GSMUA_Achr3G18320_001 (Musa acuminata)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 GSMUA_Achr3G18320_001 T193600_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA6
M01999_2.00 		Arabidopsis thaliana
NVRATVNDNN
NNHNBATYBN		 PBM
Weirauch et al.(2014)
pTH7317 		0.848 0.917
GATA6
M06890_2.00 		Arabidopsis thaliana
YAGATCTARAWNH
DNWTYTAGATCTR		 Dap-seq
OMalley et al.(2016)
GATA6_col200_a 		0.848 0.917
GATA7
M02004_2.00 		Arabidopsis thaliana
NNNNATNNNN
NNNNATNNNN		 PBM
Weirauch et al.(2014)
pTH7658 		0.848 0.944
GATA1
M01998_2.00 		Arabidopsis thaliana
NNNVATBNNN
NNNVATBNNN		 PBM
Weirauch et al.(2014)
pTH8144 		0.838 0.833
GATA1
M06887_2.00 		Arabidopsis thaliana
RYGRTGRTGRTGRTG
CAYCAYCAYCAYCRY		 Dap-seq
OMalley et al.(2016)
GATA1_col_a 		0.838 0.833
GATA1
M06888_2.00 		Arabidopsis thaliana
HNYAGATCYRRWYB
VRWYYRGATCTRND		 Dap-seq
OMalley et al.(2016)
GATA1_colamp_a 		0.838 0.833
Q76DY3_TOBAC
M10600_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AGP1_01 		0.833 0.778
GATA3
M02003_2.00 		Arabidopsis thaliana
NNNNGATBNN
NNVATCNNNN		 PBM
Weirauch et al.(2014)
pTH7657 		0.832 0.806
GATA10
M01994_2.00 		Arabidopsis thaliana
CAGATCTA
TAGATCTG		 PBM
Weirauch et al.(2014)
pTH7615 		0.832 0.750
GATA11
M01995_2.00 		Arabidopsis thaliana
CAGATCTH
DAGATCTG		 PBM
Weirauch et al.(2014)
pTH7486 		0.832 0.750
GATA11
M06882_2.00 		Arabidopsis thaliana
HYYAGATCYRRWWHH
DDWWYYRGATCTRRD		 Dap-seq
OMalley et al.(2016)
GATA11_col_a 		0.832 0.750
GATA4
M00727_2.00 		Arabidopsis thaliana
NNNGATCNNN
NNNGATCNNN		 PBM
Chang et al.(2013)
pTH7196 		0.830 0.778
GATA4
M06891_2.00 		Arabidopsis thaliana
HNNYRGATCYRRWYY
RRWYYRGATCYRNND		 Dap-seq
OMalley et al.(2016)
GATA4_col_a 		0.830 0.778
GATA8
M02000_2.00 		Arabidopsis thaliana
NNGATYYVN
NBRRATCNN		 PBM
Weirauch et al.(2014)
pTH7665 		0.819 0.750
GATA9
M02002_2.00 		Arabidopsis thaliana
NHAGATCTDNN
NNHAGATCTDN		 PBM
Weirauch et al.(2014)
pTH7378 		0.819 0.750
GATA12
M00863_2.00 		Arabidopsis thaliana
NNNGATBN
NVATCNNN		 PBM
Franco-Zorrilla et al.(2014)
GATA12 		0.819 0.750
GATA12
M06895_2.00 		Arabidopsis thaliana
DWWYYAGATCYRR
YYRGATCTRRWWH		 Dap-seq
OMalley et al.(2016)
GATA12_col_a 		0.819 0.750
GATA12
M06896_2.00 		Arabidopsis thaliana
YRGATCTRRWYYNDN
NHNRRWYYAGATCYR		 Dap-seq
OMalley et al.(2016)
GATA12_colamp_a 		0.819 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P18320_001 GATA 314 349

Links

Other GATA family TFs
Other Musa acuminata TFs

609 Related TFs

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Score		 Action
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29900.m001628 Ricinus communis 29900.m001628 I
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AT3G58630 Arabidopsis thaliana AT3G58630 D
BGIOSGA020349 Oryza indica BGIOSGA020349 I
BGIOSGA020351 Oryza indica BGIOSGA020351 I
Bo6g075950 Brassica oleracea Bo6g075950 I
Bostr.20903s0103 Boechera stricta Bostr.20903s0103 I
Bra003346 Brassica rapa Bra003346 I
Bra007407 Brassica rapa Bra007407 I
BRADI2G16780 Brachypodium distachyon BRADI2G16780 I
Cagra.0686s0075 Capsella grandiflora Cagra.0686s0075 I
Carubv10017646m.g Capsella rubella Carubv10017646m.g I
cassava2218.valid.m1 Manihot esculenta cassava2218.valid.m1 I
Ca_00394 Cicer arietinum Ca_00394 I
Ca_02494 Cicer arietinum Ca_02494 N
Ca_19877 Cicer arietinum Ca_19877 I
Ciclev10016016m.g Citrus clementina Ciclev10016016m.g I
Ciclev10033792m.g Citrus clementina Ciclev10033792m.g I
Cla002288 Citrullus lanatus Cla002288 I
Cla009854 Citrullus lanatus Cla009854 I
Cla019967 Citrullus lanatus Cla019967 I
Cucsa.195790 Cucumis sativus Cucsa.195790 N
Cucsa.213110 Cucumis sativus Cucsa.213110 I
Cucsa.213120 Cucumis sativus Cucsa.213120 I
evm.TU.supercontig_209.41 Carica papaya evm.TU.supercontig_209.41 I
evm.TU.supercontig_7.72 Carica papaya evm.TU.supercontig_7.72 I
fgenesh2_kg.5__2307__AT3G58630.1 Arabidopsis lyrata fgenesh2_kg.5__2307__AT3G58630.1 I
gene29666-v1.0-hybrid Fragaria vesca gene29666-v1.0-hybrid I
GLYMA12G33850 Glycine max GLYMA12G33850 I
GLYMA13G30280 Glycine max GLYMA13G30280 I
GLYMA13G36650 Glycine max GLYMA13G36650 I
GLYMA15G08890 Glycine max GLYMA15G08890 I
Gorai.011G039600 Gossypium raimondii Gorai.011G039600 I
GRMZM2G157219 Zea mays GRMZM2G157219 I
GSMUA_Achr1G11500_001 Musa acuminata GSMUA_Achr1G11500_001 I
GSMUA_Achr1G27460_001 Musa acuminata GSMUA_Achr1G27460_001 I
GSMUA_Achr5G09160_001 Musa acuminata GSMUA_Achr5G09160_001 I
GSMUA_Achr6G26840_001 Musa acuminata GSMUA_Achr6G26840_001 I
GSMUA_Achr9G04510_001 Musa acuminata GSMUA_Achr9G04510_001 I
GSMUA_Achr9G06410_001 Musa acuminata GSMUA_Achr9G06410_001 I
GSMUA_Achr9G14340_001 Musa acuminata GSMUA_Achr9G14340_001 N
LjSGA_058481.1 Lotus japonicus LjSGA_058481.1 I
Lus10007273.g Linum usitatissimum Lus10007273.g N
Lus10015282.g Linum usitatissimum Lus10015282.g I
Lus10025404.g Linum usitatissimum Lus10025404.g I
Lus10025406.g Linum usitatissimum Lus10025406.g N
MDP0000301451 Malus domestica MDP0000301451 I
mgf000047m Mimulus guttatus mgf000047m I
mgf001239m Mimulus guttatus mgf001239m N
mgf006505m Mimulus guttatus mgf006505m I
MTR_2g016140 Medicago truncatula MTR_2g016140 I
MTR_4g079960 Medicago truncatula MTR_4g079960 I
OBART05G25610 Oryza barthii OBART05G25610 I
OGLUM05G27260 Oryza glumaepatula OGLUM05G27260 I
OMERI02G35600 Oryza meridionalis OMERI02G35600 I
ONIVA05G26860 Oryza nivara ONIVA05G26860 I
OPUNC05G23220 Oryza punctata OPUNC05G23220 I
orange1.1g021525m.g Citrus sinensis orange1.1g021525m.g I
orange1.1g024563m.g Citrus sinensis orange1.1g024563m.g I
ORGLA05G0221200 Oryza glaberrima ORGLA05G0221200 I
ORUFI05G27490 Oryza rufipogon ORUFI05G27490 I
OS05G0560600 Oryza sativa OS05G0560600 I
Pavir.J11649 Panicum virgatum Pavir.J11649 I
Pavir.J33948 Panicum virgatum Pavir.J33948 I
PGSC0003DMG400007806 Solanum tuberosum PGSC0003DMG400007806 I
PK27986.1 Cannabis sativa PK27986.1 I
POPTR_0001s08350 Populus trichocarpa POPTR_0001s08350 I
POPTR_0003s11850 Populus trichocarpa POPTR_0003s11850 I
POPTR_0008s07140 Populus trichocarpa POPTR_0008s07140 I
PRUPE_ppa008833mg Prunus persica PRUPE_ppa008833mg I
PRUPE_ppa009171mg Prunus persica PRUPE_ppa009171mg I
SapurV1A.0045s0480 Salix purpurea SapurV1A.0045s0480 I
SapurV1A.0260s0280 Salix purpurea SapurV1A.0260s0280 I
SapurV1A.0650s0110 Salix purpurea SapurV1A.0650s0110 I
Sb09g028350 Sorghum bicolor Sb09g028350 I
Si022565m.g Setaria italica Si022565m.g I
Solyc12g010890.1 Solanum lycopersicum Solyc12g010890.1 I
TCM_029695 Theobroma cacao TCM_029695 I
TCM_042467 Theobroma cacao TCM_042467 N
Thhalv10006105m.g Eutrema salsugineum Thhalv10006105m.g I
VIT_08s0058g00200 Vitis vinifera VIT_08s0058g00200 I
VIT_10s0003g01300 Vitis vinifera VIT_10s0003g01300 I
VIT_12s0028g02150 Vitis vinifera VIT_12s0028g02150 I