CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000004320
(
Lepisosteus oculatus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSLOCG00000004320
T060089_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Creb1
M00992_2.00
Mus musculus
NNTGACGTCV
BGACGTCANN
PBM
Mann et al.(2013)
CREB1_UM_HK
0.904
1.000
Creb1
M01806_2.00
Mus musculus
VTKACGHNN
NNDCGTMAB
PBM
Weirauch et al.(2014)
pTH5080
0.904
1.000
CREB1
M04264_2.00
Homo sapiens
NVTKACGTMABN
NVTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX
0.904
1.000
CREB1
M04258_2.00
Homo sapiens
NVTKACGTMANN
NNTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1
0.904
1.000
CREB1
M04259_2.00
Homo sapiens
NRTGACGTR
YACGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2
0.904
1.000
CREB1
M04260_2.00
Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3
0.904
1.000
CREB1
M04022_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1
0.904
1.000
CREB1
M04023_2.00
Homo sapiens
RTGACGTADB
VHTACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2
0.904
1.000
CREB1
M08066_2.00
Homo sapiens
NVTGACGTCABN
NVTGACGTCABN
ChIP-seq
Mathelier et al.(2014)
MA0018.3
0.904
1.000
CREB1
M08791_2.00
Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A
0.904
1.000
Creb1
M08824_2.00
Mus musculus
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A
0.904
1.000
CREB1
M09948_2.00
Homo sapiens
TGACGTMW
WKACGTCA
Transfac
Matys et al.(2006)
V$CREB_01
0.904
1.000
CREB1
M09949_2.00
Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV
Transfac
Matys et al.(2006)
V$CREB_02
0.904
1.000
CREB1
M09950_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q3
0.904
1.000
CREB1
M09951_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q6
0.904
1.000
CREB1
M09952_2.00
Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q2
0.904
1.000
CREB1
M09953_2.00
Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q4
0.904
1.000
CREB1
M09954_2.00
Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM
Transfac
Matys et al.(2006)
V$TAXCREB_01
0.904
1.000
CREB1
M09955_2.00
Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY
Transfac
Matys et al.(2006)
V$TAXCREB_02
0.904
1.000
Creb1
M00991_2.00
Mus musculus
NNRTGACGYVN
NBRCGTCAYNN
PBM
Mann et al.(2013)
CREB1_M_HK
0.904
1.000
CREB1
M04265_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX
0.904
1.000
CREB1
M04261_2.00
Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1
0.904
1.000
CREB1
M04262_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2
0.904
1.000
CREB1
M04263_2.00
Homo sapiens
NRTGACGYV
BRCGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3
0.904
1.000
ATF1
M08792_2.00
Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD
Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B
0.894
0.867
ATF1
M09485_2.00
Homo sapiens
NVTGACGTMA
TKACGTCABN
Misc
Heinz et al.(2010)
K562-ATF1_GSE31477
0.894
0.867
ATF1
M09956_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q3
0.894
0.867
ATF1
M09957_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6_01
0.894
0.867
ATF1
M09958_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6
0.894
0.867
Atf1
M00124_2.00
Mus musculus
NNNNDNDNNN
NNNHNHNNNN
PBM
Badis et al.(2009)
Atf1_3026
0.883
0.867
Atf1
M01804_2.00
Mus musculus
RTGACGTV
BACGTCAY
PBM
Weirauch et al.(2014)
pTH5005
0.883
0.867
Atf1
M08820_2.00
Mus musculus
VTGACGTSAV
BTSACGTCAB
Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B
0.883
0.867
Crem
M01821_2.00
Mus musculus
NRTKACGTMN
NKACGTMAYN
PBM
Weirauch et al.(2014)
pTH5002
0.882
0.950
Crem
M08845_2.00
Mus musculus
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C
0.882
0.950
CREM
M04229_2.00
Homo sapiens
VVTBACGTVABN
NVTBACGTVABB
SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX
0.851
0.767
CREM
M08784_2.00
Homo sapiens
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C
0.851
0.767
CREM
M09930_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6_01
0.851
0.767
CREM
M09931_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6
0.851
0.767
CREM
M04230_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX
0.851
0.767
CrebB-17A
M03659_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_1
0.819
0.800
CrebB-17A
M03660_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_2
0.819
0.800
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000005158
bZIP
291
350
EAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKS
Links
Other
bZIP
family TFs
Other
Lepisosteus oculatus
TFs
360 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30111.m000703
Ricinus communis
30111.m000703
I
AC214648.3_FG005
Zea mays
AC214648.3_FG005
I
AMTR_s00080p00153120
Amborella trichopoda
AMTR_s00080p00153120
N
Aquca_027_00112
Aquilegia coerulea
Aquca_027_00112
N
BGIOSGA010952
Oryza indica
BGIOSGA010952
N
BGIOSGA018905
Oryza indica
BGIOSGA018905
I
BGIOSGA038947
Oryza indica
BGIOSGA038947
N
Bo01039s010
Brassica oleracea
Bo01039s010
N
Bo3g040220
Brassica oleracea
Bo3g040220
N
Bo4g165420
Brassica oleracea
Bo4g165420
N
Bo5g008590
Brassica oleracea
Bo5g008590
N
Bo8g112780
Brassica oleracea
Bo8g112780
N
Bostr.25219s0157
Boechera stricta
Bostr.25219s0157
N
Bostr.27991s0074
Boechera stricta
Bostr.27991s0074
N
Bra000491
Brassica rapa
Bra000491
N
Bra011942
Brassica rapa
Bra011942
N
Bra018675
Brassica rapa
Bra018675
N
Bra031599
Brassica rapa
Bra031599
N
Bra035698
Brassica rapa
Bra035698
N
BRADI1G65760
Brachypodium distachyon
BRADI1G65760
N
Cagra.1671s0410
Capsella grandiflora
Cagra.1671s0410
N
Cagra.9128s0007
Capsella grandiflora
Cagra.9128s0007
N
Carubv10010390m.g
Capsella rubella
Carubv10010390m.g
N
Carubv10023989m.g
Capsella rubella
Carubv10023989m.g
N
cassava11218.m1
Manihot esculenta
cassava11218.m1
I
cassava16668.m1
Manihot esculenta
cassava16668.m1
N
cassava40961.m1
Manihot esculenta
cassava40961.m1
I
cassava44959.m1
Manihot esculenta
cassava44959.m1
N
cassava819.valid.m1
Manihot esculenta
cassava819.valid.m1
I
Ca_02507
Cicer arietinum
Ca_02507
N
Ca_04287
Cicer arietinum
Ca_04287
I
Ca_14605
Cicer arietinum
Ca_14605
I
chr3.CM0246.260.nc
Lotus japonicus
chr3.CM0246.260.nc
N
Ciclev10029283m.g
Citrus clementina
Ciclev10029283m.g
I
Ciclev10032772m.g
Citrus clementina
Ciclev10032772m.g
I
Ciclev10033956m.g
Citrus clementina
Ciclev10033956m.g
I
Cla000556
Citrullus lanatus
Cla000556
I
Cla005133
Citrullus lanatus
Cla005133
N
Cla005134
Citrullus lanatus
Cla005134
N
Cla020379
Citrullus lanatus
Cla020379
I
CM1887.100.nc
Lotus japonicus
CM1887.100.nc
I
Cucsa.052720
Cucumis sativus
Cucsa.052720
I
Cucsa.166030
Cucumis sativus
Cucsa.166030
N
Cucsa.207390
Cucumis sativus
Cucsa.207390
N
Cucsa.207400
Cucumis sativus
Cucsa.207400
N
Cucsa.275710
Cucumis sativus
Cucsa.275710
N
Cucsa.358620
Cucumis sativus
Cucsa.358620
N
Eucgr.B02465
Eucalyptus grandis
Eucgr.B02465
I
Eucgr.E02410
Eucalyptus grandis
Eucgr.E02410
N
Eucgr.J01123
Eucalyptus grandis
Eucgr.J01123
I
evm.TU.contig_40341.1
Carica papaya
evm.TU.contig_40341.1
I
evm.TU.contig_40341.2
Carica papaya
evm.TU.contig_40341.2
N
evm.TU.supercontig_331.6
Carica papaya
evm.TU.supercontig_331.6
I
evm.TU.supercontig_53.26
Carica papaya
evm.TU.supercontig_53.26
N
F775_02335
Aegilops tauschii
F775_02335
N
gene23226-v1.0-hybrid
Fragaria vesca
gene23226-v1.0-hybrid
N
gene25294-v1.0-hybrid
Fragaria vesca
gene25294-v1.0-hybrid
I
GLYMA10G35760
Glycine max
GLYMA10G35760
I
GLYMA11G15810
Glycine max
GLYMA11G15810
N
GLYMA12G07650
Glycine max
GLYMA12G07650
I
GLYMA13G40370
Glycine max
GLYMA13G40370
I
GLYMA15G05030
Glycine max
GLYMA15G05030
I
GLYMA20G31780
Glycine max
GLYMA20G31780
I
Gorai.001G129700
Gossypium raimondii
Gorai.001G129700
I
Gorai.004G012800
Gossypium raimondii
Gorai.004G012800
I
Gorai.006G120900
Gossypium raimondii
Gorai.006G120900
I
Gorai.010G203800
Gossypium raimondii
Gorai.010G203800
I
Gorai.012G094200
Gossypium raimondii
Gorai.012G094200
N
Gorai.012G185900
Gossypium raimondii
Gorai.012G185900
N
Gorai.013G002900
Gossypium raimondii
Gorai.013G002900
I
GRMZM2G021095
Zea mays
GRMZM2G021095
N
GRMZM2G145568
Zea mays
GRMZM2G145568
N
GRMZM2G165805
Zea mays
GRMZM2G165805
N
GSMUA_Achr10G22970_001
Musa acuminata
GSMUA_Achr10G22970_001
I
GSMUA_Achr3G17800_001
Musa acuminata
GSMUA_Achr3G17800_001
N
GSMUA_Achr4G16790_001
Musa acuminata
GSMUA_Achr4G16790_001
N
GSMUA_Achr6G33070_001
Musa acuminata
GSMUA_Achr6G33070_001
I
GSMUA_Achr7G15500_001
Musa acuminata
GSMUA_Achr7G15500_001
I
GSMUA_Achr8G09700_001
Musa acuminata
GSMUA_Achr8G09700_001
N
GSMUA_Achr9G04330_001
Musa acuminata
GSMUA_Achr9G04330_001
N
LBD1
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1000623
N
LBD11
Arabidopsis thaliana
AT2G28500
N
LBD11
Arabidopsis lyrata
fgenesh2_kg.4__820__AT2G28500.1
N
LPERR03G11720
Leersia perrieri
LPERR03G11720
N
LPERR05G01520
Leersia perrieri
LPERR05G01520
N
Lus10011645.g
Linum usitatissimum
Lus10011645.g
I
Lus10031191.g
Linum usitatissimum
Lus10031191.g
I
Lus10036130.g
Linum usitatissimum
Lus10036130.g
I
Lus10040373.g
Linum usitatissimum
Lus10040373.g
I
MDP0000123013
Malus domestica
MDP0000123013
I
MDP0000151784
Malus domestica
MDP0000151784
I
MDP0000218986
Malus domestica
MDP0000218986
I
MDP0000318244
Malus domestica
MDP0000318244
I
MDP0000319331
Malus domestica
MDP0000319331
I
MDP0000822986
Malus domestica
MDP0000822986
I
MDP0000879799
Malus domestica
MDP0000879799
N
mgf015666m
Mimulus guttatus
mgf015666m
N
mgf019622m
Mimulus guttatus
mgf019622m
N
mgf022524m
Mimulus guttatus
mgf022524m
N
MLOC_68570
Hordeum vulgare
MLOC_68570
N
MTR_1g095850
Medicago truncatula
MTR_1g095850
I
MTR_2g093310
Medicago truncatula
MTR_2g093310
I
MTR_4g060950
Medicago truncatula
MTR_4g060950
I
OB03G23270
Oryza brachyantha
OB03G23270
N
OB05G11740
Oryza brachyantha
OB05G11740
I
OBART03G13260
Oryza barthii
OBART03G13260
N
OBART05G01640
Oryza barthii
OBART05G01640
N
OGLUM03G13350
Oryza glumaepatula
OGLUM03G13350
N
OMERI03G12370
Oryza meridionalis
OMERI03G12370
N
OMERI05G01730
Oryza meridionalis
OMERI05G01730
N
ONIVA03G14510
Oryza nivara
ONIVA03G14510
N
ONIVA05G01850
Oryza nivara
ONIVA05G01850
I
OPUNC03G12790
Oryza punctata
OPUNC03G12790
N
OPUNC05G01600
Oryza punctata
OPUNC05G01600
N
OPUNC05G01610
Oryza punctata
OPUNC05G01610
N
orange1.1g026556m.g
Citrus sinensis
orange1.1g026556m.g
I
orange1.1g045080m.g
Citrus sinensis
orange1.1g045080m.g
I
orange1.1g047491m.g
Citrus sinensis
orange1.1g047491m.g
I
ORGLA03G0128100
Oryza glaberrima
ORGLA03G0128100
N
ORGLA05G0016500
Oryza glaberrima
ORGLA05G0016500
N
ORUFI03G13900
Oryza rufipogon
ORUFI03G13900
N
ORUFI05G01750
Oryza rufipogon
ORUFI05G01750
I
OS03G0287400
Oryza sativa
OS03G0287400
N
OS05G0123000
Oryza sativa
OS05G0123000
I
Pavir.Ca00718
Panicum virgatum
Pavir.Ca00718
I
Pavir.Ia03612
Panicum virgatum
Pavir.Ia03612
N
Pavir.Ib01336
Panicum virgatum
Pavir.Ib01336
N
Pavir.J04684
Panicum virgatum
Pavir.J04684
I
PDK_20s1376911g004
Phoenix dactylifera
PDK_20s1376911g004
I
PGSC0003DMG400004138
Solanum tuberosum
PGSC0003DMG400004138
N
PGSC0003DMG400007503
Solanum tuberosum
PGSC0003DMG400007503
I
PGSC0003DMG400025384
Solanum tuberosum
PGSC0003DMG400025384
N
PGSC0003DMG400025400
Solanum tuberosum
PGSC0003DMG400025400
I
PK17019.1
Cannabis sativa
PK17019.1
I
PK23777.1
Cannabis sativa
PK23777.1
I
PK27389.1
Cannabis sativa
PK27389.1
I
Pm000938
Prunus mume
Pm000938
I
Pm018585
Prunus mume
Pm018585
I
POPTR_0008s04350
Populus trichocarpa
POPTR_0008s04350
I
POPTR_0010s22470
Populus trichocarpa
POPTR_0010s22470
I
PRUPE_ppa011528mg
Prunus persica
PRUPE_ppa011528mg
I
PRUPE_ppa023989mg
Prunus persica
PRUPE_ppa023989mg
I
SapurV1A.0023s0430
Salix purpurea
SapurV1A.0023s0430
I
SapurV1A.0038s0110
Salix purpurea
SapurV1A.0038s0110
I
Sb01g038650
Sorghum bicolor
Sb01g038650
N
Sb09g002190
Sorghum bicolor
Sb09g002190
I
Si024430m.g
Setaria italica
Si024430m.g
N
Si037280m.g
Setaria italica
Si037280m.g
N
Solyc04g050010.1
Solanum lycopersicum
Solyc04g050010.1
N
Solyc05g048740.2
Solanum lycopersicum
Solyc05g048740.2
I
Solyc06g005090.2
Solanum lycopersicum
Solyc06g005090.2
I
Solyc06g075330.1
Solanum lycopersicum
Solyc06g075330.1
N
Solyc11g072470.1
Solanum lycopersicum
Solyc11g072470.1
I
TCM_041094
Theobroma cacao
TCM_041094
I
TCM_043081
Theobroma cacao
TCM_043081
I
Thhalv10008781m.g
Eutrema salsugineum
Thhalv10008781m.g
N
Thhalv10017165m.g
Eutrema salsugineum
Thhalv10017165m.g
N
Traes_1AS_26CB95294
Triticum aestivum
Traes_1AS_26CB95294
N
Traes_1BS_CE38938A8
Triticum aestivum
Traes_1BS_CE38938A8
N
Traes_1DS_A31FB6CB2
Triticum aestivum
Traes_1DS_A31FB6CB2
N
Traes_4AS_669BAF6C7
Triticum aestivum
Traes_4AS_669BAF6C7
N
Traes_4BL_97EDABD02
Triticum aestivum
Traes_4BL_97EDABD02
N
VIT_06s0004g03330
Vitis vinifera
VIT_06s0004g03330
I
VIT_06s0004g03350
Vitis vinifera
VIT_06s0004g03350
I
VIT_13s0019g03700
Vitis vinifera
VIT_13s0019g03700
I
VIT_13s0019g03710
Vitis vinifera
VIT_13s0019g03710
N
VIT_13s0019g03720
Vitis vinifera
VIT_13s0019g03720
N
VIT_13s0019g03750
Vitis vinifera
VIT_13s0019g03750
N
VIT_13s0019g03760
Vitis vinifera
VIT_13s0019g03760
N
VIT_13s0019g03780
Vitis vinifera
VIT_13s0019g03780
N
VIT_13s0019g03800
Vitis vinifera
VIT_13s0019g03800
N
VIT_13s0019g03810
Vitis vinifera
VIT_13s0019g03810
N
VIT_13s0019g03820
Vitis vinifera
VIT_13s0019g03820
N
VIT_13s0019g03830
Vitis vinifera
VIT_13s0019g03830
N
VIT_13s0019g03840
Vitis vinifera
VIT_13s0019g03840
N