPTR_0016s08530
Populus trichocarpa
POPTR_0016s08530
I
PRUPE_ppa003783mg
Prunus persica
PRUPE_ppa003783mg
I
PRUPE_ppa005230mg
Prunus persica
PRUPE_ppa005230mg
I
Q9XHD3_PETHY
Petunia x hybrida
Q9XHD3_PETHY
D
Q9XHD4_PETHY
Petunia x hybrida
Q9XHD4_PETHY
D
RAP2.7
Arabidopsis thaliana
AT2G28550
D
RAP2.7
Arabidopsis lyrata
fgenesh2_kg.4__825__AT2G28550.1
N
RAP2.7
Vitis vinifera
VIT_06s0004g03590
I
SapurV1A.0038s0220
Salix purpurea
SapurV1A.0038s0220
I
SapurV1A.0209s0320
Salix purpurea
SapurV1A.0209s0320
I
SapurV1A.0247s0170
Salix purpurea
SapurV1A.0247s0170
I
SapurV1A.0689s0070
Salix purpurea
SapurV1A.0689s0070
I
SapurV1A.1340s0010
Salix purpurea
SapurV1A.1340s0010
I
Sb01g003400
Sorghum bicolor
Sb01g003400
I
Sb02g007000
Sorghum bicolor
Sb02g007000
I
Sb06g030670
Sorghum bicolor
Sb06g030670
I
Sb10g025053
Sorghum bicolor
Sb10g025053
I
Si006371m.g
Setaria italica
Si006371m.g
I
Si012635m.g
Setaria italica
Si012635m.g
I
Si025305m.g
Setaria italica
Si025305m.g
I
Si029636m.g
Setaria italica
Si029636m.g
I
Si036068m.g
Setaria italica
Si036068m.g
I
Solyc02g064960.2
Solanum lycopersicum
Solyc02g064960.2
I
Solyc02g093150.2
Solanum lycopersicum
Solyc02g093150.2
I
Solyc03g044300.2
Solanum lycopersicum
Solyc03g044300.2
I
Solyc04g049800.2
Solanum lycopersicum
Solyc04g049800.2
N
Solyc06g075510.2
Solanum lycopersicum
Solyc06g075510.2
I
Solyc09g007260.2
Solanum lycopersicum
Solyc09g007260.2
N
Solyc10g084340.1
Solanum lycopersicum
Solyc10g084340.1
I
Solyc11g072600.1
Solanum lycopersicum
Solyc11g072600.1
I
TCM_000665
Theobroma cacao
TCM_000665
I
TCM_022077
Theobroma cacao
TCM_022077
I
TCM_042000
Theobroma cacao
TCM_042000
I
TCM_043051
Theobroma cacao
TCM_043051
N
Thhalv10004742m.g
Eutrema salsugineum
Thhalv10004742m.g
I
Thhalv10016626m.g
Eutrema salsugineum
Thhalv10016626m.g
I
Thhalv10025268m.g
Eutrema salsugineum
Thhalv10025268m.g
I
TOE3
Arabidopsis thaliana
AT5G67180
I
TOE3
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002628
I
TOE3
Vitis vinifera
VIT_07s0031g00220
I
Traes_1AS_90F3120F8
Triticum aestivum
Traes_1AS_90F3120F8
I
Traes_1BS_E68807072
Triticum aestivum
Traes_1BS_E68807072
I
Traes_1DS_2BB06F54C
Triticum aestivum
Traes_1DS_2BB06F54C
I
Traes_7DL_7B0ABD21E
Triticum aestivum
Traes_7DL_7B0ABD21E
I
VIT_08s0040g03180
Vitis vinifera
VIT_08s0040g03180
I
VIT_13s0019g03550
Vitis vinifera
VIT_13s0019g03550
I